an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-amino-2-methyl-5-pyrimidinemethanol

histidinal

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

N⁵-carboxyaminoimidazole ribonucleotide

1-deoxy-L-glycero-tetrulose 4-phosphate

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

(4-hydroxyphenyl)acetate

pyruvic oxime

2-carboxy-L-xylonolactone

cyclic-2,3-O-oxalyl-L-threonate

ammonia

5-hydroxyindole thiazolidine carboxylate

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2-carboxy-L-threo-pentonate

H₂O

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

glycerone phosphate

CO₂

coproporphyrinogen III

xanthine

(R)-pantothenate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

D-gluconate 6-phosphate

3-phosphooxypyruvate

arsenite

L-selenocystathionine

acetyl phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

α-D-galactosyl-diphosphoundecaprenol

isopentenyl diphosphate

indole-3-glycol aldehyde

indole-3-glycol

2-methylbutanal

2-methylbutanol

isobutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methylbutanal

3-methylbutanol

2-phenylethanol

selenophosphate

carbon monoxide

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

γ-L-glutamyl 5-phosphate

oxalosuccinate

citrate

oxaloacetate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

prenyl diphosphate

3-deoxy-α-D-manno-2-octulosonate

carbamoyl phosphate

hydrogen peroxide

prephenate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

phosphoenolpyruvate

3-dehydroshikimate

3-keto-L-gulonate 6-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

D-glucurono-6,3-lactone

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4'-phosphopantetheine

(S)-dihydroorotate

orotidine 5'-phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-oleoylglycerol

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

O-acetyl-L-serine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

hydrogen selenide

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

4-hydroxy-2-nonenal

pseudouridine 5'-phosphate

ethanolamine

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

1,4-dihydroxy-2-naphthoate

O-ureido-L-homoserine

butanoyl phosphate

pyrazine-2-carboxylate

2-iminoacetate

DNA without lesion

hydroxylamine

succinate semialdehyde

4-aminobutanoate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

glycolate

2-phosphoglycolate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

dihydroxyacetone

histidinol

L-histidinol phosphate

(L-threonylcarbamoyl)adenylate

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

morphinone

4-amino-4-deoxychorismate

α-D-glucosamine 1-phosphate

quinolinate

2-amino-3-carboxymuconate-6-semialdehyde

1,6-anhydro-N-acetyl-β-muramate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

thiamine diphosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

H₂

glutathione disulfide

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

2-dehydropantoate

3-methyl-2-oxobutanoate

pseudouridine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

(S)-3-methyl-2-oxopentanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

S-methyl-5'-thioadenosine

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

dehydroascorbate (bicyclic form)

L-dehydro-ascorbate

2,3-dioxo-L-gulonate

3-keto-L-gulonate

coenzyme A

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

preQ₀

(R)-2-hydroxyglutarate

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

superoxide

monodehydroascorbate radical

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

1-oleoyl-2-lyso-glycerone phosphate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

protoheme

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosylcobalamin

cob(I)alamin

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

glycine

L-serine

L-proline

L-glutamine

L-alanine

L-leucine

L-lysine

L-arginine

L-histidine

L-glutamate

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

L-citrulline

L-isoleucine

L-valine

L-threonine

L-aspartate

L-tyrosine

L-phenylalanine

L-methionine

L-asparagine

L-cysteine

O-succinyl-L-homoserine

S-adenosyl-L-methionine

L-homocysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

L-ornithine

S-sulfo-L-cysteine

L-canaline

L-homoserine

meso-diaminopimelate

L-selenocysteine

L-cystathionine

L-aspartyl-4-phosphate

L,L-diaminopimelate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

seleno-L-homocysteine

3-phospho-L-serine

N-α-acetyl lysine methyl ester

N-formimino-glycine

sarcosine

N-acetyl-L-glutamate

N-acetyl-L-methionine

D-alanine

D-aspartate

D-methionine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

ATP

ADP

hypoxanthine

GDP

dGDP

dADP

GMP

XMP

GTP

cyclic-AMP

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyadenosine

2'-deoxyguanosine

pppGpp

ppGpp

AMP

dATP

dGTP

IMP

guanosine

xanthosine

inosine

adenosine

thymidine

2'-deoxyuridine

2'-deoxycytidine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

NADH

NADPH

NAD⁺

NADP⁺

preQ₁

guanine

adenine

purine

thymine

uracil

dUDP

dCDP

dTDP

dUTP

dCTP

dTTP

dTMP

dUMP

dCMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CMP

UMP

UDP

CDP

CTP

UTP

UDP-α-D-glucose

dTDP-α-D-glucose

GDP-α-D-glucose

ADP-α-D-glucose

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-α-D-galactose

UDP-β-L-iduronate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

GDP-α-D-mannose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP-3-deoxy-β-D-manno-octulosonate

7,8-dihydrolumazine

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

FADH₂

FMNH₂

riboflavin

FAD

FMN

orotate

(S)-1-pyrroline-5-carboxylate

(indol-3-yl)acetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

2,3-dihydroxybenzoate

propan-1-ol

phytol

ethanol

butan-1-ol

methanol

(3S)-linalool

(3R)-linalool

glycerol

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

salicylaldehyde

4-tyrosol

urate

6,8-dihydroxypurine

8-hydroxypurine

menaquinol-13

menaquinol-12

menaquinol-7

menaquinol-6

menaquinol-10

menaquinol-8

menaquinol-9

menaquinol-11

demethylmenaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-9

demethylmenaquinol-11

4-methylphenol

salicylate

benzoate

4-aminobenzoate

(indol-3-yl)acetaldehyde

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

3-octaprenyl-4-hydroxybenzoate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

neoabietadiene

(+)-copalyl diphosphate

geranyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

morphine

L-galactono-1,4-lactone

D-glucono-1,5-lactone

acetyl-CoA

isobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

4-hydroxybutanoyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

propanoyl-CoA

butanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

crotonyl-CoA

Fe³⁺

Cd²⁺

Zn²⁺

Cu²⁺

Fe²⁺

Mn²⁺

Ni²⁺

Co²⁺

ammonium

H⁺

Na⁺

trimethyl sulfonium

thiosulfate

selenide

sulfate

hydrogencarbonate

molybdate

tungstate

chloride

phosphate

diphosphate

triphosphate

aldehydo-L-galactonate

L-gulonate

D-gluconate

maltotriose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

sucrose

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

D-glyceraldehyde

D-xylulose

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-neuraminate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

L-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

L-fuculose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

sucrose 6^F-phosphate

aldehydo-D-galacturonate

cadaverine

putrescine

spermidine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

nicotinamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

pyrazinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

methylglyoxal

(2E,6E)-farnesal

fluoroacetaldehyde

(S)-lactaldehyde

acetaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

butan-1-al

phytenal

glyoxylate

pyruvate

2-oxobutanoate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

3-oxoadipate

octanoate

(2E,6E)-farnesoate

acetate

formate

butanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

chorismate

fumarate

succinate

(S)-malate

D-glucarate

cis-aconitate

D-threo-isocitrate

phytenate

(R)-pantoate

fluoroacetate

aldehydo-D-glucuronate

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

hippurate

L-ascorbate

nicotinate

thiamine

pyridoxal 5'-phosphate

(R)-NADHX

(S)-NADHX