ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C435

bisorganyltrisulfane

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C12054

L-dehydro-ascorbate

C14152

pyruvic oxime

C13702

1-piperideine 6-carboxylate

C13983

α-D-galacturonate 1-phosphate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C13909

CDP-glycerol

C4690

selenodiglutathione

C4688

glutathioselenol

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C6574

(S)-ureidoglycolate

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C13912

3,5-dihydro-4H-imidazol-4-one

C13967

4-aminoimidazole

C1323

5-aminoimidazole-4-carboxylate

C6618

5-ureidoimidazole-4-carboxylate

C14495

3-hydroxy-5- oxohexanoyl-CoA

C14754

3-hydroxy-5-oxohexanoate

C15072

dihydrophloroglucinol

C14907

gallate

C352

2-iminoacetate

C4674

glutathione disulfide

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C12394

6-phospho D-glucono-1,5-lactone

C15156

dialurate

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C3376

(S)-4-hydroxy-2-oxohexanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C13854

hydrogen selenide

C12492

1,6-anhydro-N-acetyl-β-muramate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C15181

(S)-5-amino-3-oxohexanoate

C623

(3S,5S)-3,5-diaminohexanoate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C15283

poly(ribitol phosphate)

C13813

O-D-alanyl-poly(ribitol phosphate)

C853

(5S)-5-benzyl-hydantoin

C851

(5R)-5-benzyl-hydantoin

C12096

isochorismate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C11838

2-succinylbenzoate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C370

(S)-mandelate

C382

(R)-mandelate

C15056

salicyl alcohol

C2580

methylsalicylate

C7865

urea

C933

L-canavanine

C9422

nicotinate adenine dinucleotide

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C1196

S-methyl-5'-thioadenosine

C1102

O-acetyl-L-serine

C3269

(S)-4-hydroxy-2-oxopentanoate

C3656

D-gluconate 6-phosphate

C13257

carboxynorspermidine

C11849

norspermidine

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C1305

4-fumaryl-acetoacetate

C6361

acetoacetate

C12409

creatinine

C12078

itaconate

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C1186

5-oxo-L-proline

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C12016

(lipoyl)adenylate

C1038

α-ribazole

C14074

prenyl diphosphate

C13192

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

C11539

xanthine

C1555

(S)-2,3-dihydrodipicolinate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C8401

serotonin O-sulfate

C8399

5-hydroxytryptophol

C8398

5-hydroxytryptophol sulfate

C8397

6-hydroxymelatonin

C8396

6-sulfatoxymelatonin

C8395

N-acetyl-serotonin sulfate

C13717

dopamine 3-O-sulfate

C11604

thiamine diphosphate

C1078

(S)-2-amino-6-oxohexanoate

C12230

formamide

C12325

1,4-dihydroxy-2-naphthoate

C5991

3-keto-β-D-galactose

C12044

L-histidinol phosphate

C1325

4-amino-4-deoxychorismate

C1440

nigerose

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C965

benzoylsuccinyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C12146

hydroxylamine

C12288

(E)-2-benzylidenesuccinyl-CoA

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C15306

2,3-didehydroadipyl-CoA

C1108

acetyl phosphate

C12296

dimethyl sulfoxide

C13627

DNA without lesion

C15215

(L-threonylcarbamoyl)adenylate

C912

chloroacetaldehyde

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C11800

(R)-pantothenate

C11715

quinolinate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C4883

2-oleoylglycerol

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11743

pyrogallol

C1580

1,2,3,5-tetrahydroxybenzene

C15155

phloroglucinol

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C12218

α-D-glucosamine 1-phosphate

C13996

3''-adenylylstreptomycin

C11836

hydroxypyruvate

C11634

tartronate semialdehyde

C13723

arsenite

C14218

L-β-lysine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C12178

histidinal

C12176

histidinol

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C11826

oxalosuccinate

C285

coenzyme B

C13751

methanophenazine

C283

CoB-CoM heterodisulfide

C12331

dihydromethanophenazine

C6597

3-ureidopropanoate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C7349

chloramphenicol

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C12048

γ-L-glutamyl 5-phosphate

C11606

thiamine phosphate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C12162

hydrogen peroxide

C12192

carbonic acid

C12215

(E)-glutaconate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C3850

5-amino-6-(D-ribitylamino)uracil

C11483

glycolate

C13635

β-D-ribosylnicotinate

C12274

enol-phenylpyruvate

C13681

5-carboxymethyl-2-hydroxymuconate

C1528

2-dehydropantoate

C12315

5,6-dimethylbenzimidazole

C11857

β-nicotinate D-ribonucleotide

C1036

α-ribazole 5'-phosphate

C1231

5-aminolevulinate

C11767

porphobilinogen

C12139

preuroporphyrinogen

C12214

(S)-4-amino-5-oxopentanoate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C11760

prephenate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C12369

3-dehydroquinate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11653

shikimate

C1431

3-dehydroshikimate

C939

butanoyl phosphate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C1538

2-C-methyl-D-erythritol 4-phosphate

C12364

isopentenyl diphosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C927

carbon monoxide

C11802

4'-phosphopantetheine

C1268

(R)-4'-phosphopantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11832

orotidine 5'-phosphate

C12352

(S)-dihydroorotate

C2191

carbamoyl phosphate

C1445

adenosine 3',5'-bisphosphate

C11794

3'-phosphoadenylyl-sulfate

C891

citrate

C1010

ammonia

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C873

coproporphyrinogen III

C928

CO2

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C11988

mesaconate

C6444

oxaloacetate

C3344

2-dehydro-3-deoxy-D-gluconate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C3338

2-oxoglutaramate

C2325

α-D-galactosyl-diphosphoundecaprenol

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C1353

3-phosphooxypyruvate

C11654

selenophosphate

C12164

H2

C11756

propionamide

C8366

(indol-3-yl)acetamide

C1098

acrylamide

C1096

acrylate

C1303

4-guanidinobutyramide

C13919

4-guanidinobutanoate

C11479

phosphoenolpyruvate

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C1112

ManNAc-GlcNAc-PP-undecaprenol

C10349

glycerone phosphate

C12254

ethanolamine

C11543

H2O

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C6309

(S)-4-hydroxymandelate

C6311

(R)-4-hydroxymandelate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C8543

cyanophycin primer-L-aspartate

C8539

cyanophycin primer

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C10799

DNA with lesion

C11480

phenylacetate

C803

ethylphosphate

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9817

3,8-divinyl protochlorophyllide a

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9850

chlorophyllide a

C9836

protochlorophyllide a

C9821

cobalt-factor III

C9845

cobalt-sirohydrochlorin

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9871

cobalt-precorrin-5A

C9822

cobalt-precorrin-3

C9847

cobalt-precorrin-4

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9800

adenosylcobyrate

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9865

Mg-protoporphyrin

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9807

adenosylcobinamide

C9855

adenosyl-cobinamide phosphate

C6624

protoheme

C7116

nitrous oxide

C13422

hydrogen cyanide

C2255

N2

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7666

protoporphyrinogen IX

C7632

siroheme

C7118

hydrogen sulfide

C7121

oxygen

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C6427

2,3-diphospho-D-glycerate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6757

(S)-citramalate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C8186

(R)-2-hydroxyglutarate

C8959

monodehydroascorbate radical

C8962

nitric oxide

C8958

superoxide

C13088

chloramphenicol 3-acetate

C4606

S-(hydroxymethyl)glutathione

C4740

S-methyl-L-methionine

C4734

dimethyl sulfide

C3978

thiocyanate

C3998

methanethiol

C4678

glutathione

C4644

S-sulfanylglutathione

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C12623

sulfoacetaldehyde

C12629

coenzyme M

C4326

Na+

C4320

H+

C4328

ammonium

C11006

Co2+

C11023

Fe2+

C11009

Mg2+

C11019

Ca2+

C7017

selenite

C7024

thiosulfate

C7052

trithionate

C7025

OH-

C7034

hydrogensulfite

C7030

nitrate

C7036

hydrogencarbonate

C7016

sulfite

C7028

nitrite

C7020

selenate

C7022

selenide

C7014

sulfate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C1689

trimethyl sulfonium

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C10301

agmatine

C3548

putrescine

C3574

spermidine

C8325

N-acetyl-serotonin

C13157

serotonin

C7315

thyroxine sulfate

C12564

3,5,3'-triiodo-L-thyronine

C7338

triiodothyronine sulfate

C7050

L-thyroxine

C2860

fluoroacetaldehyde

C11509

fluoroacetate

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C7685

allantoate

C7869

acetamide

C9539

(S)-(+)-allantoin

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C4520

(25S)-3-oxocholest-4-en-26-oate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10542

androst-4-ene-3,17-dione

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C5313

2-methylbutanoyl-CoA

C4922

isobutanoyl-CoA

C5014

phenylacetyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5282

itaconyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5102

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5092

(3R)-hydroxy-5-trans-dodecenoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C4911

methylacrylyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C4937

3'-dephospho-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C4927

(E)-glutaconyl-CoA

C5314

2-methylacetoacetyl-CoA

C4913

malonyl-CoA

C5304

(3S)-citryl-CoA

C4901

succinyl-CoA

C5298

acetyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C6146

(2E)-octadec-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C2744

(S)-3-hydroxyhexadecanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C6562

hexadecanedioyl-CoA

C10758

3-oxoadipyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6198

3-oxodecanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C3727

all-trans-retinyl palmitate

C10076

L-galactono-1,4-lactone

C2598

D-glucono-1,5-lactone

C10569

tributyrin

C10393

1-oleoyl-sn-glycerol

C10554

1,2-dibutyrin

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C5543

ubiquinol-8

C1672

menaquinol-7

C1680

menaquinol-8

C1860

demethylmenaquinol-7

C1863

demethylmenaquinol-8

C1867

3-demethylubiquinol-8

C10612

tetrahydrosarcinapterin

C10617

5-methyl-tetrahydrosarcinapterin

C10611

(R)-lipoate

C10615

methyl-CoM

C10614

coenzyme A

C14615

N5-methyltetrahydromethanopterin

C14603

tetrahydromethanopterin

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10994

thiamine

C10986

L-ascorbate

C10988

riboflavin

C10982

nicotinate

C4214

pyridoxine 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10143

menadione

C10966

all-trans-retinol

C4985

(S)-1-pyrroline-5-carboxylate

C2323

precorrin-7

C2302

precorrin-3A

C2314

precorrin-3B

C2317

precorrin-6B

C2308

precorrin-6A

C2297

precorrin-8x

C2305

precorrin-1

C2311

precorrin-2

C2320

precorrin-4

C2300

precorrin-5

C1705

sirohydrochlorin

C2001

hydantoin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C9454

adenine

C9455

guanine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C15085

guanosine

C15094

xanthosine

C15088

adenosine

C15091

inosine

C2226

purine

C7785

hypoxanthine

C7743

dAMP

C7840

dGMP

C7834

dIMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7807

dGDP

C7823

dADP

C7817

IDP

C7757

ADP

C7795

GDP

C7811

XMP

C7827

GMP

C7809

AMP

C7741

IMP

C7753

XTP

C7759

ITP

C7844

ATP

C7745

GTP

C8741

dipicolinate

C8752

dUDP

C8720

dTDP

C8764

dTTP

C8772

dCTP

C8744

dTMP

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C8755

dCMP

C8733

dCDP

C8732

CDP

C8724

dUTP

C8770

dUMP

C11481

orotate

C8714

UDP

C8739

uracil

C8760

UTP

C8761

CTP

C7764

UDP-α-D-galacturonate

C7804

UDP-α-D-galactofuranose

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7722

UDP-α-D-glucuronate

C7790

UDP-N-acetyl-α-D-mannosamine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1939

dTDP-α-D-glucose

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8422

CDP-α-D-glucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C2519

thymidine

C10601

thymine

C2245

CMP

C2241

UMP

C9540

preQ1

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C6829

salicylaldehyde

C6920

8-hydroxypurine

C7151

6,8-dihydroxypurine

C3093

urate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6934

4-hydroxybenzoate

C3649

benzaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C12836

phenol

C6043

4-methylphenol

C11421

protocatechuate

C2756

dopamine

C11429

salicylate

C8968

benzoate

C8974

4-aminobenzoate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C3316

(3E)-2-oxohex-3-enedioate

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8536

3-carboxy-cis,cis-muconate

C8534

cis-aconitate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C8531

D-threo-isocitrate

C6186

(S)-lactate

C6185

(R)-lactate

C11517

acetate

C3420

propanoate

C3421

formate

C3308

pyruvate

C3418

butanoate

C3412

decanoate

C3409

octanoate

C6371

3-oxoadipate

C6165

leukotriene-E4

C6163

leukotriene-D4

C13266

(15Z)-tetracosenoate

C13210

oleate

C13298

(3E,5Z)-tetradecadienoate

C5001

apo-4'-lycopenoate

C6379

linoleate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13260

phytenate

C3383

palmitate

C11485

D-gluconate

C11482

(R)-pantoate

C2137

D-tagaturonate

C2021

aldehydo-D-galacturonate

C2047

aldehydo-D-glucuronate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3257

2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3536

L-α-amino-ε-keto-pimelate

C8795

D-serine

C5579

L-serine

C11443

creatine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C11433

(S)-3-amino-2-methylpropanoate

C5588

L-leucine

C5581

L-proline

C5609

L-glutamine

C5597

L-alanine

C12067

glycine

C8797

D-glutamate

C5607

L-glutamate

C5584

L-lysine

C5605

L-histidine

C5642

L-arginine

C5573

L-tyrosine

C5577

L-threonine

C5643

L-asparagine

C5612

L-cysteine

C2469

L-phenylalanine

C5575

L-tryptophan

C8805

D-aspartate

C8799

D-alanine

C12065

L-saccharopine

C12073

L-aspartyl-4-phosphate

C3628

sarcosine

C6532

(2S, 3S)-3-methylaspartate

C5553

N-formimino-glycine

C13320

N-carbamoylglycine

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C11955

O-acetyl-L-homoserine

C3402

3-phospho-L-serine

C12303

L-citrulline

C5603

L-isoleucine

C5571

L-valine

C12237

L-canaline

C12233

L-glutamate-5-semialdehyde

C12231

L-ornithine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12261

hypoglycin A

C12203

S-adenosyl-L-homocysteine

C12245

L-homoserine

C12227

O-succinyl-L-homoserine

C12247

L-homocysteine

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C5583

L-methionine

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C6090

methylglyoxal

C2040

diacetyl

C2858

glycolaldehyde

C3523

1-propanal

C3529

1-octanal

C3483

formaldehyde

C3500

acetaldehyde

C6245

(R)-lactaldehyde

C6246

(S)-lactaldehyde

C14804

phytenal

C9494

D-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2108

β-D-galactopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3450

ethanol

C3448

methanol

C3731

glycerol

C10522

scyllo-inosose

C10526

1-amino-1-deoxy-scyllo-inositol

C6488

phytate

C6477

D-myo-inositol (1,2,3,5,6) pentakisphosphate

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C10874

apo-4'-lycopenal

C4553

3-octaprenyl-4-hydroxybenzoate

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10220

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

C3539

streptomycin

C4086

1-(β-D ribofuranosyl)nicotinamide

C3689

XXLG xyloglucan oligosaccharide

C3687

XLXG xyloglucan oligosaccharide

C3685

XLLG xyloglucan oligosaccharide

C3694

XXXG xyloglucan oligosaccharide

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10754

allolactose

C10693

sucrose

C6821

α-lactose

C2012

keto-D-fructose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C6153

β-L-fucopyranose

C6154

α-L-fucopyranose

C8835

β-D-fructofuranose

C7957

L-fuculose

C2143

D-xylulose

C11627

3'-ketolactose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10381

a peptidoglycan dimer (mycobacteria)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3124

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

C3135

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C6551

α-lactose 6'-phosphate

C1015

GDP-α-D-glucose

C10263

ADP-α-D-glucose

C1009

GDP-α-D-mannose

C983

GDP-α-D-mannuronate

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C10323

D-tagatofuranose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2116

β-D-galactose 6-phosphate

C2115

α-D-galactose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8819

L-fuculose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C3675

D-altronate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7652

cyclic-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10267

pppGpp

C10266

ppGpp

C5552

5'-deoxyadenosine

C10288

adenylo-succinate

C4240

reduced β-nicotinamide D-ribonucleotide

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C1817

cyclic di-3',5'-guanylate

C11520

hypoglycin B