an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dehydroascorbate (bicyclic form)

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

cyclic-2,3-O-oxalyl-L-threonate

5-hydroxyindole thiazolidine carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

aminoacetone

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

pyruvic oxime

ammonia

L-dehydro-ascorbate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

α-D-galacturonate 1-phosphate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

1-(methylsulfanyl)xylulose 5-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

pimelate

autoinducer 2

2-amino-3-carboxymuconate-6-semialdehyde

α-D-glucosamine 1-phosphate

N-acetyl-D-muramate 6-phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

carbon monoxide

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-chloro-4-methyl-cis,cis-muconate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

dethiobiotin

2-succinylbenzoate

(S)-mandelate

(R)-mandelate

muconolactone

(+)-muconolactone

cis,cis-muconate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

5-amino-6-(D-ribitylamino)uracil

(R)-pantothenate

3-deoxy-D-manno-octulosonate 8-phosphate

5-dehydro-D-gluconate

dihydrolipoamide

lipoamide

preuroporphyrinogen

carbonic acid

1-deoxy-L-glycero-tetrulose 4-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

methylamine

4-aminobutanoate

butanoyl phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

ADP-L-glycero-β-D-manno-heptose

CDP-glycerol

shikimate

shikimate 3-phosphate

4-guanidinobutyramide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(S)-2-amino-6-oxohexanoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

4-pyridoxolactone

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

canavaninosuccinate

orotidine 5'-phosphate

acetyl phosphate

4-amino-2-methyl-5-pyrimidinemethanol

hydrogen peroxide

carboxynorspermidine

norspermidine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

hydroxylamine

2-dehydropantoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

3-deoxy-α-D-manno-2-octulosonate

histidinal

imidazole acetol-phosphate

adenosine 3',5'-bisphosphate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

xanthine

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

β-D-ribosylnicotinate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

hydroxypyruvate

vanillin

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

pimeloyl-CoA

8-amino-7-oxononanoate

2-oleoylglycerol

4-amino-4-deoxychorismate

(S)-dihydroorotate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

indole-3-glycol

indole-3-glycol aldehyde

2-methylbutanol

2-methylbutanal

isobutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

3-methylbutanol

3-methylbutanal

2-phenylethanol

5-phospho-β-D-ribosylamine

lipid IV_A

(S)-2,3,4,5-tetrahydrodipicolinate

nicotinate adenine dinucleotide

1,4-dihydroxy-2-naphthoate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

oxalosuccinate

citrate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

5-enolpyruvoyl-shikimate 3-phosphate

L-canavanine

urea

isopentenyl diphosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

DNA without lesion

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

β-nicotinate D-ribonucleotide

quinolinate

chloramphenicol

γ-L-glutamyl 5-phosphate

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

S-ribosyl-L-homocysteine

1,6-anhydro-N-acetyl-β-muramate

lipid X

lipid A disaccharide (E. coli)

ethanolamine

(L-threonylcarbamoyl)adenylate

enol-phenylpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

prephenate

glycerone phosphate

2-C-methyl-D-erythritol 4-phosphate

3-amino-1-hydroxyacetone 1-phosphate

(S)-3-methyl-2-oxopentanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-fumaryl-acetoacetate

acetoacetate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

carbamoyl phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

L-histidinol phosphate

histidinol

2-phosphoglycolate

glycolate

thiamine phosphate

3-dehydroquinate

3-dehydroshikimate

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-β-D-glucuronide

oxaloacetate

phosphoenolpyruvate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

D-erythro-imidazole-glycerol-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-keto-β-D-galactose

