an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-phosphooxypyruvate

pimeloyl-CoA

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

β-nicotinate D-ribonucleotide

quinolinate

L-quinate

3-dehydroquinate

shikimate

3-dehydroshikimate

N-acetylglutamyl-phosphate

(2S)-2-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

3-ethylmalate

2-oxovalerate

α-D-glucosamine 1-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

thiamine phosphate

O-acetyl-L-serine

hydrogen selenide

nicotinate adenine dinucleotide

2-(α-hydroxyethyl)thiamine diphosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

orotidine 5'-phosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

α-ribazole 5'-phosphate

α-ribazole

anthranilate

phosphoenolpyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-phosphoglycolate

glycolate

coproporphyrinogen III

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

hydrogen peroxide

carbon monoxide

thiamine diphosphate

5-enolpyruvoyl-shikimate 3-phosphate

L-histidinol phosphate

histidinol

urea

H₂

carbonic acid

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

CO₂

H₂O

N-acetyl-D-muramate 6-phosphate

glycerone phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

CDP-glycerol

selenodiglutathione

glutathioselenol

2-amino-3-carboxymuconate-6-semialdehyde

N⁵-carboxyaminoimidazole ribonucleotide

4-(γ-L-glutamylamino)butanal

4-(γ-L-glutamylamino)butanoate

4-aminobutanoate

glutathione disulfide

bisorganyltrisulfane

enol-phenylpyruvate

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

1-piperideine 6-carboxylate

4-amino-2-methyl-5-pyrimidinemethanol

1,6-anhydro-N-acetyl-β-muramate

(S)-2-amino-6-oxohexanoate

1,4-dihydroxy-2-naphthoate

N-acetyl-L,L-2,6-diaminopimelate

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

dialurate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-iminoacetate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

hydroxylamine

(R)-1-amino-2-propanol O-2-phosphate

DNA without lesion

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3'-phosphoadenylyl-sulfate

1-deoxy-L-glycero-tetrulose 4-phosphate

propanoyl phosphate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

methylamine

acetoacetate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-isopropylmaleate

nigerose

3-ureidopropanoate

(L-threonylcarbamoyl)adenylate

4-amino-4-deoxychorismate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

hydroxypyruvate

dethiobiotin

methylsalicylate

salicyl alcohol

2-dehydropantoate

(R)-pantothenate

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

(R)-2,3-dihydroxy-3-methylpentanoate

5-oxo-L-proline

5,6-dimethylbenzimidazole

mesaconate

cyclohex-1,5-diene-1-carbonyl-CoA

butanoyl phosphate

acetyl phosphate

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-Inosyl-L-homocysteine

N-acetyl-L-glutamate 5-semialdehyde

carbamoyl phosphate

(S)-dihydroorotate

γ-glutamyl-L-putrescine

(S)-2,3,4,5-tetrahydrodipicolinate

2-C-methyl-D-erythritol 4-phosphate

L-β-lysine

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

selenophosphate

S-adenosyl 3-(methylsulfanyl)propylamine

1,3-propanediol

3-hydroxypropanal

N-(5-phosphoribosyl)-anthranilate

citraconate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

histidinal

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

γ-L-glutamyl 5-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prephenate

N-carbamoylputrescine

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate 3-phosphate

ammonia

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

isopentenyl diphosphate

prenyl diphosphate

(S)-ureidoglycolate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

α-D-galactosyl-diphosphoundecaprenol

oxaloacetate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

L-homocysteine

4-methylphenol

DNA with lesion

phenylacetate

ethylphosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

cob(I)inamide

adenosylcobinamide

adenosylcobalamin 5'-phosphate

adenosylcobalamin

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosylcobyrate

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cobalt-precorrin-3

cobalt-factor III

cobalt-precorrin-2

cobalt-sirohydrochlorin

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

N₂

protoporphyrinogen IX

uroporphyrinogen-I

protoporphyrin IX

uroporphyrinogen-III

siroheme

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

1-oleoyl-2-lyso-glycerone phosphate

(S)-citramalate

(R)-citramalate

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

(R)-2-hydroxyglutarate

superoxide

hydroxyl radical

4-nitrophenyl phosphate

4-nitrophenol

dimethyl sulfide

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

coenzyme M

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

Fe³⁺

Cu²⁺

Mg²⁺

Fe²⁺

Co²⁺

Ni²⁺

Ca²⁺

Cd²⁺

H⁺

ammonium

trimethyl sulfonium

thiosulfate

molybdate

hydrogencarbonate

trithionate

OH^-

hydrogensulfite

nitrate

nitrite

selenite

selenide

sulfate

sulfite

selenate

phosphonate

phosphate

triphosphate

diphosphate

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

putrescine

spermidine

acetamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

acetyl-CoA

malonyl-CoA

(S)-3-aminobutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

benzoyl-CoA

3'-dephospho-CoA

linoleoyl-CoA

α-linolenoyl-CoA

succinyl-CoA

isobutanoyl-CoA

CoA-disulfide

phenylacetyl-CoA

crotonyl-CoA

phytenoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

all-trans-retinyl palmitate

D-glucono-1,5-lactone

FAD

FMN

FMNH₂

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

riboflavin

thiamine

nicotinate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-4

precorrin-5

precorrin-6B

precorrin-6A

precorrin-7

precorrin-8x

precorrin-3B

precorrin-1

precorrin-2

sirohydrochlorin

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

guanosine

adenosine

hypoxanthine

dAMP

dGMP

dGTP

dATP

dITP

dGDP

dADP

dIDP

GDP

ADP

IDP

XMP

IMP

GMP

AMP

GTP

ATP

ITP

orotate

uracil

UDP

CDP

dCTP

CTP

dUTP

dUMP

UTP

dTTP

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

cytidine 2',3'-cyclic monophosphate

cytidine-3'-monophosphate

dCMP

5,6-dihydrouracil

5,6-dihydrothymine

dTMP

dUDP

dTDP

dCDP

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

isoguanine

preQ₁

preQ₀

(indole-3-yl)acetonitrile

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

protocatechuate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

salicylate

4-aminobenzoate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

chorismate

fumarate

L-aspartate

succinate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

(2R)-homocitrate

cis-homoaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(S)-lactate

(R)-lactate

acetate

formate

pyruvate

propanoate

butanoate

decanoate

octanoate

3-oxoadipate

leukotriene-D4

leukotriene-E4

(15Z)-tetracosenoate

oleate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

palmitate

pristanate

D-gluconate

(R)-pantoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

L-α-amino-ε-keto-pimelate

L-serine

D-serine

β-alanine

(R)-3-amino-2-methylpropanoate

L-glutamine

L-leucine

L-proline

L-alanine

glycine

L-glutamate

D-glutamate

L-lysine

L-histidine

L-arginine

L-asparagine

L-threonine

L-tyrosine

L-cysteine

L-tryptophan

L-phenylalanine

D-aspartate

D-alanine

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

(2S, 3S)-3-methylaspartate

N-carbamoylglycine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

L-citrulline

L-valine

L-isoleucine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-phospho-L-homoserine

L-homoserine

L-ornithine

L-glutamate-5-semialdehyde

meso-diaminopimelate

L-selenocysteine

L-methionine

L,L-diaminopimelate

methylglyoxal

diacetyl

glycolaldehyde

acetaldehyde

butan-1-al

formaldehyde

isobutanal

1-propanal

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

methanol

propan-1-ol

ethanol

phytol

glycerol

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

dioleoyl phosphatidate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

keto-D-fructose

β-D-fructofuranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

adenylo-succinate

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

2-hydroxy-dATP

5-hydroxy-CTP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate