an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

dimethyl sulfoxide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

1,4-dihydroxy-2-naphthoate

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

N-Formyl-L-kynurenine

2-amino-3-carboxymuconate-6-semialdehyde

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

3'-phosphoadenylyl-sulfate

vanillin

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2,3-didehydroadipyl-CoA

glutathione disulfide

4-amino-2-methyl-5-pyrimidinemethanol

hydroxypyruvate

2-(α-hydroxyethyl)thiamine diphosphate

H₂

dialurate

(R)-1-amino-2-propanol O-2-phosphate

isobutanol

5-oxo-L-proline

mercuriphenyl acetate

methylamine

N-ethylglycine

ethylamine

nicotinate adenine dinucleotide

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2-oleoylglycerol

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

7-carboxy-7-deazaguanine

(S)-2,3,4,5-tetrahydrodipicolinate

4-amino-4-deoxychorismate

oxalosuccinate

5-aminolevulinate

propane-1,3-diamine

β-D-ribosylnicotinate

coproporphyrinogen III

urea-1-carboxylate

L-selenocystathionine

1-pyrroline

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

prephenate

2-iminoacetate

(S)-dihydroorotate

5-phospho-β-D-ribosylamine

4-acetamidobutanal

4-acetamidobutanoate

carbamoyl phosphate

O-ureido-L-homoserine

3-hydroxyanthranilate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

2-C-methyl-D-erythritol 4-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

muconolactone

(+)-muconolactone

cis,cis-muconate

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

isochorismate

5-enolpyruvoyl-shikimate 3-phosphate

lipid X

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

adenosine 3',5'-bisphosphate

3-deoxy-α-D-manno-2-octulosonate

lipid A disaccharide (E. coli)

lipid IV_A

nitrilotriacetate

iminodiacetate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(S)-4-amino-5-oxopentanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-pyridoxolactone

(L-threonylcarbamoyl)adenylate

dethiobiotin

pimeloyl-CoA

(S)-2-amino-6-oxohexanoate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

S-formylglutathione

L-histidinol phosphate

histidinal

histidinol

(R)-pantothenate

2-dehydropantoate

arsenite

citrate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

γ-L-glutamyl 5-phosphate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

acetyl phosphate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

glycerone phosphate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N-(5-phosphoribosyl)-anthranilate

anthranilate

porphobilinogen

preuroporphyrinogen

L-arginino-succinate

canavaninosuccinate

L-canavanine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

quinolinate

2-phosphoglycolate

glycolate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

phosphoenolpyruvate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

homogentisate

(2-hydroxyphenyl)acetate

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

acetoacetate

urocanate

4-imidazolone-5-propanoate

formamide

thiamine phosphate

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

β-nicotinate D-ribonucleotide

(S)-ureidoglycolate

urea

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

orotidine 5'-phosphate

dihydrolipoamide

S-acetyldihydrolipoamide

α-D-glucosamine 1-phosphate

hydrogen peroxide

DNA without lesion

4-aminobutanoate

succinate semialdehyde

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

palmitaldehyde

hydrogen selenide

O-acetyl-L-serine

shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

isopentenyl diphosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N²-succinylglutamate

shikimate

3-dehydroshikimate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

xanthine

oxaloacetate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

CO₂

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

H₂O

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

ammonia

4-oxoglutaramate

1-piperideine 6-carboxylate

4-methylphenol

L-homocysteine

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

DNA with lesion

phenylacetate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

adenosylcobyrate

adenosyl-cobinamide phosphate

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(I)alamin

adenosylcobalamin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

protoheme

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

siroheme

Hg⁰

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(2E,6E)-farnesyl diphosphate

superoxide

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

methanethiol

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

methanesulfinate

dimethyl sulfone

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

methanesulfonate

(R)-S-lactoylglutathione

K⁺

ammonium

H⁺

Hg²⁺

Mg²⁺

Fe²⁺

trimethyl sulfonium

selenite

selenide

selenate

nitrite

sulfite

thiosulfate

hydrogencarbonate

hydrogensulfite

sulfate

phosphate

triphosphate

diphosphate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

4-aminobutanal

putrescine

glycine betaine

choline

betaine aldehyde

betaine aldehyde hydrate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

allantoate

(S)-(+)-allantoin

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(+)-7-epi-jasmonate

(3S)-hydroxyadipyl-CoA

isobutanoyl-CoA

methylacrylyl-CoA

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

phenylacetyl-CoA

(2S)-methylsuccinyl-CoA

2-methylacetoacetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3'-dephospho-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

succinyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

acetyl-CoA

malonyl-CoA

crotonyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

D-glucono-1,5-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-8

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

3-demethylubiquinol-8

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

thiamine

nicotinate

riboflavin

4-pyridoxate

pyridoxamine

pyridoxine

pyridoxal

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

(S)-1-pyrroline-5-carboxylate

precorrin-2

precorrin-1

precorrin-3A

precorrin-3B

sirohydrochlorin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

xanthosine

guanosine

adenosine

inosine

hypoxanthine

dAMP

dGMP

dATP

dGTP

dITP

dADP

dGDP

dIDP

IDP

GDP

ADP

AMP

GMP

IMP

XMP

ITP

ATP

GTP

dCMP

uracil

dTDP

dTTP

dCDP

dCTP

dUDP

dUTP

CTP

CDP

dUMP

dTMP

UTP

orotate

UDP

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

uridine

cytidine

UMP

CMP

preQ₁

preQ₀

salicylaldehyde

benzene

urate

4-hydroxybenzoate

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

phenol

protocatechuate

2,3-dihydroxybenzoate

catechol

salicylate

vanillate

4-aminobenzoate

benzoate

chorismate

(4S)-4-hydroxy-2-oxoglutarate

L-aspartate

fumarate

succinate

(R)-malate

(S)-malate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

cis-aconitate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

formate

acetate

pyruvate

butanoate

octanoate

3-oxoadipate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

stearate

palmitate

(R)-pantoate

D-gluconate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

L-kynurenine

L-α-amino-ε-keto-pimelate

D-serine

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

L-leucine

L-alanine

L-glutamine

glycine

D-glutamate

L-glutamate

L-lysine

L-histidine

L-arginine

L-asparagine

L-threonine

L-tyrosine

L-cysteine

L-tryptophan

D-alanine

seleno-L-homocysteine

L-aspartyl-4-phosphate

3-phospho-L-serine

sarcosine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-citrulline

L-valine

L-isoleucine

hypoglycin A

L-canaline

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-ornithine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L,L-diaminopimelate

L-2,4-diaminobutanoate

L-cystathionine

L-isoglutamine

a coenzyme-A group

methylglyoxal

diacetyl

pyrroloquinoline quinone

glycolaldehyde

3-(N-morpholino)propanal

isobutanal

1-octanal

acetaldehyde

butan-1-al

formaldehyde

(S)-lactaldehyde

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

ethanol

methanol

1-octanol

glycerol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

3-octaprenyl-4-hydroxybenzoate

1-(β-D ribofuranosyl)nicotinamide

sucrose

α,α-trehalose

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B