an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

1-piperideine 6-carboxylate

4-oxoglutaramate

pyruvic oxime

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5-hydroxyindole thiazolidine carboxylate

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

urocanate

4-imidazolone-5-propanoate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

CO₂

coproporphyrinogen III

8-amino-7-oxononanoate

pimeloyl-CoA

3-keto-β-D-galactose

3-dehydroshikimate

3-dehydroquinate

ammonia

(R)-mevalonate

aminoacetone

hydroxylamine

glycerone phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

phosphoenolpyruvate

L-β-lysine

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

pseudouridine 5'-phosphate

hydrogen peroxide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-dehydropantoate

prenyl diphosphate

isopentenyl diphosphate

nicotinate adenine dinucleotide

(R)-mevalonate diphosphate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

6-phospho D-glucono-1,5-lactone

carbamoyl phosphate

glycolate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

(R)-5-phosphomevalonate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

4'-phosphopantetheine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

D-gluconate 6-phosphate

oxaloacetate

xanthine

S-acetyldihydrolipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

prephytoene diphosphate

ethanolamine

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

γ-L-glutamyl 5-phosphate

citrate

selenophosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

5-deoxy-α-ribose 1-phosphate

salicyl alcohol

creatinine

α-D-glucosamine 1-phosphate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

anthranilate

N-(5-phosphoribosyl)-anthranilate

carbon monoxide

oxalosuccinate

O-acetyl-L-serine

hydrogen selenide

prephenate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

4-methyl-3-oxoadipate

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

3-ureidopropanoate

1,4-dihydroxy-2-naphthoate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(S)-dihydroorotate

H₂

vanillin

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

methylsalicylate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

acetoacetate

4-fumaryl-acetoacetate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

(S)-2-amino-6-oxohexanoate

(2S)-lactyl-2-diphospho-5'-guanosine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

3-oxopropanoate

succinate semialdehyde

4-aminobutanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

diethylphosphate

dimethylthiophosphate

diethylthiophosphate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

4-amino-4-deoxychorismate

arsenite

acetyl phosphate

urea

hydroxypyruvate

adenosine 5'-phosphosulfate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

N-acetyl-D-muramate 6-phosphate

quinolinate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-iminoacetate

formamide

pseudouridine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

orotidine 5'-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

L-homocysteine

4-methylphenol

hypoglycin B

L-methionine

L-alanine

L-valine

L-phenylalanine

L-isoleucine

L-selenocysteine

glycine

L-proline

L-leucine

L-tryptophan

L-cysteine

L-isoglutamine

L-glutamate

L-lysine

L-aspartate

L-threonine

L-glutamine

L-asparagine

L-histidine

L-serine

L-ornithine

L-arginine

L-aspartyl-4-phosphate

L-tyrosine

L-norvaline

L-cystathionine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

L-citrulline

L-4-hydroxyglutamate semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

hypoglycin A

S-sulfo-L-cysteine

meso-diaminopimelate

L-2-amino-3-oxobutanoate

L-saccharopine

3-phospho-L-serine

O-acetyl-L-homoserine

N-carbamoylglycine

N-acetyl-L-glutamate

sarcosine

S-methyl-L-methionine

D-alanine

D-glutamate

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

AMP

ATP

XMP

IMP

GMP

5'-deoxyadenosine

ADP

GDP

adenylo-succinate

GTP

ppGpp

pppGpp

2'-deoxyinosine

2'-deoxyadenosine

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

dADP

dGDP

dATP

dGTP

ITP

IDP

dITP

dIDP

2'-deoxyguanosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

cyclic-AMP

dGMP

dAMP

cyclic-GMP

5,6-dihydrouracil

5,6-dihydrothymine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-mannuronate

GDP-β-L-fucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-N-acetyl-β-neuraminate

guanine

adenine

thymine

uracil

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

dUMP

dTMP

dCMP

dCDP

dUDP

dTDP

dTTP

dUTP

dCTP

CDP

UDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

arbutin-6-phosphate

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

N,N'-diacetylchitobiose 6'-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

β-D-fructofuranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

L-glyceraldehyde

D-xylulose

D-ribulose

L-ribulose

keto-D-fructose

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

galactitol

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

melibiose

sucrose

α-maltose

α-lactose

maltohexaose

maltotetraose

maltopentaose

maltoheptaose

stachyose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

phlorisovalerophenone

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

all-trans-retinol

all-trans-retinyl palmitate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

apo-4'-lycopenoate

vanillylamine

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

fluoroacetaldehyde

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

1-propanal

isobutanal

1-octanal

formaldehyde

butan-1-al

menadione

diacetyl

a coenzyme-A group

2-oxobutanoate

2-oxoglutarate

pyruvate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

(R)-pantoate

acetate

orotate

fluoroacetate

(S)-1-pyrroline-5-carboxylate

aldehydo-D-glucuronate

pristanate

octanoate

decanoate

palmitate

butanoate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

γ-linolenate

(15Z)-tetracosenoate

phytenate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

cis-aconitate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

succinate

fumarate

(S)-malate

4-tyrosol

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

coumarinate

4-nitrophenol

4-aminophenol

menadiol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

parathion

amino-parathion

3-methoxy-4-hydroxyphenylglycol

hydrogen cyanide

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

cyclic pyranopterin phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FAD

FMN

riboflavin

FMNH₂

reduced riboflavin

hydantoin

adenosylcobalamin

cob(I)alamin

thiamine

L-ascorbate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

coenzyme A

oxidized coenzyme F₄₂₀-0

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

(R)-NADHX

(S)-NADHX

L-galactono-1,4-lactone

(S)-3-hydroxy-3-methylglutaryl-CoA

acetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

succinyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

isobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

(S)-3-aminobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

sulfite

thiosulfate

superoxide

selenide

hydrogensulfite

OH^-

trithionate

sulfate

hydrogencarbonate

molybdate

phosphate

diphosphate

triphosphate

Fe³⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

trimethyl sulfonium

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

methanethiol

thiocyanate

paraoxon

monodehydroascorbate radical

nitric oxide

5,10-methenyltetrahydrofolate mono-L-glutamate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

oxygen

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrinogen IX

Mg-protoporphyrin

protoporphyrin IX

uroporphyrinogen-III

magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

N₂

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester