ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1010

ammonia

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C4690

selenodiglutathione

C4688

glutathioselenol

C12492

1,6-anhydro-N-acetyl-β-muramate

C11868

N2-succinyl-L-ornithine

C14075

N2-succinyl-L-arginine

C15181

(S)-5-amino-3-oxohexanoate

C623

(3S,5S)-3,5-diaminohexanoate

C4674

glutathione disulfide

C12392

D-glycero-β-D-manno-heptose 1,7-bisphosphate

C12393

D-glycero-β-D-manno-heptose 1-phosphate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C6361

acetoacetate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C12848

N5-carboxyaminoimidazole ribonucleotide

C11711

(R)-1-amino-2-propanol O-2-phosphate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C12352

(S)-dihydroorotate

C191

L-selenocystathionine

C1098

acrylamide

C1096

acrylate

C1303

4-guanidinobutyramide

C13919

4-guanidinobutanoate

C8366

(indol-3-yl)acetamide

C11756

propionamide

C14177

propane-1,3-diamine

C863

carboxyspermidine

C13257

carboxynorspermidine

C11849

norspermidine

C13635

β-D-ribosylnicotinate

C13728

7,8-didemethyl-8-hydroxy-5-deazariboflavin

C8938

oxalate

C1538

2-C-methyl-D-erythritol 4-phosphate

C8323

tryptamine

C12364

isopentenyl diphosphate

C3338

2-oxoglutaramate

C13681

5-carboxymethyl-2-hydroxymuconate

C370

(S)-mandelate

C382

(R)-mandelate

C891

citrate

C7349

chloramphenicol

C352

2-iminoacetate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C14074

prenyl diphosphate

C11794

3'-phosphoadenylyl-sulfate

C15056

salicyl alcohol

C2580

methylsalicylate

C1325

4-amino-4-deoxychorismate

C12213

2-aminomalonate semialdehyde

C6597

3-ureidopropanoate

C1186

5-oxo-L-proline

C15215

(L-threonylcarbamoyl)adenylate

C8333

(indol-3-yl)pyruvate

C12078

itaconate

C3850

5-amino-6-(D-ribitylamino)uracil

C13627

DNA without lesion

C13950

pimeloyl-CoA

C1440

nigerose

C12031

S-Inosyl-L-homocysteine

C14218

L-β-lysine

C11654

selenophosphate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C1108

acetyl phosphate

C11754

propanoyl phosphate

C912

chloroacetaldehyde

C11836

hydroxypyruvate

C11826

oxalosuccinate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C285

coenzyme B

C283

CoB-CoM heterodisulfide

C13751

methanophenazine

C12331

dihydromethanophenazine

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C12102

isobutanol

C13800

3-methylbutanol

C13801

3-methylbutanal

C13799

2-methylbutanol

C11976

2-methylbutanal

C13798

2-phenylethanol

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C12162

hydrogen peroxide

C855

coenzyme F390-A

C6444

oxaloacetate

C1353

3-phosphooxypyruvate

C12390

D-erythro-imidazole-glycerol-phosphate

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C12274

enol-phenylpyruvate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C446

5-hydroxyindole thiazolidine carboxylate

C1268

(R)-4'-phosphopantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C1184

5-phospho-β-D-ribosylamine

C12254

ethanolamine

C13909

CDP-glycerol

C12208

poly (glycerol phosphate)

C13970

β-D-fructose 2,6-bisphosphate

C873

coproporphyrinogen III

C7865

urea

C12178

histidinal

C3656

D-gluconate 6-phosphate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C12176

histidinol

C11800

(R)-pantothenate

C1528

2-dehydropantoate

C12218

α-D-glucosamine 1-phosphate

C11539

xanthine

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C3482

dihydroxyacetone

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C11802

4'-phosphopantetheine

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11715

quinolinate

C1445

adenosine 3',5'-bisphosphate

C9422

nicotinate adenine dinucleotide

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C949

lipid X

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C1631

3-amino-1-hydroxyacetone 1-phosphate

C10349

glycerone phosphate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C11493

2-phosphoglycolate

C11483

glycolate

C933

L-canavanine

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C10794

lipid A disaccharide (E. coli)

C6099

lipid IVA

C11767

porphobilinogen

C12139

preuroporphyrinogen

C1130

8-amino-7-oxononanoate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C12350

