ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C12054

L-dehydro-ascorbate

C1024

aminoacetone

C13983

α-D-galacturonate 1-phosphate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C1186

5-oxo-L-proline

C4690

selenodiglutathione

C4688

glutathioselenol

C12324

autoinducer 2

C4674

glutathione disulfide

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C13909

CDP-glycerol

C13912

3,5-dihydro-4H-imidazol-4-one

C13967

4-aminoimidazole

C1323

5-aminoimidazole-4-carboxylate

C6618

5-ureidoimidazole-4-carboxylate

C15181

(S)-5-amino-3-oxohexanoate

C623

(3S,5S)-3,5-diaminohexanoate

C352

2-iminoacetate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C11826

oxalosuccinate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C12409

creatinine

C1457

(2R,4S)-2, 4-diaminopentanoate

C12756

(2R)-2-amino-4-oxopentanoate

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C3376

(S)-4-hydroxy-2-oxohexanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C335

7-epicholate

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C15156

dialurate

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C12442

5-androstene-3,17-dione

C12444

pregn-5-ene-3,20-dione-17-ol

C12443

pregn-5-ene-3,20-dione

C15215

(L-threonylcarbamoyl)adenylate

C1325

4-amino-4-deoxychorismate

C1305

4-fumaryl-acetoacetate

C11869

N2-succinylglutamate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C9422

nicotinate adenine dinucleotide

C12192

carbonic acid

C12230

formamide

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C11874

N-succinyl-2-amino-6-ketopimelate

C12016

(lipoyl)adenylate

C1553

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

C3656

D-gluconate 6-phosphate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C1038

α-ribazole

C912

chloroacetaldehyde

C11772

O-phosphoethanolamine

C11773

phosphocholine

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C13627

DNA without lesion

C12492

1,6-anhydro-N-acetyl-β-muramate

C1440

nigerose

C12352

(S)-dihydroorotate

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C12102

isobutanol

C13800

3-methylbutanol

C13801

3-methylbutanal

C13799

2-methylbutanol

C11976

2-methylbutanal

C13798

2-phenylethanol

C11635

L-tartrate

C11986

meso-tartrate

C13870

2-hydroxy-3-oxosuccinate

C1353

3-phosphooxypyruvate

C11723

L-quinate

C933

L-canavanine

C12044

L-histidinol phosphate

C15327

2,5-diaminohexanoate

C12146

hydroxylamine

C13650

deethylsimazine

C13649

N-ethylammeline

C14111

4-pyridoxolactone

C4883

2-oleoylglycerol

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C11715

quinolinate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C13854

hydrogen selenide

C12214

(S)-4-amino-5-oxopentanoate

C12139

preuroporphyrinogen

C1231

5-aminolevulinate

C11767

porphobilinogen

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C12315

5,6-dimethylbenzimidazole

C1036

α-ribazole 5'-phosphate

C1198

5-dehydro-4-deoxy-D-glucarate

C1501

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

C6349

3-oxopropanoate

C1321

4-aminobutanoate

C11639

succinate semialdehyde

C12254

ethanolamine

C12178

histidinal

C12176

histidinol

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C11760

prephenate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11653

shikimate

C11652

shikimate 3-phosphate

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C1223

5-aminopentanoate

C14180

dihydrolipoate

C13681

5-carboxymethyl-2-hydroxymuconate

C8938

oxalate

C14145

3-deoxy-D-glycero-2,5-hexodiulosonate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C3850

5-amino-6-(D-ribitylamino)uracil

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C11946

N-(5-phosphoribosyl)-anthranilate

C1528

2-dehydropantoate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C13723

arsenite

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C7349

chloramphenicol

C571

4-hydroxy-2-nonenal

C1002

anthranilate

C11654

selenophosphate

C11539

xanthine

C14074

prenyl diphosphate

C11857

β-nicotinate D-ribonucleotide

C13635

β-D-ribosylnicotinate

C1196

S-methyl-5'-thioadenosine

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C12364

isopentenyl diphosphate

C11802

4'-phosphopantetheine

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C12029

S-ribosyl-L-homocysteine

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1010

ammonia

C11634

tartronate semialdehyde

C7865

urea

C13928

urea-1-carboxylate

C873

coproporphyrinogen III

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C11756

propionamide

C8366

(indol-3-yl)acetamide

C1098

acrylamide

C1096

acrylate

C1303

4-guanidinobutyramide

C13919

4-guanidinobutanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C891

citrate

C11988

mesaconate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C12394

6-phospho D-glucono-1,5-lactone

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C11794

3'-phosphoadenylyl-sulfate

C12164

H2

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C11479

phosphoenolpyruvate

C1108

acetyl phosphate

C12048

γ-L-glutamyl 5-phosphate

C13946

5-(methylsulfanyl)-α-D-ribose

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C927

carbon monoxide

C3344

2-dehydro-3-deoxy-D-gluconate

C12162

hydrogen peroxide

C1285

4-imidazolone-5-propanoate

C11557

urocanate

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C1112

ManNAc-GlcNAc-PP-undecaprenol

C12494

N-acetyl-D-muramate 6-phosphate

C15282

D-galactosamine-6-phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C3482

dihydroxyacetone

C10349

glycerone phosphate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C11832

orotidine 5'-phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C6361

acetoacetate

C12218

α-D-glucosamine 1-phosphate

C3262

3-methyl-2-oxobutanoate

C939

butanoyl phosphate

C1102

O-acetyl-L-serine

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C14218

L-β-lysine

C6444

oxaloacetate

C6597

3-ureidopropanoate

C928

CO2

C2191

carbamoyl phosphate

C11543

H2O

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C12274

enol-phenylpyruvate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C446

5-hydroxyindole thiazolidine carboxylate

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C14152

pyruvic oxime

C1271

4-oxoglutaramate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C14495

3-hydroxy-5- oxohexanoyl-CoA

C14754

3-hydroxy-5-oxohexanoate

C15072

dihydrophloroglucinol

C15155

phloroglucinol

C11743

pyrogallol

C1580

1,2,3,5-tetrahydroxybenzene

C14907

gallate

C13366

(indole-3-yl)acetonitrile

C13354

preQ0

C13422

hydrogen cyanide

C7151

6,8-dihydroxypurine

C6934

4-hydroxybenzoate

C7139

4-tyrosol

C3093

urate

C11421

protocatechuate

C8974

4-aminobenzoate

C8968

benzoate

C8490

3-methoxy-4-hydroxyphenylglycol

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C5543

ubiquinol-8

C1867

3-demethylubiquinol-8

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C6043

4-methylphenol

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3257

2-oxobutanoate

C3351

glyoxylate

C3308

pyruvate

C3301

2-oxoglutarate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C3536

L-α-amino-ε-keto-pimelate

C12303

L-citrulline

C5583

L-methionine

C5581

L-proline

C5575

L-tryptophan

C5605

L-histidine

C5571

L-valine

C5588

L-leucine

C5603

L-isoleucine

C5577

L-threonine

C5573

L-tyrosine

C5597

L-alanine

C12067

glycine

C5609

L-glutamine

C5579

L-serine

C5584

L-lysine

C2469

L-phenylalanine

C5642

L-arginine

C5607

L-glutamate

C5643

L-asparagine

C5596

L-aspartate

C5612

L-cysteine

C12233

L-glutamate-5-semialdehyde

C12237

L-canaline

C2426

S-sulfo-L-cysteine

C12239

L-aspartate 4-semialdehyde

C12229

O-phospho-L-homoserine

C12247

L-homocysteine

C12231

L-ornithine

C12245

L-homoserine

C12227

O-succinyl-L-homoserine

C12261

hypoglycin A

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C12223

D-ornithine

C5630

Nω-hydroxy-L-arginine

C5580

L,L-diaminopimelate

C12073

L-aspartyl-4-phosphate

C5595

L-cystathionine

C5601

L-isoglutamine

C5478

N-formyl-L-glutamate

C5476

formyl-L-isoglutamine

C5466

N-formimino-L-glutamate

C3621

N-acetyl-L-aspartate

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C13322

N-carbamoyl-L-aspartate

C11443

creatine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C8797

D-glutamate

C8805

D-aspartate

C8807

D-lysine

C8798

D-cysteine

C8796

D-proline

C8799

D-alanine

C12021

D-nopaline

C12201

L-2-amino-3-oxobutanoate

C4740

S-methyl-L-methionine

C3628

sarcosine

C6532

(2S, 3S)-3-methylaspartate

C5553

N-formimino-glycine

C13320

N-carbamoylglycine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C11955

O-acetyl-L-homoserine

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C8950

chorismate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C8928

D-galactarate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8536

3-carboxy-cis,cis-muconate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C951

4-hydroxybutanoate

C6186

(S)-lactate

C6185

(R)-lactate

C8186

(R)-2-hydroxyglutarate

C11476

(R)-glycerate

C3420

propanoate

C11517

acetate

C3421

formate

C3418

butanoate

C3415

laurate

C3412

decanoate

C6371

3-oxoadipate

C6165

leukotriene-E4

C6163

leukotriene-D4

C6375

di-homo-γ-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C3383

palmitate

C3387

stearate

C3391

myristate

C3381

arachidate

C11482

(R)-pantoate

C11487

D-mannonate

C11485

D-gluconate

C11481

orotate

C4985

(S)-1-pyrroline-5-carboxylate

C2137

D-tagaturonate

C2021

aldehydo-D-galacturonate

C2047

aldehydo-D-glucuronate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C2858

glycolaldehyde

C9494

D-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2141

aldehydo-D-mannose

C2140

β-D-mannopyranose

C2063

β-D-ribopyranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C5533

L-glyceraldehyde

C3485

butan-1-al

C3523

1-propanal

C3494

isobutanal

C3483

formaldehyde

C3500

acetaldehyde

C6246

(S)-lactaldehyde

C14804

phytenal

C6090

methylglyoxal

C2040

diacetyl

C10143

menadione

C3449

butan-1-ol

C3447

propan-1-ol

C3448

methanol

C3450

ethanol

C14807

phytol

C3731

glycerol

C6555

galactitol

C6561

D-mannitol

C10569

tributyrin

C10554

1,2-dibutyrin

C2765

1-oleoyl-2-lyso-glycerone phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C9077

(2E,6E)-farnesyl diphosphate

C4027

3-oxo-24-ethyl-26-al-cholest-4-ene

C4195

3-oxo-24-ethyl-cholest-4-en-26-oate

C4007

3,24-dioxo-cholest-4-en-26-oate

C4121

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

C4235

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

C4101

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

C4141

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

C4047

3-oxo-24-ethyl-cholest-4-ene

C4187

sitosterol

C3955

3-oxo-24-ethyl-cholest-5-ene

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4086

1-(β-D ribofuranosyl)nicotinamide

C4068

5-dehydro-4-deoxy-D-glucuronate

C2012

keto-D-fructose

C8835

β-D-fructofuranose

C2143

D-xylulose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10381

a peptidoglycan dimer (mycobacteria)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3124

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

C3135

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C6551

α-lactose 6'-phosphate

C7780

UDP-α-D-glucose

C1939

dTDP-α-D-glucose

C10263

ADP-α-D-glucose

C7764

UDP-α-D-galacturonate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7804

UDP-α-D-galactofuranose

C8666

UDP-α-D-galactose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7722

UDP-α-D-glucuronate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7790

UDP-N-acetyl-α-D-mannosamine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1009

GDP-α-D-mannose

C983

GDP-α-D-mannuronate

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C10326

β-D-fructose 1,6-bisphosphate

C10323

D-tagatofuranose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2116

β-D-galactose 6-phosphate

C2115

α-D-galactose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8819

L-fuculose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C3675

D-altronate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7753

XTP

C7749

dITP

C7834

dIMP

C7759

ITP

C7823

dADP

C7807

dGDP

C7743

dAMP

C7840

dGMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10267

pppGpp

C10266

ppGpp

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7811

XMP

C7827

GMP

C5552

5'-deoxyadenosine

C7751

dGTP

C7783

dATP

C7785

hypoxanthine

C7809

AMP

C7844

ATP

C7757

ADP

C7745

GTP

C7741

IMP

C10288

adenylo-succinate

C7795

GDP

C13346

CDP-choline

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C7306

5'-deoxy-5'-fluoroadenosine

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2519

thymidine

C2527

2'-deoxyuridine

C15085

guanosine

C15091

inosine

C15094

xanthosine

C15088

adenosine

C8755

dCMP

C8770

dUMP

C8744

dTMP

C2241

UMP

C2245

CMP

C8764

dTTP

C8724

dUTP

C8772

dCTP

C8752

dUDP

C8720

dTDP

C8733

dCDP

C8732

CDP

C8714

UDP

C8760

UTP

C8761

CTP

C4243

β-nicotinamide D-ribonucleotide

C1817

cyclic di-3',5'-guanylate

C9540

preQ1

C10601

thymine

C8739

uracil

C2226

purine

C9455

guanine

C9454

adenine

C11520

hypoglycin B

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C8543

cyanophycin primer-L-aspartate

C8539

cyanophycin primer

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9845

cobalt-sirohydrochlorin

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9865

Mg-protoporphyrin

C9800

adenosylcobyrate

C1218

adenosylcobalamin 5'-phosphate

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C6624

protoheme

C2255

N2

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7662

uroporphyrinogen-I

C7632

siroheme

C7118

hydrogen sulfide

C7121

oxygen

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C6427

2,3-diphospho-D-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6757

(S)-citramalate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C8962

nitric oxide

C8958

superoxide

C8959

monodehydroascorbate radical

C13088

chloramphenicol 3-acetate

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C4734

dimethyl sulfide

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4606

S-(hydroxymethyl)glutathione

C3978

thiocyanate

C3998

methanethiol

C4678

glutathione

C4644

S-sulfanylglutathione

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C4328

ammonium

C4320

H+

C11006

Co2+

C11023

Fe2+

C11009

Mg2+

C11019

Ca2+

C11007

Ni2+

C1689

trimethyl sulfonium

C7017

selenite

C7022

selenide

C7024

thiosulfate

C7020

selenate

C7016

sulfite

C7036

hydrogencarbonate

C7028

nitrite

C7030

nitrate

C7034

hydrogensulfite

C7014

sulfate

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C10301

agmatine

C3548

putrescine

C3574

spermidine

C2179

choline

C11516

glycine betaine

C11222

sn-glycero-3-phosphoethanolamine

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C7869

acetamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C10996

nicotinamide

C4498

cholest-4-en-3-one

C4832

(25S)-26-hydroxycholest-4-en-3-one

C4512

(25S)-26-oxocholest-4-en-3-one

C4520

(25S)-3-oxocholest-4-en-26-oate

C4571

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

C4519

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4541

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

C4506

3-oxochol-4,22-dien-24-oyl-CoA

C4818

3-oxochol-4-en-24-oyl-CoA

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4834

3-oxocholest-4,24-dien-26-oyl-CoA

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C12537

pregnenolone

C12485

campest-4-en-3-one

C10546

progesterone

C11720

testosterone

C11726

campest-4-en-3β-ol

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10542

androst-4-ene-3,17-dione

C10555

5α-androstane-3,17-dione

C6332

cholate

C6358

glycocholate

C6306

3-dehydrocholate

C6352

isocholate

C4202

3-β-hydroxyandrost-5-en-17-one

C12556

androsterone

C11342

cholesterol

C11346

cholest-5-en-3-one

C11759

17-α-hydroxypregnenolone

C6218

(+)-7-epi-jasmonate

C9096

(indol-3-yl)acetate

C5313

2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C5188

dihomo γ-linolenoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C4933

formyl-CoA

C4907

oxalyl-CoA

C4937

3'-dephospho-CoA

C5304

(3S)-citryl-CoA

C4922

isobutanoyl-CoA

C4927

(E)-glutaconyl-CoA

C4901

succinyl-CoA

C5314

2-methylacetoacetyl-CoA

C5298

acetyl-CoA

C5302

4-hydroxybutanoyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C5892

palmitoyl-CoA

C5885

stearoyl-CoA

C5890

myristoyl-CoA

C5887

icosanoyl-CoA

C6562

hexadecanedioyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C10076

L-galactono-1,4-lactone

C2598

D-glucono-1,5-lactone

C10053

FAD

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C2951

hippurate

C10612

tetrahydrosarcinapterin

C10617

5-methyl-tetrahydrosarcinapterin

C10611

(R)-lipoate

C10614

coenzyme A

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10994

thiamine

C10982

nicotinate

C10988

riboflavin

C10986

L-ascorbate

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4200

pyridoxal

C2323

precorrin-7

C2297

precorrin-8x

C2302

precorrin-3A

C2300

precorrin-5

C2314

precorrin-3B

C2320

precorrin-4

C2317

precorrin-6B

C2308

precorrin-6A

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C2001

hydantoin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C10609

7,8-dihydropteroate