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

scopolin

4-hydroxybenzaldehyde

cis-coumarinic acid-β-D-glucoside

4-methylumbelliferyl glucoside

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

H₂

coproporphyrinogen III

hydrogen selenide

O-acetyl-L-serine

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

CO₂

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

H₂O

sulfate

hydrogensulfite

selenide

nitrate

sulfite

superoxide

hydrogencarbonate

thiosulfate

phosphate

triphosphate

diphosphate

chloride

Fe³⁺

Fe²⁺

Mg²⁺

K⁺

ammonium

H⁺

trimethyl sulfonium

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

glutathione

(R)-S-lactoylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

thiocyanate

methanethiol

S-sulfanylglutathione

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

spermidine

putrescine

glycine betaine

choline sulfate

choline

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

glycerol

galactitol

butan-1-ol

propan-1-ol

ethanol

phytol

myo-inositol

1D-myo-inositol 3-monophosphate

phytate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

protocatechuate

4,6-dichloro-3-methylcatechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

ethylene glycol

(S)-propane-1,2-diol

(R)-propane-1,2-diol

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

coprostanone

cholest-4-en-3-one

4,5α-dihydrocortisone

cortisone

5-α-pregnane-3,20-dione

progesterone

estrone

17-β-hydroxy-5-α-androstan-3-one

testosterone

3-β-hydroxyandrost-5-en-17-one

3-dehydrocholate

isocholate

glycocholate

cholate

phenylacetate

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-dienelactone

3-chloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconate

3,5-dichloro-2-methyl-muconolactone

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

cephalosporin C

deacetylcephalosporin C

nicotinamide

N-acetyl-β-neuraminate

(R)-pantoate

D-gluconate

orotate

D-mannonate

acetate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

aldehydo-D-glucuronate

β-D-glucuronate

aldehydo-D-galacturonate

L-α-amino-ε-keto-pimelate

L-saccharopine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

O-acetyl-L-homoserine

3-phospho-L-serine

sarcosine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

L-methionine

L-proline

L-phenylalanine

L-valine

L-leucine

L-tryptophan

L-alanine

L-isoleucine

glycine

L-selenocysteine

L-cysteine

L-tyrosine

L,L-diaminopimelate

L-ornithine

L-threonine

L-asparagine

L-arginine

L-lysine

L-glutamine

L-glutamate

L-histidine

L-aspartate

L-serine

L-cystathionine

L-citrulline

O-phospho-L-homoserine

L-homoserine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-canaline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

S-sulfo-L-cysteine

L-homocysteine

meso-diaminopimelate

L-threo-3-phenylserine

β-alanine

D-glutamate

D-alanine

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

3-methyl-cis,cis-muconate

chorismate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

(S)-malate

(R)-glycerate

(R)-lactate

propanoate

formate

pyruvate

butanoate

decanoate

octanoate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-aminobenzoate

palmitate

pristanate

(15Z)-tetracosenoate

oleate

phytenate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

glycolaldehyde

β-D-galactopyranose

α-D-galactopyranose

α-D-glucopyranose

β-D-glucopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

L-glyceraldehyde

methylglyoxal

phytenal

butan-1-al

formaldehyde

acetaldehyde

1-propanal

isobutanal

(R)-lactaldehyde

(S)-lactaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

diacetyl

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

3'-ketolactose

lotaustralin

neolinustatin

linustatin

linamarin

taxiphyllin

UDP-α-D-galactose

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-phospho-α-D-ribose 1-diphosphate

L-rhamnulose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

CMP-N-acetyl-β-neuraminate

CMP-3-deoxy-β-D-manno-octulosonate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

ADP-α-D-glucose

cyclic ADP-ribose

ADP-D-ribose

UDP-α-D-galacturonate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-glyceraldehyde 3-phosphate

β-D-fructofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

keto-D-fructose

D-ribulose

D-xylulose

L-ribulose

maltotetraose

maltotriose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

melibiose

sucrose

allolactose

α,α-trehalose

α-lactose

β-D-cellobiose

α-kojibiose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

stachyose

raffinose

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

L-gulonate

aldehydo-L-galactonate

L-idonate

D-altronate

D-glucono-1,5-lactone

L-galactono-1,4-lactone

cis-dienelactone

5-chloro-3-methyl-cis-dienelactone

CoA-disulfide

linoleoyl-CoA

α-linolenoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

phenylacetyl-CoA

succinyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

3'-dephospho-CoA

malonyl-CoA

acetyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

oleoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

butanoyl-CoA

propanoyl-CoA

palmitoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

achromobactin

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

vanillylamine

4-methylumbelliferone

coumarin

scopoletin

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

urate

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

coumarinate

luteolin

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-8

menaquinol-6

menaquinol-7

chloramphenicol 3-acetate

guanine

adenine

hypoxanthine

dAMP

dGMP

dIMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

XTP

ITP

GTP

ATP

IDP

GDP

ADP

AMP

GMP

XMP

IMP

2'-deoxyadenosine

2'-deoxyguanosine

xanthosine

guanosine

inosine

adenosine

7,8-dihydrolumazine

FAD

riboflavin

FMN

FADH₂

reduced riboflavin

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

dCMP

dUMP

dTMP

dTDP

dTTP

CDP

dUDP

dUTP

dCDP

dCTP

UDP

UTP

uracil

CTP

UMP

CMP

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

preQ₁

cob(I)alamin

adenosylcobalamin

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

5'-deoxyadenosine

adenylo-succinate

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

2-iminobutanoate

2-iminosuccinate

DNA with lesion

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

Mg-protoporphyrin

protoheme

hydrogen cyanide

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

monodehydroascorbate radical

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

D-alanyl-D-alanine

preQ₀

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

coenzyme A

(R)-NADHX

(S)-NADHX

L-ascorbate

nicotinate

thiamine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxal

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate