ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1268

(R)-4'-phosphopantothenate

C352

2-iminoacetate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C300

L-3-cyclohex-2'-enylalanine

C3298

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

C3256

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

C301

dehydroprephenate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C6361

acetoacetate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C927

carbon monoxide

C335

7-epicholate

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C11715

quinolinate

C12394

6-phospho D-glucono-1,5-lactone

C7865

urea

C13895

(2,3-dihydroxybenzoyl)adenylate

C12005

(L-aspartyl)adenylate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C11483

glycolate

C12218

α-D-glucosamine 1-phosphate

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11930

N-acetylglutamyl-phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C12409

creatinine

C14111

4-pyridoxolactone

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C12192

carbonic acid

C11826

oxalosuccinate

C1325

4-amino-4-deoxychorismate

C11653

shikimate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C1538

2-C-methyl-D-erythritol 4-phosphate

C15283

poly(ribitol phosphate)

C13813

O-D-alanyl-poly(ribitol phosphate)

C12254

ethanolamine

C11772

O-phosphoethanolamine

C11773

phosphocholine

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C11800

(R)-pantothenate

C1528

2-dehydropantoate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C12364

isopentenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C12146

hydroxylamine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C1353

3-phosphooxypyruvate

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C12288

(E)-2-benzylidenesuccinyl-CoA

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C15306

2,3-didehydroadipyl-CoA

C1108

acetyl phosphate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C12325

1,4-dihydroxy-2-naphthoate

C14074

prenyl diphosphate

C4883

2-oleoylglycerol

C873

coproporphyrinogen III

C12352

(S)-dihydroorotate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C11760

prephenate

C12048

γ-L-glutamyl 5-phosphate

C12162

hydrogen peroxide

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C12178

histidinal

C12176

histidinol

C11832

orotidine 5'-phosphate

C3656

D-gluconate 6-phosphate

C11857

β-nicotinate D-ribonucleotide

C12230

formamide

C11604

thiamine diphosphate

C11479

phosphoenolpyruvate

C11539

xanthine

C9422

nicotinate adenine dinucleotide

C12164

H2

C13716

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

C1440

nigerose

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C1438

(2S)-2-isopropylmalate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C13913

N-carbamoylputrescine

C2191

carbamoyl phosphate

C6614

O-ureido-L-homoserine

C3417

(S)-3-methyl-2-oxopentanoate

C3319

4-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C13854

hydrogen selenide

C10349

glycerone phosphate

C11606

thiamine phosphate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C6444

oxaloacetate

C891

citrate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C11639

succinate semialdehyde

C12096

isochorismate

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C13627

DNA without lesion

C11802

4'-phosphopantetheine

C13723

arsenite

C1010

ammonia

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1184

5-phospho-β-D-ribosylamine

C11838

2-succinylbenzoate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C928

CO2

C12296

dimethyl sulfoxide

C15308

trimethylamine N-oxide

C8672

trimethylamine

C11543

H2O

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C12102

isobutanol

C13800

3-methylbutanol

C13801

3-methylbutanal

C13799

2-methylbutanol

C11976

2-methylbutanal

C13798

2-phenylethanol

C1102

O-acetyl-L-serine

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C12274

enol-phenylpyruvate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C446

5-hydroxyindole thiazolidine carboxylate

C14152

pyruvic oxime

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C3376

(S)-4-hydroxy-2-oxohexanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C10301

agmatine

C2179

choline

C13166

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C6708

2-iminopropanoate

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C2930

ferrichrome

C11221

sn-glycero-3-phosphocholine

C11222

sn-glycero-3-phosphoethanolamine

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C8962

nitric oxide

C2860

fluoroacetaldehyde

C11509

fluoroacetate

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C5236

chloroethylmalonyl-CoA

C5232

4-chloro-crotonyl-CoA

C5234

4-chloro-3-hydroxybutyryl-CoA

C11256

5-chloro-5-deoxy-D-ribose

C11255

5-chloro-5-deoxy-D-ribono-γ-lactone

C11281

2-chloroacetate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C10996

nicotinamide

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C4520

(25S)-3-oxocholest-4-en-26-oate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10542

