ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C11543

H2O

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C928

CO2

C873

coproporphyrinogen III

C6444

oxaloacetate

C11539

xanthine

C9422

nicotinate adenine dinucleotide

C11857

β-nicotinate D-ribonucleotide

C11748

pseudouridine 5'-phosphate

C12364

isopentenyl diphosphate

C13723

arsenite

C1522

3-demethylubiquinol-6

C1196

S-methyl-5'-thioadenosine

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C2586

(E)-4-coumaroyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C6361

acetoacetate

C1268

(R)-4'-phosphopantothenate

C11800

(R)-pantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1528

2-dehydropantoate

C3262

3-methyl-2-oxobutanoate

C12171

homogentisate

C473

(2-hydroxyphenyl)acetate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10261

ADP-L-glycero-β-D-manno-heptose

C10260

ADP-D-glycero-β-D-manno-heptose

C12369

3-dehydroquinate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C11479

phosphoenolpyruvate

C11653

shikimate

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C12096

isochorismate

C11639

succinate semialdehyde

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C12139

preuroporphyrinogen

C11767

porphobilinogen

C7865

urea

C1102

O-acetyl-L-serine

C13854

hydrogen selenide

C14218

L-β-lysine

C15056

salicyl alcohol

C2580

methylsalicylate

C571

4-hydroxy-2-nonenal

C11836

hydroxypyruvate

C1283

4-maleyl-acetoacetate

C891

citrate

C12162

hydrogen peroxide

C10349

glycerone phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C1184

5-phospho-β-D-ribosylamine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C11832

orotidine 5'-phosphate

C12176

histidinol

C12044

L-histidinol phosphate

C1353

3-phosphooxypyruvate

C1010

ammonia

C8407

5-hydroxyindole acetaldehyde

C8399

5-hydroxytryptophol

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8410

indole-3-glycol aldehyde

C8344

indole-3-glycol

C12102

isobutanol

C13801

3-methylbutanal

C13800

3-methylbutanol

C11976

2-methylbutanal

C13799

2-methylbutanol

C13798

2-phenylethanol

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C12352

(S)-dihydroorotate

C12029

S-ribosyl-L-homocysteine

C11654

selenophosphate

C14179

4-acetamidobutanal

C11982

methylamine

C8393

5-methoxyindoleacetaldehyde

C8394

5-methoxytryptamine

C1342

3,4-dihydroxyphenylacetaldehyde

C8323

tryptamine

C13415

2-hydroxybiphenyl

C1287

4-imidazoleacetate

C12117

imidazole acetaldehyde

C8406

5-hydroxyindole acetate

C13868

propynoate

C15240

prop-2-ynal

C12385

D-glucurono-6,3-lactone

C14137

4-acetamidobutanoate

C11646

dimethylsulfoniopropanoate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C927

carbon monoxide

C3319

4-methyl-2-oxopentanoate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C562

4-methyl-3-oxoadipate

C563

4-methyl-3-oxoadipate-enol-lactone

C12230

formamide

C11895

N-Formyl-L-kynurenine

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C11874

N-succinyl-2-amino-6-ketopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C3417

(S)-3-methyl-2-oxopentanoate

C12192

carbonic acid

C14005

prephytoene diphosphate

C13879

(R)-mevalonate diphosphate

C14074

prenyl diphosphate

C6099

lipid IVA

C10794

lipid A disaccharide (E. coli)

C949

lipid X

C12254

ethanolamine

C3259

2-oxovalerate

C506

3-ethylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C1530

(2R,3S)-3-isopropylmalate

C12125

imidazole acetol-phosphate

C11881

N-methylhydantoin

C13985

(R)-5-phosphomevalonate

C11964

(R)-mevalonate

C11604

thiamine diphosphate

C11606

thiamine phosphate

C8364

indole-3-ethanol

C2191

carbamoyl phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C11690

S-acetyldihydrolipoamide

C12333

dihydrolipoamide

C11838

2-succinylbenzoate

C11865

N6'-acetylkanamycin-B

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11483

glycolate

C11493

2-phosphoglycolate

C1305

4-fumaryl-acetoacetate

C3821

5-methylcytosine

C1002

anthranilate

C14075

N2-succinyl-L-arginine

C11868

N2-succinyl-L-ornithine

C11873

N-succinyl-L,L-2,6-diaminopimelate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C11715

quinolinate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1325

4-amino-4-deoxychorismate

C11756

propionamide

C8366

(indol-3-yl)acetamide

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C13627

DNA without lesion

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C12390

D-erythro-imidazole-glycerol-phosphate

C6030

core oligosaccharide-lipid A (E. coli K-12 core type)

