an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

5-aminopentanoate

(S)-ureidoglycolate

N⁶-(D-psicosyl)-L-lysine

2-amino-3-carboxymuconate-6-semialdehyde

(S)-2-amino-6-oxohexanoate

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

octopamine

methylamine

(R)-synephrine

N⁵-carboxyaminoimidazole ribonucleotide

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-maleylacetate

glutathioselenol

selenodiglutathione

hydrogenobyrinate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

H₂

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

mercuriphenyl acetate

pseudouridine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

L-xylo-hex-3-ulono-1,4-lactone

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

1,5-anhydro-D-fructose

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

2-oxoglutaramate

1-piperideine 6-carboxylate

4-oxoglutaramate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

ammonia

5-hydroxyindole thiazolidine carboxylate

xanthurenate

kynurenate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

glycolate

2-phosphoglycolate

acetyl phosphate

oxaloacetate

urea

L-canavanine

xanthine

CO₂

carbon monoxide

hydrogenobyrinate a,c-diamide

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

glycerone phosphate

formamide

4-imidazolone-5-propanoate

urocanate

hydrogen peroxide

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

2-amino-2-deoxy-D-gluconate 6-phosphate

dihydroxyacetone

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

salicyl alcohol

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

phosphoenolpyruvate

carbamoyl phosphate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

poly (glycerol phosphate)

CDP-glycerol

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine

histidinol

histidinal

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

2-keto-D-gluconate

carbonic acid

methylsalicylate

α-D-galactosyl-diphosphoundecaprenol

dihydromethanophenazine

CoB-CoM heterodisulfide

methanophenazine

coenzyme B

D-gluconate 6-phosphate

oxalate

L-gulono-1,4-lactone

2-dehydropantoate

acetoacetate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

5-hydroxytryptophol

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

succinate semialdehyde

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

autoinducer 2

S-ribosyl-L-homocysteine

ethanolamine

pseudouridine 5'-phosphate

O-acetyl-L-serine

hydrogen selenide

phosphocholine

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

L-histidinol phosphate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

citrate

oxalosuccinate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(R)-2,3-dihydroxy-3-methylpentanoate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

quinolinate

cotinine

3-dehydroshikimate

shikimate

nicotinate adenine dinucleotide

coproporphyrinogen III

N-acetylmuramoyl-L-ala-D-glu

N-acetylmuramoyl-L-ala-D-glu-(L)-meso-diaminopimelate -(L)-D-ala

(lipoyl)adenylate

isopentenyl diphosphate

3-phosphonopyruvate

butanoyl phosphate

2-dehydro-6-phospho-D-gluconate

6-phospho D-glucono-1,5-lactone

(R)-4'-phosphopantothenate

(R)-pantothenate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

glutathione disulfide

3-phosphooxypyruvate

prenyl diphosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-dehydroquinate

anthranilate

N-(5-phosphoribosyl)-anthranilate

shikimate 3-phosphate

o-(α-D-glucosyl)-polyglycerol phosphate

L-β-lysine

γ-L-glutamyl 5-phosphate

pimeloyl-CoA

pimelate

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

dethiobiotin

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-deoxyerythronolide B

aminoacetone

2-C-methyl-D-erythritol 4-phosphate

thiamine diphosphate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

orotidine 5'-phosphate

(S)-dihydroorotate

S-acetyldihydrolipoamide

dihydrolipoamide

2-(α-hydroxyethyl)thiamine diphosphate

N-acetyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

5-(methylsulfanyl)-ribulose 1-phosphate

dimethylamine

(R)-mandelate

(S)-mandelate

4-methylmuconolactone

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

5-dehydro-4-deoxy-D-glucarate

L-selenocystathionine

4-amino-2-methyl-5-pyrimidinemethanol

4-hydroxy-2-nonenal

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

prephytoene diphosphate

5-carboxymethyl-2-hydroxymuconate

2,3,5,6-tetracholorophenol

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-androstene-3,17-dione

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(S)-scoulerine

(S)-reticuline

(1R,2R)-1,2-diphenylethane-1,2-diol

cis-stilbene oxide

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

L-thyroxine phenolic β-D-glucuronide

L-thyroxine acyl β-D-glucuronide

5-hydroxytryptophol glucuronide

N-acetyl-serotonin glucuronide

cotinine-glucuronide

nicotine-glucuronide

L-tartrate

2-hydroxy-3-oxosuccinate

meso-tartrate

4-aminobutanoate

3-oxopropanoate

S-formylglutathione

(4-hydroxyphenyl)acetate

2,5-didehydro-D-gluconate

α-D-glucosamine 1-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-amino-4-deoxychorismate