7,8-diaminopelargonate

C12355

dethiobiotin

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C12048

γ-L-glutamyl 5-phosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C2191

carbamoyl phosphate

C12192

carbonic acid

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11832

orotidine 5'-phosphate

C927

carbon monoxide

C1102

O-acetyl-L-serine

C13854

hydrogen selenide

C939

butanoyl phosphate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C12214

(S)-4-amino-5-oxopentanoate

C1231

5-aminolevulinate

C3262

3-methyl-2-oxobutanoate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C1530

(2R,3S)-3-isopropylmalate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C10260

ADP-D-glycero-β-D-manno-heptose

C10261

ADP-L-glycero-β-D-manno-heptose

C12394

6-phospho D-glucono-1,5-lactone

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C11479

phosphoenolpyruvate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11760

prephenate

C928

CO2

C11723

L-quinate

C12369

3-dehydroquinate

C11653

shikimate

C1431

3-dehydroshikimate

C11606

thiamine phosphate

C11604

thiamine diphosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C11543

H2O

C12164

H2

C12315

5,6-dimethylbenzimidazole

C11857

β-nicotinate D-ribonucleotide

C1036

α-ribazole 5'-phosphate

C6829

salicylaldehyde

C2860

fluoroacetaldehyde

C2858

glycolaldehyde

C9494

D-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2063

β-D-ribopyranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3485

butan-1-al

C3483

formaldehyde

C3523

1-propanal

C3494

isobutanal

C3529

1-octanal

C3500

acetaldehyde

C6246

(S)-lactaldehyde

C14804

phytenal

C3649

benzaldehyde

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C6090

methylglyoxal

C2040

diacetyl

C10143

menadione

C3449

butan-1-ol

C3448

methanol

C3450

ethanol

C3447

propan-1-ol

C14807

phytol

C3731

glycerol

C11421

protocatechuate

C12235

L-dopa

C2756

dopamine

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C10527

myo-inositol

C10522

scyllo-inosose

C10526

1-amino-1-deoxy-scyllo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10226

α-Kdo-(2→6)-lipid IVA

C5422

6-O-α-mycolyl-trehalose 6-phosphate

C5434

α, α'-trehalose 6-α-mycolate

C5436

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

C5429

trehalose-cis-methoxy-mono-mycolate

C5431

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

C5439

trehalose-trans-methoxy-mono-mycolate

C5425

6-O-cis-keto-mycolyl-trehalose 6-phosphate

C5435

trehalose-cis-keto-mono-mycolate

C5437

6-O-trans-keto-mycolyl-trehalose 6-phosphate

C5430

trehalose-trans-keto-mono-mycolate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C10874

apo-4'-lycopenal

C5001

apo-4'-lycopenoate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9077

(2E,6E)-farnesyl diphosphate

C11012

phytyl diphosphate

C3727

all-trans-retinyl palmitate

C10966

all-trans-retinol

C4545

3-nonaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C7060

3-hexaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C15301

all-trans-nonaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C9574

betalamate

C9685

miraxanthin V

C666

ferric-enterobactin complex

C668

iron(III) dicitrate

C4086

1-(β-D ribofuranosyl)nicotinamide

C2012

keto-D-fructose

C8835

β-D-fructofuranose

C2143

D-xylulose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C4960

N-acetyl-β-neuraminate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C11625

1-O-acetyl-α-maltose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10372

a peptidoglycan dimer (S. aureus)

C10381

a peptidoglycan dimer (mycobacteria)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C6583

α,α-trehalose 6-phosphate

C6744

CMP-N-acetyl-β-neuraminate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C7780

UDP-α-D-glucose

C1015

GDP-α-D-glucose

C8422

CDP-α-D-glucose

C10263

ADP-α-D-glucose

C1939

dTDP-α-D-glucose

C7804

UDP-α-D-galactofuranose

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7722

UDP-α-D-glucuronate

C7790

UDP-N-acetyl-α-D-mannosamine

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C8666

UDP-α-D-galactose

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5640

UDP-N-acetyl-α-D-galactosamine

C7444

UDP-N-acetyl-α-D-glucosamine

C7720

UDP-α-D-xylose

C1930

dTDP-β-L-rhamnose

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8433

CDP-4-dehydro-6-deoxy-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1009

GDP-α-D-mannose

C1043

GDP-4-dehydro-α-D-rhamnose

C7189

GDP-β-L-fucose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2116

β-D-galactose 6-phosphate

C2115

α-D-galactose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C2057

α-D-ribose-1-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8815

α-D-galactose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C6823

α,α-trehalose

C11485

D-gluconate

C7743

dAMP

C7840

dGMP

C7834

dIMP

C7753

XTP

C7817

IDP

C7759

ITP

C7747

dIDP

C7749

dITP

C10266

ppGpp

C10267

pppGpp

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7841

adenosine 2',3'-cyclic monophosphate

C7641

adenosine 3'-monophosphate

C7645

guanosine 2',3'-cyclic monophosphate

C7653

guanosine 3'-monophosphate

C7807

dGDP

C7823

dADP

C7811

XMP

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7643

cyclic-GMP

C7652

cyclic-AMP

C7741

IMP

C7785

hypoxanthine

C5552

5'-deoxyadenosine

C7827

GMP

C10288

adenylo-succinate

C7751

dGTP

C7783

dATP

C7745

GTP

C7795

GDP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7809

AMP

C7844

ATP

C7757

ADP

C4012

5,6-dihydrouracil

C7801

5,6-dihydrothymine

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C7306

5'-deoxy-5'-fluoroadenosine

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C6460

cytidine-3'-monophosphate

C6462

uridine 3'-monophosphate

C8755

dCMP

C8770

dUMP

C8744

dTMP

C2241

UMP

C2245

CMP

C8764

dTTP

C8724

dUTP

C8772

dCTP

C8733

dCDP

C8752

dUDP

C8720

dTDP

C8732

CDP

C8714

UDP

C8760

UTP

C8761

CTP

C4243

β-nicotinamide D-ribonucleotide

C4240

reduced β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C8750

cytidine 2',3'-cyclic monophosphate

C8747

uridine 2'3'-cyclic monophosphate

C1817

cyclic di-3',5'-guanylate

C9540

preQ1

C10601

thymine

C8739

uracil

C9454

adenine

C9455

guanine

C11520

hypoglycin B

C3536

L-α-amino-ε-keto-pimelate

C12303

L-citrulline

C5583

L-methionine

C5573

L-tyrosine

C5605

L-histidine

C12067

glycine

C5603

L-isoleucine

C5581

L-proline

C5588

L-leucine

C5642

L-arginine

C2469

L-phenylalanine

C5577

L-threonine

C5584

L-lysine

C5571

L-valine

C5597

L-alanine

C5579

L-serine

C5575

L-tryptophan

C5596

L-aspartate

C5609

L-glutamine

C5607

L-glutamate

C5643

L-asparagine

C5612

L-cysteine

C12227

O-succinyl-L-homoserine

C12261

hypoglycin A

C12245

L-homoserine

C12241

L-4-hydroxyglutamate semialdehyde

C12229

O-phospho-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12239

L-aspartate 4-semialdehyde

C12231

L-ornithine

C2426

S-sulfo-L-cysteine

C12247

L-homocysteine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5595

L-cystathionine

C5630

Nω-hydroxy-L-arginine

C5580

L,L-diaminopimelate

C12073

L-aspartyl-4-phosphate

C15000

N-acetyl-L-ornithine

C13322

N-carbamoyl-L-aspartate

C11435

(R)-β-lysine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C8797

D-glutamate

C8798

D-cysteine

C8799

D-alanine

C12165

2-hydroxy-5-oxoproline

C12063

seleno-L-homocysteine

C12061

L-selenomethionine

C3402

3-phospho-L-serine

C13320

N-carbamoylglycine

C14973

N-acetyl-L-glutamate

C10820

5-hydroxy-L-tryptophan

C6599

2-iminobutanoate

C6708

2-iminopropanoate

C6596

2-iminosuccinate

C6309

(S)-4-hydroxymandelate

C6311

(R)-4-hydroxymandelate

C6043

4-methylphenol

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1328

L-cysteinylglycine

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1434

D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C10799

DNA with lesion

C11480

phenylacetate

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9817

3,8-divinyl protochlorophyllide a

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9850

chlorophyllide a

C9836

protochlorophyllide a

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9800

adenosylcobyrate

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9869

cob(I)inamide

C9865

Mg-protoporphyrin

C9807

adenosylcobinamide

C9855

adenosyl-cobinamide phosphate

C6624

protoheme

C13422

hydrogen cyanide

C7658

uroporphyrinogen-III

C7662

uroporphyrinogen-I

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7632

siroheme

C7121

oxygen

C7118

hydrogen sulfide

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C11476

(R)-glycerate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6287

2-octaprenylphenol

C8958

superoxide

C8962

nitric oxide

C13088

chloramphenicol 3-acetate

C12980

4-nitrophenyl phosphate

C12862

4-nitrophenol

C4734

dimethyl sulfide

C4606

S-(hydroxymethyl)glutathione

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C3978

thiocyanate

C4678

glutathione

C4644

S-sulfanylglutathione

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12629

coenzyme M

C12587

L-cysteate

C12637

3-sulfopyruvate

C7864

Fe3+

C4320

H+

C4328

ammonium

C11007

Ni2+

C11023

Fe2+

C11006

Co2+

C11011

Cu2+

C11009

Mg2+

C1689

trimethyl sulfonium

C7017

selenite

C7022

selenide

C7016

sulfite

C7052

trithionate

C7025

OH-

C7034

hydrogensulfite

C7020

selenate

C7030

nitrate

C7028

nitrite

C7036

hydrogencarbonate

C7024

thiosulfate

C7057

molybdate

C7014

sulfate

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C10301

agmatine

C3548

putrescine

C3574

spermidine

C8775

2-phenylethylamine

C13166

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C13157

serotonin

C11222

sn-glycero-3-phosphoethanolamine

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C11509

fluoroacetate

C7869

acetamide

C8033

5-amino-4-imidazolecarboxyamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C10996

nicotinamide

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C2242

(S)-3-aminobutanoyl-CoA

C4922

isobutanoyl-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C4927

(E)-glutaconyl-CoA

C4981

CoA-disulfide

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C4901

succinyl-CoA

C5282

itaconyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5014

phenylacetyl-CoA

C4937

3'-dephospho-CoA

C4913

malonyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5298

acetyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C7343

(S)-malyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C2008

acetoacetyl-CoA

C2598

D-glucono-1,5-lactone

C10049

FMNH2

C10053

FAD

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C5563

ubiquinol-10

C5535

ubiquinol-7

C5551

ubiquinol-9

C5543

ubiquinol-8

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C1866

3-demethylubiquinol-10

C1865

3-demethylubiquinol-7

C1868

3-demethylubiquinol-9

C1867

3-demethylubiquinol-8

C10614

coenzyme A

C2239

oxidized coenzyme F420-2

C6007

MoO2-molybdopterin cofactor

C6003

guanylyl molybdenum cofactor

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10988

riboflavin

C10982

nicotinate

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4216

pyridoxamine

C4188

pyridoxamine 5'-phosphate

C4985

(S)-1-pyrroline-5-carboxylate

C2317

precorrin-6B

C2323

precorrin-7

C2297

precorrin-8x

C2305

precorrin-1

C2311

precorrin-2

C2302

precorrin-3A

C2314

precorrin-3B

C2320

precorrin-4

C2300

precorrin-5

C1705

sirohydrochlorin

C2001

hydantoin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12674

7,8-dihydroneopterin 2',3'-cyclic phosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C10609

7,8-dihydropteroate

C11481

orotate

C13366

(indole-3-yl)acetonitrile

C13382

acrylonitrile

C13354

preQ0

C3093

urate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6934

4-hydroxybenzoate

C6868

futalosine

C6973

dehypoxanthine futalosine

C7139

4-tyrosol

C8490

3-methoxy-4-hydroxyphenylglycol

C8335

(indol-3-yl)acetaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C11429

salicylate

C8968

benzoate

C8974

4-aminobenzoate

C8950

chorismate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8536

3-carboxy-cis,cis-muconate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6186

(S)-lactate

C6185

(R)-lactate

C3420

propanoate

C11517

acetate

C3308

pyruvate

C3421

formate

C3418

butanoate

C3412

decanoate

C3409

octanoate

C6371

3-oxoadipate

C13266

(15Z)-tetracosenoate

C13210

oleate

C6379

linoleate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13260

phytenate

C2774

pristanate

C3383

palmitate

C11482

(R)-pantoate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3257

2-oxobutanoate