C15320

MLPS

C12584

N-(2,3-dihydroxybenzoyl)-L-serine trimer

C11950

N-(2,3-dihydroxybenzoyl)-L-serine

C15227

N-(2,3-dihydroxybenzoyl)-L-serine dimer

C12164

H2

C3255

2-keto-L-gulonate

C14181

2-maleylacetate

C4674

glutathione disulfide

C14205

4,5-seco-dopa

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C15304

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

C1545

(2Z,4E)-2-aminomuconate

C1544

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

C12325

1,4-dihydroxy-2-naphthoate

C12443

pregn-5-ene-3,20-dione

C12444

pregn-5-ene-3,20-dione-17-ol

C12442

5-androstene-3,17-dione

C1072

5-α-androstan-3β,17β-diol

C11869

N2-succinylglutamate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C12178

histidinal

C11794

3'-phosphoadenylyl-sulfate

C4688

glutathioselenol

C4690

selenodiglutathione

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C1108

acetyl phosphate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C11826

oxalosuccinate

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C335

7-epicholate

C12494

N-acetyl-D-muramate 6-phosphate

C12218

α-D-glucosamine 1-phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C12409

creatinine

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C623

(3S,5S)-3,5-diaminohexanoate

C15181

(S)-5-amino-3-oxohexanoate

C13927

octopamine

C1291

(4-hydroxyphenyl)acetate

C1639

(R)-synephrine

C12324

autoinducer 2

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C3376

(S)-4-hydroxy-2-oxohexanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C1431

3-dehydroshikimate

C12393

D-glycero-β-D-manno-heptose 1-phosphate

C12392

D-glycero-β-D-manno-heptose 1,7-bisphosphate

C11802

4'-phosphopantetheine

C13986

pseudouridine

C12056

L-arginino-succinate

C2331

(enterobacterial common antigen)-undecaprenyl diphosphate

C2364

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

C12054

L-dehydro-ascorbate

C1271

4-oxoglutaramate

C158

cyclic-2,3-O-oxalyl-L-threonate

C163

dehydroascorbate (bicyclic form)

C3290

4-oxalocrotonate

C446

5-hydroxyindole thiazolidine carboxylate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C14153