deaminohydroxyblasticidin S

1,4-dihydroxy-2-naphthoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

iminodiacetate

nitrilotriacetate

DNA without lesion

4-(2-aminophenyl)-2,4-dioxobutanoate

2-oxoadipate

4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate

arsenite

(L-aspartyl)adenylate

(2,3-dihydroxybenzoyl)adenylate

vanillin

N^β-acetylstreptothricin F

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

hop-22(29)-ene

squalene

N,N-dimethyl-1,4-phenylenediamine

(S)-2,3-dihydrodipicolinate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

2-iminoacetate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

hexulose 6-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

4-guanidinobutyramide

hypoglycin B

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

L-methionine

L-cysteine

glycine

L-isoleucine

L-leucine

L-valine

L-phenylalanine

L-alanine

L-proline

L-selenocysteine

L-tryptophan

L-isoglutamine

L-aspartate

L-ornithine

L-glutamate

L-arginine

L-histidine

L-tyrosine

L-glutamine

L-serine

L-lysine

L-threonine

L,L-diaminopimelate

L-asparagine

L-aspartyl-4-phosphate

L-cystathionine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-formyl-L-methionine

N⁶,N⁶-dimethyl-L-arginine

L-citrulline

1-aminocyclopropane-1-carboxylate

L-4-hydroxyglutamate semialdehyde

L-glutamate-5-semialdehyde

L-canaline

L-homocysteine

hypoglycin A

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

O-succinyl-L-homoserine

L-cystine

N⁶-(D-fructosyl)-L-lysine

D-ornithine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

2-hydroxy-5-oxoproline

L-selenomethionine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

L-2-amino-3-oxobutanoate

3-hydroxy-L-kynurenine

N-acetyl-L-glutamate

sarcosine

S-methyl-L-methionine

3-phospho-L-serine

D-lysine

D-proline

D-aspartate

D-alanine

D-glutamate

D-serine

β-alanine

(S)-3-amino-2-methylpropanoate

3,5,3'-triiodo-L-thyronine

8-oxo-GMP

8-oxo-GTP

isoguanine

ADP

ATP

GDP

adenylo-succinate

IMP

GTP

hypoxanthine

AMP

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

XMP

GMP

5'-deoxyadenosine

dADP

dATP

dGDP

dGTP

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

ITP

IDP

dITP

dIDP

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

dGMP

dAMP

8-oxo-dGMP

8-oxo-dGTP

CDP-choline

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-4-dehydro-6-deoxy-α-D-glucose

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-β-L-mycarose

dTDP-D-desosamine

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-N-acetyl-β-neuraminate

guanine

adenine

thymine

uracil

preQ₁

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dTMP

dUMP

dCMP

dTDP

dCDP

dUDP

dTTP

dCTP

dUTP

UDP

CDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CTP

2-hydroxy-dATP

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

NAD⁺

NADP⁺

NADH

NADPH

uridine 3'-monophosphate

cytidine-3'-monophosphate

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5'-deoxy-5'-fluoroadenosine

aldehydo-L-galactonate

D-gluconate

L-gulonate

D-mannonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

arbutin-6-phosphate

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

N⁶-(6-phospho-D-fructosyl)-L-lysine

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-tagatofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α-lactose 6'-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

1,5-anhydro-D-mannitol

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

D-ribulose

D-xylulose

L-ribulose

keto-D-fructose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

D-sorbitol

L-iditol

6-kestotriose

6,6-kestotetraose

β-D-cellobiose

maltotriose

6_G-kestotriose

1,6-kestotetraose

1,1-kestotetraose

1-kestotriose

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-glucosyluronate-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

sucrose

melibiose

α-maltose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

stachyose

raffinose

aldehydo-D-galacturonate

salicylaldehyde

trans-3'-hydroxycotinine

trans-3-hydroxycotinine-glucuronide

4-methylumbelliferone

coumarin

scopoletin

all-trans-retinol

all-trans-retinyl palmitate

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-5-ene

sitosterol

oleanolate 3 β-D-glucuronoside

oleanolate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

15-cis-phytoene

cephalosporin C

deacetylcephalosporin C

erythromycin D

3-α-mycarosylerythronolide B

blasticidin S

streptothricin F

ferric-enterobactin complex

iron(III) dicitrate

erythronolide B

(S)-nicotine

betanidin quinone

betanidin

vanillylamine

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

1-18:1-2-18:1-phosphatidylethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1,2-dibutyrin

