an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(lipoyl)adenylate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

quinolinate

3-deoxy-D-manno-octulosonate 8-phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-dehydro-3-deoxy-D-gluconate

N-succinyl-L,L-2,6-diaminopimelate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

1,4-dihydroxy-2-naphthoate

carbon monoxide

4-amino-2-methyl-5-pyrimidinemethanol

hypotaurine

2-iminoacetate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

3'-phosphoadenylyl-sulfate

glutathione disulfide

glutathioselenol

selenodiglutathione

aminoacetone

ammonia

enol-phenylpyruvate

CO₂

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

H₂O

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

coproporphyrinogen III

S-adenosyl 3-(methylsulfanyl)propylamine

selenophosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

(S)-dihydroorotate

orotidine 5'-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

oxaloacetate

glycerone phosphate

H₂

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

phosphoenolpyruvate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

xanthine

arsenite

3-hydroxypropanal

(S)-4-amino-5-oxopentanoate

porphobilinogen

5-aminolevulinate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

oxalate

butanoyl phosphate

urocanate

4-imidazolone-5-propanoate

histidinol

histidinal

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

citrate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

O-acetyl-L-serine

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

urea-1-carboxylate

hydrogen peroxide

(R)-pantothenate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

5-carboxymethyl-2-hydroxymuconate

2-dehydropantoate

3-methyl-2-oxobutanoate

carbamoyl phosphate

3-ureidopropanoate

acetyl phosphate

3-dehydroshikimate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-glycero-2,5-hexodiulosonate

α-D-galactosyl-diphosphoundecaprenol

γ-L-glutamyl 5-phosphate

acetoacetate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

lipid A disaccharide (E. coli)

lipid X

lipid IV_A

(S)-3-methyl-2-oxopentanoate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

hydroxypyruvate

4-pyridoxolactone

1-deoxy-L-glycero-tetrulose 4-phosphate

DNA without lesion

nicotinate adenine dinucleotide

4-amino-4-deoxychorismate

α-D-glucosamine 1-phosphate

(L-threonylcarbamoyl)adenylate

α-ribazole 5'-phosphate

α-ribazole

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

preuroporphyrinogen

formamide

urea

L-canavanine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5,6-dimethylbenzimidazole

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

hydrogen selenide

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

nigerose

prephenate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

dihydrolipoate

5-aminopentanoate

2,5-diaminohexanoate

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

L-histidinol phosphate

S-methyl-5'-thioadenosine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

acetamide

1-oleoyl-2-palmitoyl-phosphatidylglycerol

agmatine

putrescine

spermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

sulfate

selenite

hydrogensulfite

selenide

selenate

hydrogencarbonate

thiosulfate

sulfite

phosphate

diphosphate

triphosphate

Mg²⁺

Fe²⁺

Ni²⁺

Ca²⁺

Co²⁺

ammonium

H⁺

trimethyl sulfonium

dimethyl sulfide

glutathione

2-sulfinoacetaldehyde

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-β-neuraminate 9-phosphate

N-acetyl-D-mannosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

Mg-protoporphyrin

protoporphyrin IX

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoheme

hydrogen cyanide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-precorrin-5A

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-factor III

adenosyl-cobinamide phosphate

cobalt-precorrin-2

cobalt-sirohydrochlorin

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-4

cobalt-precorrin-3

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobyrate

cobyrinate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

phenylacetate

DNA with lesion

4-methylphenol

L-homocysteine

hippurate

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminosuccinate

2-iminobutanoate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

N-carbamoylglycine

N-acetyl-L-aspartate

N-acetyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

(2S, 3S)-3-methylaspartate

3-phospho-L-serine

D-aspartate

D-glutamate

D-alanine

D-serine

D-proline

D-lysine

L-tryptophan

L-histidine

L-tyrosine

L-cysteine

glycine

L-glutamine

L-serine

L-asparagine

L-threonine

L-glutamate

L-aspartate

L-arginine

L-lysine

L-alanine

L-proline

L-leucine

β-alanine

(R)-3-amino-2-methylpropanoate

L-methionine

L-isoleucine

L-valine

L-selenocysteine

L-isoglutamine

L-ornithine

L,L-diaminopimelate

L-cystathionine

L-citrulline

O-phospho-L-homoserine

L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

hypoglycin A

L-canaline

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

meso-diaminopimelate

cyclic-AMP

ITP

dIMP

dITP

XTP

hypoxanthine

ADP

ATP

AMP

XMP

IMP

GMP

5'-deoxyadenosine

GDP

GTP

2'-deoxyinosine

2'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

pppGpp

dADP

dGDP

adenylo-succinate

dGTP

dATP

1-(5-phospho-β-D-ribosyl)-AMP

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

NAD⁺

NADP⁺

NADH

NADPH

5,6-dihydrouracil

5,6-dihydrothymine

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-α-D-glucose

dTDP-viosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

preQ₁

adenine

guanine

uracil

thymine

cyclic di-3',5'-guanylate

dCMP

dTMP

dUMP

dCDP

dTDP

dUDP

dCTP

dUTP

dTTP

CDP

UDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

maltotriose

sucrose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

glycerol

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

salicylaldehyde

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

1,2-dibutyrin

tributyrin

phytate

D-myo-inositol (1,2,3,5,6) pentakisphosphate

protocatechuate

ethanol

methylglyoxal

benzaldehyde

(S)-lactaldehyde

formaldehyde

acetaldehyde

isobutanal

1-octanal

diacetyl

acetone

menadione

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

acetate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

butanoate

octanoate

(3E,5Z)-tetradecadienoate

leukotriene-E4

leukotriene-D4

3-oxoadipate

formate

pyruvate

propanoate

(R)-lactate

(S)-lactate

3-carboxy-cis,cis-muconate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

succinate

fumarate

(S)-malate

(4S)-4-hydroxy-2-oxoglutarate

2-oxoglutarate

2-oxobutanoate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

salicylate

4-aminobenzoate

benzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

urate

menadiol

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

preQ₀

(indole-3-yl)acetonitrile

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FAD

FMN

riboflavin

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

sirohydrochlorin

precorrin-2

precorrin-8x

precorrin-7

precorrin-6B

precorrin-5

precorrin-4

precorrin-1

thiamine

nicotinate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxal

coenzyme A

(R)-lipoate

(R)-NADHX

(S)-NADHX

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

3'-dephospho-CoA

succinyl-CoA

(E)-glutaconyl-CoA

acetyl-CoA

oxalyl-CoA

formyl-CoA

(3S)-citryl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-malyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

(indol-3-yl)acetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

isocholate

3-dehydrocholate

cholate

glycocholate