2,3-dioxo-L-gulonate

C435

bisorganyltrisulfane

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C159

2-carboxy-L-xylonolactone

C160

2-carboxy-L-threo-pentonate

C3536

L-α-amino-ε-keto-pimelate

C5583

L-methionine

C2469

L-phenylalanine

C5592

L-selenocysteine

C5612

L-cysteine

C5597

L-alanine

C12067

glycine

C5603

L-isoleucine

C5588

L-leucine

C5575

L-tryptophan

C5571

L-valine

C5607

L-glutamate

C5609

L-glutamine

C5595

L-cystathionine

C5579

L-serine

C5596

L-aspartate

C5643

L-asparagine

C5573

L-tyrosine

C5584

L-lysine

C5577

L-threonine

C5605

L-histidine

C12073

L-aspartyl-4-phosphate

C5642

L-arginine

C12231

L-ornithine

C5580

L,L-diaminopimelate

C5601

L-isoglutamine

C13322

N-carbamoyl-L-aspartate

C5527

N6-acetyl-N6-hydroxy-L-lysine

C5476

formyl-L-isoglutamine

C5466

N-formimino-L-glutamate

C12303

L-citrulline

C12247

L-homocysteine

C12255

L-cystine

C12245

L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C2426

S-sulfo-L-cysteine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12233

L-glutamate-5-semialdehyde

C12235

L-dopa

C5585

meso-diaminopimelate

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C2449

S-sulfanyl-L-cysteine

C14015

N6-hydroxy-L-lysine

C3628

sarcosine

C3402

3-phospho-L-serine

C8799

D-alanine

C8797

D-glutamate

C11444

N-carbamoylsarcosine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C7757

ADP

C7844

ATP

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7785

hypoxanthine

C7755

2'-deoxyinosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C7809

AMP

C7827

GMP

C7741

IMP

C7652

cyclic-AMP

C7745

GTP

C7795

GDP

C7783

dATP

C7751

dGTP

C5552

5'-deoxyadenosine

C7811

XMP

C7823

dADP

C7807

dGDP

C10266

ppGpp

C10267

pppGpp

C10288

adenylo-succinate

C7837

8-oxo-dGMP

C7647

8-oxo-dGTP

C7743

dAMP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7646

8-oxo-GMP

C7655

8-oxo-GTP

C7649

isoguanine

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C8433

CDP-4-dehydro-6-deoxy-α-D-glucose

C1009

GDP-α-D-mannose

C1015

GDP-α-D-glucose

C8422

CDP-α-D-glucose

C1939

dTDP-α-D-glucose

C1963

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

C7780

UDP-α-D-glucose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C8666

UDP-α-D-galactose

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7790

UDP-N-acetyl-α-D-mannosamine

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C6744

CMP-N-acetyl-β-neuraminate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C9454