androst-4-ene-3,17-dione

C6306

3-dehydrocholate

C6352

isocholate

C6358

glycocholate

C6332

cholate

C11480

phenylacetate

C5313

2-methylbutanoyl-CoA

C5314

2-methylacetoacetyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C4913

malonyl-CoA

C4922

isobutanoyl-CoA

C4937

3'-dephospho-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C4911

methylacrylyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C4901

succinyl-CoA

C5014

phenylacetyl-CoA

C5298

acetyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C6146

(2E)-octadec-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1177

propanoyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C10758

3-oxoadipyl-CoA

C2008

acetoacetyl-CoA

C6198

3-oxodecanoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C5543

ubiquinol-8

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C1867

3-demethylubiquinol-8

C12718

molybdopterin

C10614

coenzyme A

C6007

MoO2-molybdopterin cofactor

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10988

riboflavin

C10982

nicotinate

C10994

thiamine

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C4200

pyridoxal

C4985

(S)-1-pyrroline-5-carboxylate

C2107

salinosporamide A

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12668

molybdopterin adenine dinucleotide

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12678

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12674

7,8-dihydroneopterin 2',3'-cyclic phosphate

C12702

cyclic pyranopterin phosphate

C10609

7,8-dihydropteroate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C9455

guanine

C9454

adenine

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C15088

adenosine

C7785

hypoxanthine

C7743

dAMP

C7840

dGMP

C7749

dITP

C7783

dATP

C7751

dGTP

C7823

dADP

C7807

dGDP

C7747

dIDP

C7817

IDP

C7795

GDP

C7757

ADP

C7741

IMP

C7811

XMP

C7827

GMP

C7809

AMP

C7759

ITP

C7745

GTP

C7844

ATP

C13346

CDP-choline

C8755

dCMP

C8764

dTTP

C8733

dCDP

C8752

dUDP

C8732

CDP

C11481

orotate

C8720

dTDP

C8770

dUMP

C8744

dTMP

C8714

UDP

C8739

uracil

C8772

dCTP

C8761

CTP

C8724

dUTP

C8760

UTP

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7804

UDP-α-D-galactofuranose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7780

UDP-α-D-glucose

C8666

UDP-α-D-galactose

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1939

dTDP-α-D-glucose

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C2245

CMP

C2241

UMP

C9540

preQ1

C2353

daidzein

C2415

(S)-dihydrodaidzein

C2413

(3R,4S)-tetrahydrodaidzein

C2411

(S)-equol

C8089

daidzin

C13354

preQ0

C3093

urate

C15316

actinorhodin intermediate

C7404

actinorhodin

C7139

4-tyrosol

C6829

salicylaldehyde

C11409

2,3-dihydroxybenzoate

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C8490

3-methoxy-4-hydroxyphenylglycol

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C3649

benzaldehyde

C6043

4-methylphenol

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C8950

chorismate

C5596

L-aspartate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C8534

cis-aconitate

C8538

(2R)-homocitrate

C8555

cis-homoaconitate

C8531

D-threo-isocitrate

C6185

(R)-lactate

C3420

propanoate

C11517

acetate

C3421

formate

C3308

pyruvate

C3409

octanoate

C3412

decanoate

C11482

(R)-pantoate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3536

L-α-amino-ε-keto-pimelate

C5612

L-cysteine

C5573

L-tyrosine

C5643

L-asparagine

C5577

L-threonine

C12067

glycine

C5609

L-glutamine

C5579

L-serine

C5642

L-arginine

C5605

L-histidine

C5584

L-lysine

C5607

L-glutamate

C8797

D-glutamate

C8805

D-aspartate

C8799

D-alanine

C12073

L-aspartyl-4-phosphate

C3628

sarcosine

C5560

D-octopine

C5462

N-formyl-L-methionine

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C11955

O-acetyl-L-homoserine

C3402

3-phospho-L-serine

C12303

L-citrulline

C12233

L-glutamate-5-semialdehyde

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12229

O-phospho-L-homoserine

C12231

L-ornithine

C12237

L-canaline

C12227

O-succinyl-L-homoserine

C12247

L-homocysteine

C2426

S-sulfo-L-cysteine

C12245

L-homoserine

C12239

L-aspartate 4-semialdehyde

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5581

L-proline

C5583

L-methionine

C5597

L-alanine

C5603

L-isoleucine

C5588

L-leucine

C5571

L-valine

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C11443

creatine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C13266

(15Z)-tetracosenoate

C13210

oleate

C13298

(3E,5Z)-tetradecadienoate

C6379

linoleate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C5001

apo-4'-lycopenoate

C13260

phytenate

C3383

palmitate

C2040

diacetyl

C3483

formaldehyde

C3529

1-octanal

C3500

acetaldehyde

C3523

1-propanal

C3494

isobutanal

C3485

butan-1-al

C6246

(S)-lactaldehyde

C14804

phytenal

C9494

D-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2109

α-D-galactopyranose

C6134

α-L-rhamnopyranose

C6133

β-L-rhamnopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3450

ethanol

C3447

propan-1-ol

C3449

butan-1-ol

C14807

phytol

C3731

glycerol

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C3117

dioleoyl phosphatidate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5383

all-trans-octaprenyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C10874

apo-4'-lycopenal

C4375

5-deoxy-dihydrokalafungin

C4317

(S)-DNPA

C4447

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

C4387

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

C4329

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

C5841

pyochelin

C7277

dihydrokalafungin

C10693

sucrose

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C8835

β-D-fructofuranose

C7089

keto-L-rhamnulose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3124

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

C3135

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3126

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8817

L-rhamnulose 1-phosphate

C8815

α-D-galactose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C5552

5'-deoxyadenosine

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10267

pppGpp

C10288

adenylo-succinate

C10266

ppGpp

C4243

β-nicotinamide D-ribonucleotide

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C1434

D-alanyl-D-alanine

C10799

DNA with lesion

C9865

Mg-protoporphyrin

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9817

3,8-divinyl protochlorophyllide a

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9850

chlorophyllide a

C9836

protochlorophyllide a

C6624

protoheme

C2255

N2

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7121

oxygen

C7118

hydrogen sulfide

C8419

sn-glycerol 3-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6290

(S)-3-hydroxy-isobutanoate

C4734

dimethyl sulfide

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C3998

methanethiol

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C4320

H+

C4318

K+

C4328

ammonium

C11009

Mg2+

C11023

Fe2+

C11001

Mo2+

C11006

Co2+

C7036

hydrogencarbonate

C7024

thiosulfate

C7028

nitrite

C7057

molybdate

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C1689

trimethyl sulfonium