an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(3E)-2-oxopent-3-enoate

2,6-dioxo-6-phenylhexa-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

3,4-dihydroxyphenylacetaldehyde

H₂O

propynoate

prop-2-ynal

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

D-glucurono-6,3-lactone

CO₂

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

porphobilinogen

preuroporphyrinogen

α-ribazole 5'-phosphate

β-nicotinate D-ribonucleotide

5,6-dimethylbenzimidazole

hydrogen peroxide

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

2-chloroethanol

1,2-dichloroethane

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

phosphoenolpyruvate

oxaloacetate

propionamide

4-guanidinobutanoate

4-guanidinobutyramide

(indol-3-yl)acetamide

acrylate

acrylamide

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

3-dehydroshikimate

3-dehydroquinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

glycerone phosphate

orotidine 5'-phosphate

prephenate

O-acetyl-L-serine

oxalosuccinate

S-acetyldihydrolipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

L-histidinol phosphate

imidazole acetol-phosphate

anthranilate

acetoacetate

ethanolamine

D-gluconate 6-phosphate

succinate semialdehyde

3-phosphooxypyruvate

6-carboxyhex-2-enoyl-CoA

pimeloyl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

indole-3-glycol aldehyde

indole-3-glycol

2-methylbutanal

2-methylbutanol

isobutanol

5-hydroxytryptophol

3-methylbutanal

3-methylbutanol

2-phenylethanol

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

(R)-pantothenate

(R)-4'-phosphopantothenate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-methyl-2-oxopentanoate

arsenite

N-(5-phosphoribosyl)-anthranilate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

4-methyl-3-oxoadipate

scopolin

4-hydroxybenzaldehyde

cis-coumarinic acid-β-D-glucoside

4-methylumbelliferyl glucoside

citrate

α-D-glucosamine 1-phosphate

urea-1-carboxylate

6-phospho D-glucono-1,5-lactone

xanthine

carbon monoxide

lipoamide

isopentenyl diphosphate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

α-ribazole

2-C-methyl-D-erythritol 4-phosphate

coproporphyrinogen III

4-hydroxy-2-nonenal

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

4-fumaryl-acetoacetate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

thiamine phosphate

4'-phosphopantetheine

2-dehydropantoate

(S)-3-methyl-2-oxopentanoate

2-oleoylglycerol

3-deoxy-D-arabino-heptulosonate 7-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

prenyl diphosphate

histidinol

histidinal

D-erythro-imidazole-glycerol-phosphate

L-selenocystathionine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3'-phosphoadenylyl-sulfate

L-arginino-succinate

L-canavanine

canavaninosuccinate

carbamoyl phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

(R)-4'-phosphopantothenoyl-L-cysteine

(S)-dihydroorotate

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

ε-caprolactone

cyclohexanone

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

quinolinate

2-amino-2-deoxy-D-gluconate 6-phosphate

glutathione disulfide

phenylacetone

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

12-α-hydroxy-3 oxochola-4,6-dienoate

7-α,12-α-dihydroxy-3-oxochol-4-enoate

mercuriphenyl acetate

N-succinyl-L,L-2,6-diaminopimelate

lipid IV_A

lipid A disaccharide (E. coli)

hydrogen selenide

3-amino-1-hydroxyacetone 1-phosphate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

isoquinolin-2(1H)-one

isoquinoline

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoate

S-formylmycothiol

S-(hydroxymethyl)mycothiol

FK-506

31-O-desmethylFK-506

(6E)-8-hydroxylinalool

(6E)-8-oxolinalool

oxalate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

S-adenosyl 3-(methylsulfanyl)propylamine

4-amino-4-deoxychorismate

salicyl alcohol

methylsalicylate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(2E)-2-hydroxypenta-2,4-dienoate

iminodiacetate

nitrilotriacetate

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

pregn-5-ene-3,20-dione

dihydroxyacetone

carbonic acid

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

DNA without lesion

H₂

dimethyl sulfoxide

(L-threonylcarbamoyl)adenylate

chlorite

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

acetyl phosphate

4-aminobutanoate

1,5-anhydro-D-fructose

cyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

autoinducer 2

S-ribosyl-L-homocysteine

chlorate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

urea

2-dehydro-3-deoxy-D-gluconate 6-phosphate

7-epicholate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(R)-1-amino-2-propanol O-2-phosphate

dialurate

hydroxypyruvate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

lipid X

3-oxocholoyl-CoA

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

deoxycholoyl-CoA

2-amino-3-carboxymuconate-6-semialdehyde

2-iminoacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

glycolate

dehydroprephenate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

L-3-cyclohex-2'-enylalanine

N⁵-carboxyaminoimidazole ribonucleotide

glutathioselenol

selenodiglutathione

2-hydroxy-cyclohexane-1-carbonyl-CoA

2-ketocyclohexane-1-carbonyl-CoA

chloroacetaldehyde

α-D-galacturonate 1-phosphate

ammonia

L-dehydro-ascorbate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

2'-aminobiphenyl-2,3-diol

4-tyrosol

benzene

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

salicylaldehyde

2,5-dichlorophenol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

biphenyl-2,3-diol

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

protocatechuate

menaquinol-7

menaquinol-6

menaquinol-8

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

4-methylphenol

salicylate

4-aminobenzoate

benzoate

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

coumarinate

ferulate

coumarin

scopoletin

4-methylumbelliferone

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

(5Z)-tetradecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

4-trans-undecenoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

all-trans-retinyl palmitate

all-trans-retinol

all-trans-retinal

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(4R)-limonene

(3S)-linalool

(3R)-linalool

(+)-trans-carveol

geranyl diphosphate

β-carotene 15,15' epoxide

β-carotene

15,15'-dihydroxy-β-carotene

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1,2-dibutyrin

tributyrin

1-oleoyl-sn-glycerol

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

L-galactono-1,4-lactone

5-chloro-5-deoxy-D-ribono-γ-lactone

D-glucono-1,5-lactone

benzyl acetate

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

linoleoyl-CoA

α-linolenoyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

CoA-disulfide

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

acetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

malonyl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

(3S)-citryl-CoA

(2R,3S)-β-methylmalyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

trans-feruloyl-CoA

γ-linolenoyl-CoA

dihomo γ-linolenoyl-CoA

glutaryl-CoA

(E)-glutaconyl-CoA

benzoyl-CoA

phenylacetyl-CoA

choloyl-CoA

isovaleryl-CoA

2-methylbutanoyl-CoA

4-chloro-3-hydroxybutyryl-CoA

4-chloro-crotonyl-CoA

chloroethylmalonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

cerotoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(S)-malyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

D-gluconate

L-gulonate

aldehydo-L-galactonate

β-D-cellobiose

maltotriose

sucrose

α-maltose

α,α-trehalose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

1,5-anhydro-D-mannitol

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

glycolaldehyde

5-chloro-5-deoxy-D-ribose

D-xylulose

keto-D-fructose

β-D-fructofuranose

N-acetyl-β-neuraminate

N-acetyl-α-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

glycerol

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

UDP-α-D-galactose

lotaustralin

neolinustatin

linamarin

linustatin

taxiphyllin

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

UDP-α-D-glucose

dTDP-α-D-glucose

GDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-galactose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP-N-acetyl-β-neuraminate

aldehydo-D-galacturonate

a coenzyme-A group

(2E,6E)-farnesal

fluoroacetaldehyde

(R)-lactaldehyde

(S)-lactaldehyde

1-octanal

acetaldehyde

formaldehyde

1-propanal

isobutanal

butan-1-al

phytenal

methylglyoxal

(R)-acetoin

diacetyl

L-homocysteine

hippurate

acetate

orotate

(R)-pantoate

fluoroacetate

5-chloro-5-deoxy-D-ribonate

(S)-1-pyrroline-5-carboxylate

aldehydo-D-glucuronate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

palmitate

oleate

pristanate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

γ-linolenate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(3E,5Z)-tetradecadienoate

stearate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

octanoate

decanoate

(2E,6E)-farnesoate

butanoate

2-oxoglutarate

pyruvate

2-oxobutanoate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

propanoate

formate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(R)-2-hydroxyglutarate