adenine

C9455

guanine

C10601

thymine

C8739

uracil

C8707

cytosine

C9540

preQ1

C8770

dUMP

C8744

dTMP

C8755

dCMP

C8733

dCDP

C8752

dUDP

C8720

dTDP

C8772

dCTP

C8724

dUTP

C8764

dTTP

C8714

UDP

C8732

CDP

C4243

β-nicotinamide D-ribonucleotide

C8761

CTP

C8760

UTP

C2245

CMP

C2241

UMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C4020

NAD+

C4018

NADP+

C14500

NADH

C14497

NADPH

C2519

thymidine

C2527

2'-deoxyuridine

C2523

2'-deoxycytidine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C2706

uridine

C2702

cytidine

C6945

5-fluorouracil

C7306

5'-deoxy-5'-fluoroadenosine

C9773

5-fluorocytosine

C11485

D-gluconate

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C6111

kanamycin B

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10356

4-phospho-D-erythronate

C8811

α-D-glucopyranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C2057

α-D-ribose-1-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6673

sucrose 6F-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C8835

β-D-fructofuranose

C2858

glycolaldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C9496

L-sorbosone

C9494

D-glyceraldehyde

C3434

L-sorbosone 2,6-lactone

C3436

L-sorbosone 1,4-lactone

C5458

keto-L-sorbose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C4960

N-acetyl-β-neuraminate

C3731

glycerol

C6569

D-sorbitol

C15321

colanic acid

C10688

maltotriose

C10234

(heptosyl)2-Kdo2-lipid A

C10235

heptosyl-Kdo2-lipid A

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10227

heptosyl-Kdo2-lipid IVA

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10233

glucosyl-(heptosyl)2-Kdo2-lipid A

C10232

glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate

C10231

glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate

C10230

glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10229

galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10228

galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate

C6026

galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10693

sucrose

C6176

α-maltose

C10689

maltotetraose

C10690

maltopentaose

C10691

maltohexaose

C10692

maltoheptaose

C6829

salicylaldehyde

C10966

all-trans-retinol

C3727

all-trans-retinyl palmitate

C4047

3-oxo-24-ethyl-cholest-4-ene

C3955

3-oxo-24-ethyl-cholest-5-ene

C4187

sitosterol

C4141

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

C4101

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

C4235

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

C4121

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

C4007

3,24-dioxo-cholest-4-en-26-oate

C4195

3-oxo-24-ethyl-cholest-4-en-26-oate

C4027

3-oxo-24-ethyl-26-al-cholest-4-ene

C9077

(2E,6E)-farnesyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C528

(2E,6E)-farnesol

C8321

geranyl diphosphate

C10862

15-cis-phytoene

C1611

penicillin N

C1626

isopenicillin N

C2727

enterobactin

C2943

aerobactin

C2901

N1-citryl-N6-acetyl-N6-hydroxy-L-lysine

C9574

betalamate

C9759

portulacaxanthin II

C5119

4-cis-undecenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C5378

geranylgeranyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C1993

di-trans,octa-cis-undecaprenol

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C3117

dioleoyl phosphatidate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10554

1,2-dibutyrin

C10569

tributyrin

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C2758

3,4-dihydroxyphenylglycolaldehyde

C2763

3,4-dihydroxyphenylglycol

C2753

(R)-noradrenaline

C2754

(R)-adrenaline

C2756

dopamine

C2768

catechol

C2762

3,4-dihydroxymandelate

C2760

3,4-dihydroxyphenylacetate

C11919

ethylene glycol

C5871

1-octanol

C3450

ethanol

C3447

propan-1-ol

C14807

phytol

C3449

butan-1-ol

C3448

methanol

C2824

(2E,6E)-farnesal

C2860

fluoroacetaldehyde

C6090

methylglyoxal

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C3649

benzaldehyde

C14804

phytenal

C6246

(S)-lactaldehyde

C3500

acetaldehyde

C3523

1-propanal

C3494

isobutanal

C3529

1-octanal

C3485

butan-1-al

C3483

formaldehyde

C10048

caldariellaquinone

C15317

2',4,4',6'-tetrahydroxychalcone

C5702

a coenzyme-A group

C3308

pyruvate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3351

glyoxylate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C11482

(R)-pantoate

C11517

acetate

C11481

orotate

C11509

fluoroacetate

C4985

(S)-1-pyrroline-5-carboxylate

C2774

pristanate

C3383

palmitate

C3409

octanoate

C3412

decanoate

C3418

butanoate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13210

oleate

C6379

linoleate

C13260

phytenate

C13266

(15Z)-tetracosenoate

C523

(2E,6E)-farnesoate

C6371

3-oxoadipate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C6186

(S)-lactate

C13463

(2R,3S)-2-methylisocitrate

C11476

(R)-glycerate

C8534

cis-aconitate

C8542

(2S,3S)-2-methylcitrate

C8544

cis-2-methylaconitate

C8531

D-threo-isocitrate

C8950

chorismate

C8919

D-glucarate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7139

4-tyrosol

C3093

urate

C11661

(+)-taxifolin

C8060

(2R,3S,4S)-leucopelargonidin

C8056

(2R,3S,4S)-leucocyanidin

C8058

(2R,3S,4S)-leucodelphinidin

C11659

(+)-dihydrokaempferol

C11655

(+)-dihydromyricetin

C13166

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C8775

2-phenylethylamine

C8776

tyramine

C13157

serotonin

C12836

phenol

C1869

caldariellaquinol

C1868

3-demethylubiquinol-9

C1867

3-demethylubiquinol-8

C1865

3-demethylubiquinol-7

C1866

3-demethylubiquinol-10

C1863

demethylmenaquinol-8

C1680

menaquinol-8

C5551

ubiquinol-9

C5543

ubiquinol-8

C5559

ubiquinol-6

C5535

ubiquinol-7

C5563

ubiquinol-10

C8335

(indol-3-yl)acetaldehyde

C8490

3-methoxy-4-hydroxyphenylglycol

C8493

normetanephrine

C8495

metanephrine

C8491

vanillyl mandelate

C13422

hydrogen cyanide

C13354

preQ0

C13382

acrylonitrile

C13366

(indole-3-yl)acetonitrile

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12674

7,8-dihydroneopterin 2',3'-cyclic phosphate

C7129

5,6,7,8-tetrahydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C10988

riboflavin

C10052

FMN

C10053

FAD

C10049

FMNH2

C10050

FADH2

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9861

cobyrinate

C1705

sirohydrochlorin

C2311

precorrin-2

C2305

precorrin-1

C9871

cobalt-precorrin-5A

C9847

cobalt-precorrin-4

C9818

cobalt-precorrin-6A

C9813

cobalt-precorrin-5B

C9842

cobalt-precorrin-6B

C9866

cobalt-precorrin-8

C9837

cobalt-precorrin-7

C9822

cobalt-precorrin-3

C10982

nicotinate

C10996

nicotinamide

C10986

L-ascorbate

C4210

pyridoxal 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4216

pyridoxamine

C4200

pyridoxal

C4208

pyridoxine

C10614

coenzyme A

C5394

(R)-NADHX

C5392

(S)-NADHX

C2598

D-glucono-1,5-lactone

C10100

trans-dienelactone

C10102

cis-dienelactone

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C4901

succinyl-CoA

C4899

3-methylglutaconyl-CoA

C5306

3-methylcrotonyl-CoA

C4911

methylacrylyl-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5298

acetyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C4913

malonyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5314

2-methylacetoacetyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C4920

isovaleryl-CoA

C5014

phenylacetyl-CoA

C4922

isobutanoyl-CoA

C5313

2-methylbutanoyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C4937

3'-dephospho-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C5635

oleoyl-CoA

C10758

3-oxoadipyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6198

3-oxodecanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6201

3-oxododecanoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C14662

hexanoyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C7162

cerotoyl-CoA

C7169

2-carboxy-cerotoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C7343

(S)-malyl-CoA

C11400

phytenoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C1337

crotonyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C11744

17-β-hydroxy-5-α-androstan-3-one

C10546

progesterone

C12483

campesterol

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C11480

phenylacetate

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4498

cholest-4-en-3-one

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4818

3-oxochol-4-en-24-oyl-CoA

C4506

3-oxochol-4,22-dien-24-oyl-CoA

C4541

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

C4519

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

C4571

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C4834

3-oxocholest-4,24-dien-26-oyl-CoA

C4832

(25S)-26-hydroxycholest-4-en-3-one

C4520

(25S)-3-oxocholest-4-en-26-oate

C4512

(25S)-26-oxocholest-4-en-3-one

C11761

17-α-hydroxyprogesterone

C11346

cholest-5-en-3-one

C11342

cholesterol

C6332

cholate

C6358

glycocholate

C6352

isocholate

C6306

3-dehydrocholate

C11726

campest-4-en-3β-ol

C10542

androst-4-ene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C7869

acetamide

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C11221

sn-glycero-3-phosphocholine

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C6592

4-[(2Z)-2-(methylimino)ethyl]phenol

C6595

4-(2-iminoethyl)phenol

C2179

choline

C10301

agmatine

C3574

spermidine

C3548

putrescine

C3564

spermine

C3592

N-acetylputrescine

C3583

N1-acetylspermine

C3610

N1-acetylspermidine

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C6522

4-[(E)-2-(methylamino)ethenyl]phenol

C6527

4-[(Z)-2-aminoethenyl]phenol

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C8496

N-acetyl-L-glutaminyl-L-glutamine

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7864

Fe3+

C4320

H+

C4318

K+

C4328

ammonium

C11023

Fe2+

C11011

Cu2+

C11009

Mg2+

C11006

Co2+

C7036

hydrogencarbonate

C7024

thiosulfate

C7028

nitrite

C7022

selenide

C7016

sulfite

C7030

nitrate

C7014

sulfate

C8958

superoxide

C7020

selenate

C7017

selenite

C7034

hydrogensulfite

C7025

OH-

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C1689

trimethyl sulfonium

C4768

3-(methylsulfanyl)propanal

C4704

methionol

C4742

3-dimethylsulfoniopropionaldehyde

C4734

dimethyl sulfide

C4606

S-(hydroxymethyl)glutathione

C4026

2'-hydroxybiphenyl-2-sulfinate

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C3978

thiocyanate

C4644

S-sulfanylglutathione

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C8962

nitric oxide

C8965

hydroxyl radical

C8959

monodehydroascorbate radical

C6290

(S)-3-hydroxy-isobutanoate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6766

dTDP-4-amino-4,6-dideoxy-α-D-galactose

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C7121

oxygen

C7118

hydrogen sulfide

C9817

3,8-divinyl protochlorophyllide a

C9836

protochlorophyllide a

C9850

chlorophyllide a

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7658

uroporphyrinogen-III

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9865

Mg-protoporphyrin

C6408

(Z,Z)-biliverdin-IX α

C7632

siroheme

C6624

protoheme

C2255

N2

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9845

cobalt-sirohydrochlorin

C9821

cobalt-factor III

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C803

ethylphosphate

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal