an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

coproporphyrinogen III

isopentenyl diphosphate

tartronate semialdehyde

indole-3-glycol aldehyde

indole-3-glycol

2-methylbutanal

2-methylbutanol

isobutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methylbutanal

3-methylbutanol

2-phenylethanol

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

hydrogen peroxide

acetoacetate

4-fumaryl-acetoacetate

oxalate

4-aminobutanoate

4-(γ-L-glutamylamino)butanoate

L-histidinol phosphate

imidazole acetol-phosphate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

D-glucurono-6,3-lactone

carbonic acid

3-dehydroshikimate

3-dehydroquinate

L-β-lysine

xanthine

succinate semialdehyde

acetyl phosphate

quinolinate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

selenophosphate

L-arginino-succinate

L-canavanine

canavaninosuccinate

nicotinate adenine dinucleotide

4'-phosphopantetheine

thiamine diphosphate

(R)-4'-phosphopantothenoyl-L-cysteine

lipoamide

dihydrolipoamide

histidinol

(2S)-2-isopropylmalate

citrate

oxalosuccinate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

urea

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-phosphooxypyruvate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

S-Inosyl-L-homocysteine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

(R)-2,3-dihydroxy-3-methylpentanoate

ethanolamine

prephenate

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

prenyl diphosphate

aminoacetone

O-ureido-L-homoserine

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-oxo-L-proline

O-acetyl-L-serine

hydrogen selenide

(lipoyl)adenylate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

histidinal

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

D-erythro-imidazole-glycerol-phosphate

3-mercaptopyruvate

anthranilate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

4-amino-4-deoxychorismate

(S)-dihydroorotate

2-(α-hydroxyethyl)thiamine diphosphate

hydroxylamine

(S)-4-hydroxy-2-oxopentanoate

diethylthiophosphate

dimethylthiophosphate

diethylphosphate

3'-phosphoadenylyl-sulfate

2-oleoylglycerol

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

pregn-5-ene-3,20-dione

(L-threonylcarbamoyl)adenylate

β-D-fructose 2,6-bisphosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

DNA without lesion

urea-1-carboxylate

2-maleylacetate

(4-hydroxyphenyl)acetate

(2R,4S)-2, 4-diaminopentanoate

(S)-2,3-dihydrodipicolinate

1,6-anhydro-N-acetyl-β-muramate

carbon tetrachloride

hydroxypyruvate

ammonia

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

glutathione disulfide

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

(2R)-2-amino-4-oxopentanoate

dialurate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

pyruvic oxime

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

N-acetyl-L,L-2,6-diaminopimelate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-iminoacetate

4-amino-2-methyl-5-pyrimidinemethanol

glutathioselenol

selenodiglutathione

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-amino-3-carboxymuconate-6-semialdehyde

mercuriphenyl acetate

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

pseudouridine

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

L-dehydro-ascorbate

butanoyl phosphate

CO₂

3-methyl-2-oxobutanoate

α-D-glucosamine 1-phosphate

phosphoenolpyruvate

H₂O

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

N-acetyl-β-glucosaminylamine

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

4-imidazolone-5-propanoate

carbon monoxide

carbamoyl phosphate

orotidine 5'-phosphate

2-dehydropantoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-hydroxypropanal

1,3-propanediol

scopolin

4-hydroxybenzaldehyde

cis-coumarinic acid-β-D-glucoside

4-methylumbelliferyl glucoside

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

glycerone phosphate

pseudouridine 5'-phosphate

chloramphenicol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

autoinducer 2

S-ribosyl-L-homocysteine

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(R)-4'-phosphopantothenate

(R)-pantothenate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

H₂

dihydrolipoate

5-aminopentanoate

(S)-2,3,4,5-tetrahydrodipicolinate

3-ureidopropanoate

oxaloacetate

salicyl alcohol

3-oxopropanoate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

L-selenocystathionine

(R)-2-hydroxyglutarate

2-octaprenylphenol

5,10-methenyltetrahydrofolate mono-L-glutamate

superoxide

nitric oxide

trichloromethyl radical

dichlorocarbene

monodehydroascorbate radical

1-oleoyl-2-lyso-glycerone phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

Hg⁰

hydrogen sulfide

oxygen

uroporphyrinogen-I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

hemin

siroheme

protoheme

N₂

nitrous oxide

hydrogen cyanide

cob(I)yrinate a,c-diamide

cob(I)inamide

cob(I)alamin

cobyrinate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobalamin

adenosylcobalamin 5'-phosphate

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide

phosphonoacetaldehyde

DNA with lesion

hypoglycin B

L-α-amino-ε-keto-pimelate

L-leucine

L-glutamine

glycine

L-proline

L-alanine

L-serine

L-lysine

L-arginine

L-histidine

L-glutamate

D-glutamate

β-alanine

(R)-3-amino-2-methylpropanoate

D-serine

L-citrulline

L-isoleucine

L-valine

L-phenylalanine

L-tyrosine

L-methionine

L-cysteine

L-aspartate

L-asparagine

L-threonine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

hypoglycin A

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homoserine

O-phospho-L-homoserine

L-ornithine

L-homocysteine

L-aspartate 4-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

D-ornithine

meso-diaminopimelate

L-selenocysteine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-cystathionine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-carbamoyl-L-aspartate

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-α-acetyl lysine methyl ester

O-acetyl-L-homoserine

N-formimino-glycine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

(2S, 3S)-3-methylaspartate

D-aspartate

D-alanine

D-proline

4-methylphenol

hippurate

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyadenosine

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

AMP

ADP

ATP

5'-deoxyadenosine

GMP

XMP

IMP

pppGpp

GTP

ppGpp

GDP

adenylo-succinate

dGDP

dGTP

dADP

dATP

hypoxanthine

5'-deoxy-5'-fluoroadenosine

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

NADH

NADPH

NAD⁺

NADP⁺

preQ₁

adenine

purine

guanine

thymine

uracil

uridine 3'-monophosphate

cytidine-3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dUDP

dCDP

dTDP

dUTP

dCTP

dTTP

dUMP

dCMP

dTMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

CMP

UMP

UDP

CDP

CTP

UTP

5,6-dihydrothymine

5,6-dihydrouracil

UDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

GDP-α-D-mannose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

xanthosine

guanosine

inosine

adenosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

cytidine

uridine

dipicolinate

orotate

(S)-1-pyrroline-5-carboxylate

7,8-dihydrolumazine

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

cyclic pyranopterin phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

FMNH₂

reduced riboflavin

FADH₂

riboflavin

FMN

FAD

sirohydrochlorin

precorrin-1

precorrin-2

precorrin-6B

precorrin-8x

precorrin-7

precorrin-5

precorrin-4

precorrin-3B

precorrin-6A

hydantoin

coumarin

scopoletin

4-methylumbelliferone

4-nitrophenol

parathion

paraoxon

chloramphenicol 3-acetate

4-tyrosol

urate

6,8-dihydroxypurine

8-hydroxypurine

benzene

salicylaldehyde

4,6-dichloro-3-methylcatechol

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

catechol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

2,3-dihydroxybenzoate

menadiol

4-aminophenol

salicylate

4-aminobenzoate

benzoate

(indol-3-yl)acetaldehyde

coumarinate

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

amino-parathion

methyl parathion

1,2-dibutyrin

tributyrin

all-trans-retinal

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

β-carotene 15,15' epoxide

β-carotene

15,15'-dihydroxy-β-carotene

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

ferrichrome

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

3-chloro-2-methyl-dienelactone

D-glucono-1,5-lactone

2-methylacetoacetyl-CoA

vinylacetyl-CoA

CoA-disulfide

3'-dephospho-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

succinyl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

4-hydroxybutanoyl-CoA

(S)-3-aminobutanoyl-CoA

formyl-CoA

oxalyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

glutaryl-CoA

isobutanoyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

oleoyl-CoA

butanoyl-CoA

propanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

crotonyl-CoA

D-gluconate

aldehydo-L-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

β-D-cellobiose

maltotriose

sucrose

α-kojibiose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

D-glyceraldehyde

glycolaldehyde

D-xylulose

keto-D-fructose

β-D-fructofuranose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-neuraminate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

glycerol

L-iditol

D-sorbitol

D-mannitol 1-phosphate

galactitol 1-phosphate

D-sorbitol 6-phosphate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

L-fuculose 1-phosphate

α-D-mannose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

keto-L-tagatose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

lotaustralin

neolinustatin

linamarin

linustatin

taxiphyllin

methyl β-D-glucoside 6-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

D-ribulose-1,5-bisphosphate

aldehydo-D-galacturonate

(2E,6E)-farnesal

fluoroacetaldehyde

(S)-lactaldehyde

1-propanal

1-octanal

formaldehyde

butan-1-al

acetaldehyde

isobutanal

phytenal

methylglyoxal

diacetyl

menadione

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

pyruvate

2-oxoglutarate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

octanoate

(2E,6E)-farnesoate

propanoate

acetate

formate

butanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

3-(carbamoylamino)-2-methylpropanoate

chorismate

3-methyl-cis,cis-muconate

fumarate

succinate

(S)-malate

D-glucarate

cis-aconitate

D-threo-isocitrate

fluoroacetate

(R)-pantoate

aldehydo-D-glucuronate

phytenate

leukotriene-E4

leukotriene-D4

nicotinamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

3,5-dichloro-2-methyl-muconate

3-chloro-cis,cis-muconate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

androsterone

pregnenolone

campest-4-en-3-one

testosterone

progesterone

(indol-3-yl)acetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

17-α-hydroxypregnenolone

3-β-hydroxyandrost-5-en-17-one

cholest-5-en-3-one

cholesterol

cholate

glycocholate

isocholate

3-dehydrocholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phytate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

propan-1-ol

phytol

ethanol

butan-1-ol

methanol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

agmatine

spermidine

putrescine

spermine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

taurine

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

(R)-S-lactoylglutathione

Fe³⁺

ammonium

K⁺

H⁺

Na⁺

Ca²⁺

Hg²⁺

Mo²⁺

Fe²⁺

Ni²⁺

Cu²⁺

Co²⁺

Zn²⁺

Mg²⁺

trimethyl sulfonium

selenide

selenate

nitrite

nitrate

molybdate

hydrogensulfite

selenite

sulfate

sulfite

thiosulfate

hydrogencarbonate

chloride

phosphonate

phosphate

triphosphate

diphosphate

thiamine

L-ascorbate

nicotinate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

pyridoxine

(R)-NADHX

(S)-NADHX

coenzyme A

(R)-lipoate

3-cyano-L-alanine

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

2-iminosuccinate

2-iminobutanoate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

(R)-2-hydroxy-4-methylpentanoate

4-methylpentanoyl-CoA

(R)-2-hydroxy-4-methylpentanoyl-CoA

4-methylpentanoate