ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1196

S-methyl-5'-thioadenosine

C1038

α-ribazole

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C1325

4-amino-4-deoxychorismate

C1098

acrylamide

C1096

acrylate

C1303

4-guanidinobutyramide

C13919

4-guanidinobutanoate

C8366

(indol-3-yl)acetamide

C11756

propionamide

C12325

1,4-dihydroxy-2-naphthoate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C15215

(L-threonylcarbamoyl)adenylate

C12146

hydroxylamine

C4883

2-oleoylglycerol

C12254

ethanolamine

C12016

(lipoyl)adenylate

C11604

thiamine diphosphate

C11754

propanoyl phosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C11996

macrocin

C13627

DNA without lesion

C13928

urea-1-carboxylate

C12494

N-acetyl-D-muramate 6-phosphate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C14074

prenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C12230

formamide

C1285

4-imidazolone-5-propanoate

C11930

N-acetylglutamyl-phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C8364

indole-3-ethanol

C12324

autoinducer 2

C655

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

C13417

2-isopropylmaleate

C6574

(S)-ureidoglycolate

C7865

urea

C1553

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

C12375

2-deoxygluconate

C12374

3-dehydro-2-deoxy-D-gluconate

C14184

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

C3482

dihydroxyacetone

C1198

5-dehydro-4-deoxy-D-glucarate

C11723

L-quinate

C1431

3-dehydroshikimate

C11653

shikimate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C12369

3-dehydroquinate

C11760

prephenate

C11483

glycolate

C12031

S-Inosyl-L-homocysteine

C12315

5,6-dimethylbenzimidazole

C1036

α-ribazole 5'-phosphate

C11767

porphobilinogen

C12139

preuroporphyrinogen

C11711

(R)-1-amino-2-propanol O-2-phosphate

C11557

urocanate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C1112

ManNAc-GlcNAc-PP-undecaprenol

C11832

orotidine 5'-phosphate

C12402

cyclohex-1,5-diene-1-carbonyl-CoA

C6597

3-ureidopropanoate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C12352

(S)-dihydroorotate

C11715

quinolinate

C7349

chloramphenicol

C11639

succinate semialdehyde

C6361

acetoacetate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C8938

oxalate

C463

4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate

C13998

4-(2-aminophenyl)-2,4-dioxobutanoate

C11988

mesaconate

C11800

(R)-pantothenate

C12218

α-D-glucosamine 1-phosphate

C13913

N-carbamoylputrescine

C11634

tartronate semialdehyde

C11836

hydroxypyruvate

C3279

2-oxopent-4-enoate

C3269

(S)-4-hydroxy-2-oxopentanoate

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C891

citrate

C13635

β-D-ribosylnicotinate

C12214

(S)-4-amino-5-oxopentanoate

C1231

5-aminolevulinate

C2325

α-D-galactosyl-diphosphoundecaprenol

C3338

2-oxoglutaramate

C12048

γ-L-glutamyl 5-phosphate

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C933

L-canavanine

C12056

L-arginino-succinate

C10349

glycerone phosphate

C11857

β-nicotinate D-ribonucleotide

C9422

nicotinate adenine dinucleotide

C11654

selenophosphate

C873

coproporphyrinogen III

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C1438

(2S)-2-isopropylmalate

C1491

citraconate

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C12029

S-ribosyl-L-homocysteine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1024

aminoacetone

C3656

D-gluconate 6-phosphate

C1353

3-phosphooxypyruvate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C12178

histidinal

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C12176

histidinol

C1268

(R)-4'-phosphopantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11802

4'-phosphopantetheine

C1108

acetyl phosphate

C12364

isopentenyl diphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C1445

adenosine 3',5'-bisphosphate

C12274

enol-phenylpyruvate

C6444

oxaloacetate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C11479

phosphoenolpyruvate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11539

xanthine

C2191

carbamoyl phosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C11978

methylarsonite

C12318

cacodylate

C11980

methylarsonate

C13723

arsenite

C1002

anthranilate

C11946

N-(5-phosphoribosyl)-anthranilate

C3593

4-methylbenzyl alcohol

C3591

3-methylbenzyl alcohol

C3633

3-methylbenzaldehyde

C1531

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

C565

4-methylmuconolactone

C12164

H2

C15014

N-acetyl-L,L-2,6-diaminopimelate

C1528

2-dehydropantoate

C15207

(2S,5S)-hexanediol

C15208

2,5-hexanedione

C927

carbon monoxide

C928

CO2

C13798

2-phenylethanol

C13799

2-methylbutanol

C11976

2-methylbutanal

C13800

3-methylbutanol

C13801

3-methylbutanal

C12102

isobutanol

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C12162

hydrogen peroxide

C3821

5-methylcytosine

C11543

H2O

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C12054

L-dehydro-ascorbate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12068

kynurenate

C11534

xanthurenate

C446

5-hydroxyindole thiazolidine carboxylate

C14152

pyruvic oxime

C1271

4-oxoglutaramate

C13983

α-D-galacturonate 1-phosphate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C352