tributyrin

scyllo-inositol

1D-chiro-inositol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

hydroquinone

protocatechuate

dopamine

4,6-dichloro-3-methylcatechol

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

(R,R)-2,3-butanediol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

fluoroacetaldehyde

(2E,6E)-farnesal

3-(N-morpholino)propanal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

phytenal

1-octanal

acetaldehyde

formaldehyde

1-propanal

isobutanal

butan-1-al

(R)-acetoin

α-tocopherol

γ-tocopherol

β-tocopherol

δ-tocopherol

α-tocotrienol

γ-tocotrienol

β-tocotrienol

δ-tocotrienol

diacetyl

acetone

2',4,4',6'-tetrahydroxychalcone

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

4-(methylsulfanyl)-2-oxobutanoate

pyruvate

2-oxoglutarate

2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

fluoroacetate

5-deoxy-D-glucuronate

acetate

(R)-pantoate

allantoate

orotate

mycophenolate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

aldehydo-D-glucuronate

pristanate

octanoate

palmitate

decanoate

butanoate

oleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

propanoate

formate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

cis-aconitate

D-threo-isocitrate

chorismate

3-methyl-cis,cis-muconate

(3E)-2-oxohex-3-enedioate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

(R)-malate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

benzene

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

4-hydroxybenzoate

4-vinylguaiacol

coumarinate

ferulate

6,7-dehydrobaicalein

baicalein

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

pentachlorophenol

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

tetraiodothyroacetate ether glucuronide

tetraiodothyroacetate

tetraiodothyroacetate ester glucuronide

triiodothyroacetate ester glucuronide

3,3',5-triiodothyroacetate

triiodothyroacetate ether glucuronide

L-thyroxine

3-amino-4-hydroxybenzoate

3-amino-4-hydroxybenzaldehyde

aniline

tyramine

N-acetyl-serotonin

3-acetylamino-4-hydroxybenzoate

3-acetylamino-4-hydroxybenzaldehyde

4-nitrophenol

phenol

4-methylphenol

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

2,3,5,6-tetrachlorohydroquinone

3-demethylubiquinol-8

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-7

menaquinol-8

ubiquinol-8

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

preQ₀

hydrogen cyanide

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydropteroate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FMN

riboflavin

FAD

FMNH₂

FADH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

dipicolinate

sirohydrochlorin

precorrin-3A

precorrin-3B

precorrin-4

precorrin-5

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

precorrin-2

precorrin-1

adenosylcobalamin

cob(I)alamin

L-ascorbate

nicotinate

nicotinamide

thiamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

coenzyme A

coenzyme M

(R)-lipoate

(R)-NADHX

(S)-NADHX

glycine betaine

mycophenolic acid O-acyl-glucuronide

mycophenolic acid phenolic glucuronide

D-glucono-1,5-lactone

L-galactono-1,4-lactone

3-chloro-2-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

2-chloro-5-methyl-dienelactone

cis-dienelactone

4-hydroxybutanoyl-CoA

(S)-3-aminobutanoyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

acetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

2-methylacetoacetyl-CoA

7-methyl-3-oxooct-6-enoyl-CoA

3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA

malonyl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

isobutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

pregnenolone

ethene

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

17-α-hydroxypregnenolone

cholest-5-en-3-one

cholesterol

3-β-hydroxyandrost-5-en-17-one

isocholate

3-dehydrocholate

cholate

glycocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

2-chloromaleylacetate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

3,5-dichloro-2-methyl-muconate

3-chloro-cis,cis-muconate

(S)-2-chloropropanoate

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

betaine aldehyde hydrate

betaine aldehyde

choline

agmatine

spermidine

putrescine

spermine

cadaverine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

selenite

OH^-

hydrogensulfite

sulfate

nitrate

nitrite

hydrogencarbonate

sulfite

thiosulfate

superoxide

selenate

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Co²⁺

Cu²⁺

Hg²⁺

Fe²⁺

Cd²⁺

ammonium

H⁺

Na⁺

trimethyl sulfonium

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

methanethiol

thiocyanate

S-sulfanylglutathione

4-nitrophenyl phosphate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

hydroxyl radical

monodehydroascorbate radical

nitric oxide

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

4-dimethylaminophenylazobenzene

α-glucose 1,6-bisphosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

Hg⁰

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

nitrous oxide

cob(II)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

hippurate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-cysteinylglycine

meso-diaminopimeloyl-alanine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

2-iminosuccinate

2-iminobutanoate