(R)-glycerate

(S)-3-hydroxybutanoate

chorismate

L-aspartate

fumarate

succinate

(S)-malate

D-glucarate

L-α-amino-ε-keto-pimelate

L-aspartyl-4-phosphate

L-saccharopine

seleno-L-homocysteine

3-phospho-L-serine

O-acetyl-L-homoserine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

(3S)-3-hydroxy-L-aspartate

D-alanine

D-aspartate

D-glutamate

D-cysteine

D-ornithine

D-proline

D-serine

D-phenylalanine

L-histidine

L-tryptophan

L-phenylalanine

L-tyrosine

L-glutamine

glycine

L-serine

L-asparagine

L-cysteine

L-threonine

L-arginine

L-lysine

L-glutamate

L-proline

L-leucine

L-alanine

β-alanine

(S)-3-amino-2-methylpropanoate

L-citrulline

L-4-hydroxyglutamate semialdehyde

L-ornithine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homoserine

L-aspartate 4-semialdehyde

hypoglycin A

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

3-sulfino-L-alanine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-valine

L-isoleucine

L-methionine

L-cystathionine

L,L-diaminopimelate

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

acetamide

5'-deoxy-5'-fluoroadenosine

bromochloromethane

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2-chloroacetate

androsterone

pregnenolone

campest-4-en-3-one

testosterone

progesterone

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholest-dien-3-one

3,22-dioxochol-4-en-24-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

17-α-hydroxypregnenolone

3-β-hydroxyandrost-5-en-17-one

cholest-5-en-3-one

cholesterol

episterol

ergosta-5,7,24(28)-trien-3β-ol

cholate

isocholate

3-dehydrocholate

glycocholate

deoxycholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

myo-inositol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

1-octanol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

betaine aldehyde hydrate

betaine aldehyde

choline

glycine betaine

spermine

putrescine

spermidine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

methanethiol

thiocyanate

mycothiol

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

(R)-S-lactoylglutathione

hydrogensulfite

hydrogencarbonate

sulfate

sulfite

thiosulfate

selenate

nitrite

molybdate

selenide

superoxide

nitrate

perchlorate

selenite

OH^-

chloride

bromide

phosphate

diphosphate

triphosphate

Fe³⁺

Hg²⁺

Mo²⁺

Cu²⁺

Fe²⁺

Mg²⁺

Co²⁺

H⁺

ammonium

trimethyl sulfonium

2-iminobutanoate

2-iminosuccinate

nicotinate

riboflavin

L-ascorbate

thiamine

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

FMN

FAD

FMNH₂

FADH₂

NADH

NADPH

NAD⁺

NADP⁺

(R)-NADHX

(S)-NADHX

coenzyme A

oxidized coenzyme F₄₂₀-0

hydrogen cyanide

preQ₀

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

monodehydroascorbate radical

hydroxyl radical

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

Hg⁰

oxygen

hydrogen sulfide

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

(Z,Z)-biliverdin-IX α

hemin

siroheme

protoheme

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobalamin

adenosylcobalamin 5'-phosphate

cob(I)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

cob(I)alamin

cob(II)yrinate a,c-diamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

cob(II)yrinate c-monoamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

hypoglycin B

isoguanine

8-oxo-dGTP

8-oxo-GTP

AMP

ADP

ATP

adenylo-succinate

GDP

IMP

GTP

XMP

2'-deoxyinosine

2'-deoxyadenosine

cyclic-AMP

IDP

ITP

5'-deoxyadenosine

hypoxanthine

GMP

2'-deoxyguanosine

dGTP

dGDP

dATP

dADP

dITP

dIDP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

cyclic-GMP

dGMP

dAMP

dTDP

dUDP

dCDP

dUTP

dCTP

dTTP

dTMP

dUMP

dCMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

UMP

CMP

CDP

UDP

UTP

CTP

5-hydroxy-CTP

2-hydroxy-dATP

inosine

adenosine

xanthosine

guanosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

adenine

guanine

uracil

thymine

cytosine

N¹-ethyladenine

N¹-methyladenine

N3-methylcytosine

preQ₁

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

precorrin-2

precorrin-1

sirohydrochlorin

salinosporamide A

9H carbazole