2-iminoacetate

C12848

N5-carboxyaminoimidazole ribonucleotide

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C13909

CDP-glycerol

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C13912

3,5-dihydro-4H-imidazol-4-one

C13967

4-aminoimidazole

C1323

5-aminoimidazole-4-carboxylate

C6618

5-ureidoimidazole-4-carboxylate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C1010

ammonia

C12492

1,6-anhydro-N-acetyl-β-muramate

C1321

4-aminobutanoate

C15156

dialurate

C12394

6-phospho D-glucono-1,5-lactone

C996

adenosine 5'-phosphosulfate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11826

oxalosuccinate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C10799

DNA with lesion

C3940

carboxyphosphinopyruvate

C4751

3-(hydroxyphosphinoyl)pyruvate

C3869

1-carboxyvinyl carboxyphosphonate

C9874

cob(I)alamin

C9823

cob(I)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9800

adenosylcobyrate

C1218

adenosylcobalamin 5'-phosphate

C5221

adenosylcobalamin

C9865

Mg-protoporphyrin

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9799

cobalt-precorrin-2

C9845

cobalt-sirohydrochlorin

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9817

3,8-divinyl protochlorophyllide a

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9850

chlorophyllide a

C9836

protochlorophyllide a

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C6624

protoheme

C2255

N2

C7676

protoporphyrin IX

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7632

siroheme

C7118

hydrogen sulfide

C7121

oxygen

C8419

sn-glycerol 3-phosphate

C6427

2,3-diphospho-D-glycerate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6744

CMP-N-acetyl-β-neuraminate

C6755

(R)-citramalate

C6757

(S)-citramalate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6290

(S)-3-hydroxy-isobutanoate

C8186

(R)-2-hydroxyglutarate

C8959

monodehydroascorbate radical

C8958

superoxide

C8539

cyanophycin primer

C8543

cyanophycin primer-L-aspartate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C13088

chloramphenicol 3-acetate

C4960

N-acetyl-β-neuraminate

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4734

dimethyl sulfide

C4678

glutathione

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C12581

taurine

C2209

(2R)-3-sulfolactate

C7994

(2R)-phospho-3-sulfolactate

C7864

Fe3+

C4328

ammonium

C4318

K+

C4320

H+

C11009

Mg2+

C11023

Fe2+

C10999

Cd2+

C11006

Co2+

C11011

Cu2+

C11019

Ca2+

C1689

trimethyl sulfonium

C7016

sulfite

C7022

selenide

C7036

hydrogencarbonate

C7028

nitrite

C7030

nitrate

C7024

thiosulfate

C7014

sulfate

C7034

hydrogensulfite

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C10301

agmatine

C3548

putrescine

C3574

spermidine

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C11232

3-chloro-cis,cis-muconate

C11268

2-chloro-5-methyl-dienelactone

C11263

3,5-dichloro-2-methyl-muconate

C11265

3,5-dichloro-2-methyl-muconolactone

C11271

2-chloro-5-methyl-maleylacetate

C11266

3-chloro-2-methyl-dienelactone

C11270

3-chloro-2-methyl-maleylacetate

C3589

3-chlorobenzyl alcohol

C3645

3-chlorobenzaldehyde

C5760

2,4-dichlorotoluene

C5785

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

C5697

4,6-dichloro-3-methylcatechol

C7685

allantoate

C7869

acetamide

C9539

(S)-(+)-allantoin

C8033

5-amino-4-imidazolecarboxyamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C10996

nicotinamide

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C4818

3-oxochol-4-en-24-oyl-CoA

C14427

17β-estradiol

C14431

estrone

C9096

(indol-3-yl)acetate

C5316

(R)-2-hydroxyglutaryl-CoA

C4927

(E)-glutaconyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4192

chenodeoxycholoyl-CoA

C4961

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

C4196

choloyl-CoA

C4901

succinyl-CoA

C5188

dihomo γ-linolenoyl-CoA

C4981

CoA-disulfide

C5294

benzoyl-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C4933

formyl-CoA

C4907

oxalyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C4913

malonyl-CoA

C5304

(3S)-citryl-CoA

C4937

3'-dephospho-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C5154

(3E)-tetradec-3-enoyl-CoA

C4922

isobutanoyl-CoA

C5298

acetyl-CoA

C5302

4-hydroxybutanoyl-CoA

C4911

methylacrylyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C5890

myristoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C5887

icosanoyl-CoA

C2873

pristanoyl-CoA

C2008

acetoacetyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C10102

cis-dienelactone

C10076

L-galactono-1,4-lactone

C5185

tylosin

C2598

D-glucono-1,5-lactone

C10049

FMNH2

C10050

FADH2

C10052

FMN

C10053

FAD

C5392

(S)-NADHX

C5394

(R)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C1680

menaquinol-8

C1679

menaquinol-6

C1672

menaquinol-7

C1863

demethylmenaquinol-8

C1857

demethylmenaquinol-6

C1860

demethylmenaquinol-7

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C10611

(R)-lipoate

C10614

coenzyme A

C6007

MoO2-molybdopterin cofactor

C6003

guanylyl molybdenum cofactor

C7129

5,6,7,8-tetrahydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10994

thiamine

C10986

L-ascorbate

C10982

nicotinate

C10988

riboflavin

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C10143

menadione

C4985

(S)-1-pyrroline-5-carboxylate

C2308

precorrin-6A

C2302

precorrin-3A

C2317

precorrin-6B

C2323

precorrin-7

C2297

precorrin-8x

C2314

precorrin-3B

C2320

precorrin-4

C2300

precorrin-5

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C2001

hydantoin

C12742

7,8-dihydrolumazine

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12714

7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C10609

7,8-dihydropteroate

C9455

guanine

C9454

adenine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C15085

guanosine

C15091

inosine

C15094

xanthosine

C15088

adenosine

C7785

hypoxanthine

C2226

purine

C7751

dGTP

C7783

dATP

C7807

dGDP

C7823

dADP

C7795

GDP

C7757

ADP

C7741

IMP

C7827

GMP

C7811

XMP

C7809

AMP

C7745

GTP

C7844

ATP

C8747

uridine 2'3'-cyclic monophosphate

C6462

uridine 3'-monophosphate

C8750

cytidine 2',3'-cyclic monophosphate

C6460

cytidine-3'-monophosphate

C11481

orotate

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C8772

dCTP

C8760

UTP

C8764

dTTP

C8733

dCDP

C8732

CDP

C8714

UDP

C8724

dUTP

C8770

dUMP

C8761

CTP

C8707

cytosine

C8739

uracil

C8720

dTDP

C8744

dTMP

C8755

dCMP

C8567

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

C8559

UDP-2-acetamido-2,6-dideoxy-α-D-xylo-hex-4-ulose

C7804

UDP-α-D-galactofuranose

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7790

UDP-N-acetyl-α-D-mannosamine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C8666

UDP-α-D-galactose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7780

UDP-α-D-glucose

C7722

UDP-α-D-glucuronate

C7764

UDP-α-D-galacturonate

C7794

UDP-N-acetyl-α-D-quinovosamine

C7826

UDP-N-acetyl-α-D-fucosamine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1939

dTDP-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C6945

5-fluorouracil

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C2519

thymidine

C10601

thymine

C2241

UMP

C2245

CMP

C9540

preQ1

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C6934

4-hydroxybenzoate

C3093

urate

C3587

benzyl alcohol

C7139

4-tyrosol

C6920

8-hydroxypurine

C7151

6,8-dihydroxypurine

C8490

3-methoxy-4-hydroxyphenylglycol

C3651

4-methylbenzaldehyde

C3649

benzaldehyde

C3647

phenylacetaldehyde

C3641

(4-hydroxyphenyl)acetaldehyde

C8335

(indol-3-yl)acetaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C6043

4-methylphenol

C2768

catechol

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C11421

protocatechuate

C8974

4-aminobenzoate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C8950

chorismate

C8934

3-methyl-cis,cis-muconate

C6449

(4S)-4-hydroxy-2-oxoglutarate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8919

D-glucarate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8534

cis-aconitate

C8538

(2R)-homocitrate

C8555

cis-homoaconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C951

4-hydroxybutanoate

C11212

(R)-3-hydroxybutanoate

C6185

(R)-lactate

C6186

(S)-lactate

C3420

propanoate

C3421

formate

C3308

pyruvate

C11517

acetate

C3418

butanoate

C3415

laurate

C3412

decanoate

C3409

octanoate

C6371

3-oxoadipate

C13266

(15Z)-tetracosenoate

C13210

oleate

C6375

di-homo-γ-linolenate

C6379

linoleate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C10590

α-linolenate

C13260

phytenate

C3381

arachidate

C3391

myristate

C3387

stearate

C3383

palmitate

C11485

D-gluconate

C11482

(R)-pantoate

C2021

aldehydo-D-galacturonate

C2047

aldehydo-D-glucuronate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3257

2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3526

L-kynurenine

C3536

L-α-amino-ε-keto-pimelate

C5579

L-serine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C11434

(R)-3-amino-2-methylpropanoate

C5581

L-proline

C5588

L-leucine

C12067

glycine

C5597

L-alanine

C5609

L-glutamine

C8797

D-glutamate

C5607

L-glutamate

C5584

L-lysine

C5642

L-arginine

C5605

L-histidine

C5573

L-tyrosine

C5577

L-threonine

C5643

L-asparagine

C5612

L-cysteine

C2469

L-phenylalanine

C5575

L-tryptophan

C8805

D-aspartate

C8799

D-alanine

C12073

L-aspartyl-4-phosphate

C12201

L-2-amino-3-oxobutanoate

C6532

(2S, 3S)-3-methylaspartate

C5553

N-formimino-glycine

C13320

N-carbamoylglycine

C5478

N-formyl-L-glutamate

C5473

L-2-acetamido-6-oxoheptanedioate

C5476

formyl-L-isoglutamine

C5466

N-formimino-L-glutamate

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C10823

3-hydroxy-L-kynurenine

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C12303

L-citrulline

C5571

L-valine

C5603

L-isoleucine

C12237

L-canaline

C12245

L-homoserine

C12227

O-succinyl-L-homoserine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12233

L-glutamate-5-semialdehyde

C2426

S-sulfo-L-cysteine

C12247

L-homocysteine

C12231

L-ornithine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12261

hypoglycin A

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5583

L-methionine

C5580

L,L-diaminopimelate

C5601

L-isoglutamine

C5595

L-cystathionine

C6090

methylglyoxal

C2040

diacetyl

C10060

(R)-acetoin

C2858

glycolaldehyde

C3494

isobutanal

C3523

1-propanal

C3483

formaldehyde

C3500

acetaldehyde

C3485

butan-1-al

C6246

(S)-lactaldehyde

C14804

phytenal

C9494

D-glyceraldehyde

C5533

L-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2063

β-D-ribopyranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C6134

α-L-rhamnopyranose

C6133

β-L-rhamnopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3447

propan-1-ol

C3448

methanol

C3450

ethanol

C3449

butan-1-ol

C14807

phytol

C3731

glycerol

C6555

galactitol

C6569

D-sorbitol

C6571

L-iditol

C11919

ethylene glycol

C11911

(R,R)-2,3-butanediol

C10522

scyllo-inosose

C10526

1-amino-1-deoxy-scyllo-inositol

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C668

iron(III) dicitrate

C666

ferric-enterobactin complex

C4086

1-(β-D ribofuranosyl)nicotinamide

C10693

sucrose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C5458

keto-L-sorbose

C2012

keto-D-fructose

C8835

β-D-fructofuranose

C7089

keto-L-rhamnulose

C2143

D-xylulose

C7173

L-ribulose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C10381

a peptidoglycan dimer (mycobacteria)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3126

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3124

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

C3135

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C1015

GDP-α-D-glucose

C1009

GDP-α-D-mannose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10356

4-phospho-D-erythronate

C10324

D-tagatofuranose 1,6-bisphosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2116

β-D-galactose 6-phosphate

C2115

α-D-galactose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10607

L-ribulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8817

L-rhamnulose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C7652

cyclic-AMP

C7645

guanosine 2',3'-cyclic monophosphate

C7653

guanosine 3'-monophosphate

C7841

adenosine 2',3'-cyclic monophosphate

C7641

adenosine 3'-monophosphate

C10267

pppGpp

C10266

ppGpp

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5552

5'-deoxyadenosine

C10288

adenylo-succinate

C9419

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

C9420

two adjacent thymidines in DNA

C9773

5-fluorocytosine

C4240

reduced β-nicotinamide D-ribonucleotide

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C1817

cyclic di-3',5'-guanylate

C11520

hypoglycin B