an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

glutathione disulfide

hydrogen peroxide

autoinducer 2

S-ribosyl-L-homocysteine

O-acetyl-L-serine

hydrogen selenide

CO₂

oxaloacetate

enol-phenylpyruvate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

scopolin

4-hydroxybenzaldehyde

cis-coumarinic acid-β-D-glucoside

4-methylumbelliferyl glucoside

2-dehydropantoate

acetyl phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

4-aminobutanoate

4-(γ-L-glutamylamino)butanoate

glycerone phosphate

phosphoenolpyruvate

methylsalicylate

salicyl alcohol

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

3-dehydroshikimate

3-dehydroquinate

carbamoyl phosphate

isopentenyl diphosphate

coproporphyrinogen III

tartronate semialdehyde

5-dehydro-4-deoxy-D-glucarate

α-D-glucosamine 1-phosphate

propionamide

4-guanidinobutanoate

4-guanidinobutyramide

(indol-3-yl)acetamide

acrylate

acrylamide

3-keto-β-D-galactose

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

prephenate

shikimate 3-phosphate

shikimate

glycolate

2-phosphoglycolate

ethanolamine

2-dehydro-3-deoxy-D-gluconate

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbonic acid

orotidine 5'-phosphate

(S)-dihydroorotate

aminoacetone

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

lipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

xanthine

2,5-didehydro-D-gluconate

2-keto-D-gluconate

L-selenocystathionine

deaminohydroxyblasticidin S

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

S-formylglutathione

(R)-5-phosphomevalonate

(R)-mevalonate

(R)-mevalonate diphosphate

prenyl diphosphate

5-dehydro-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

(R)-4'-phosphopantothenate

(R)-pantothenate

citrate

nicotinate adenine dinucleotide

N6'-acetylkanamycin-B

D-gluconate 6-phosphate

γ-L-glutamyl 5-phosphate

6-phospho D-glucono-1,5-lactone

(lipoyl)adenylate

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

2-oleoylglycerol

2-phenylethanol

3-methylbutanal

3-methylbutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

isobutanol

2-methylbutanal

2-methylbutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

DNA without lesion

N-succinyl-L,L-2,6-diaminopimelate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

pseudouridine 5'-phosphate

S-acetyldihydrolipoamide

dihydroxyacetone

malonate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

phosphocholine

3-phosphooxypyruvate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

(L-threonylcarbamoyl)adenylate

4-amino-4-deoxychorismate

2-C-methyl-D-erythritol 4-phosphate

α-D-galactosyl-diphosphoundecaprenol

1,4-dihydroxy-2-naphthoate

(S)-2-amino-6-oxohexanoate

acetoacetate

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

carbon monoxide

(R)-2,3-dihydroxy-3-methylpentanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

pseudouridine

1,6-anhydro-N-acetyl-β-muramate

quinolinate

2-keto-L-gulonate

L-arginino-succinate

4-amino-2-methyl-5-pyrimidinemethanol

adipate

6-oxohexanoate

6-aminohexanoate

2-iminoacetate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

mercuriphenyl acetate

ammonia

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

L-α-amino-ε-keto-pimelate

L-citrulline

L-methionine

L-lysine

L-aspartate

L-glutamate

L-phenylalanine

L-alanine

glycine

L-asparagine

L-glutamine

L-arginine

L-proline

L-cysteine

L-serine

L-threonine

L-isoleucine

L-valine

L-leucine

L-tyrosine

L-homocysteine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

L-ornithine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-homoserine

meso-diaminopimelate

L-selenocysteine

L-cystathionine

L,L-diaminopimelate

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-selenomethionine

L-saccharopine

N-formimino-glycine

3-phospho-L-serine

D-alanine

D-aspartate

D-glutamate

β-alanine

AMP

ADP

ATP

dGMP

2'-deoxyguanosine

GTP

GDP

dGTP

dGDP

ITP

IDP

dATP

dADP

dITP

dIDP

5'-deoxyadenosine

GMP

IMP

adenylo-succinate

XMP

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyadenosine

pppGpp

ppGpp

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

cyclic-AMP

dAMP

adenine

guanine

purine

uracil

thymine

preQ₁

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dTDP

dUDP

dCDP

dTTP

dUTP

dCTP

dTMP

dUMP

dCMP

β-nicotinamide D-ribonucleotide

UMP

CMP

CDP

UDP

CTP

UTP

NADPH

NADH

NADP⁺

NAD⁺

uridine 3'-monophosphate

cytidine-3'-monophosphate

CDP-choline

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

GDP-α-D-mannose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

xanthosine

guanosine

inosine

adenosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

orotate

(S)-1-pyrroline-5-carboxylate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FMNH₂

reduced riboflavin

FAD

FMN

riboflavin

adenosylcobalamin

cob(I)alamin

scopoletin

coumarin

4-methylumbelliferone

4-nitrophenol

4-nitrophenyl phosphate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

4-vinylguaiacol

4-hydroxybenzoate

urate

6,8-dihydroxypurine

8-hydroxypurine

benzene

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

protocatechuate

2,3-dihydroxybenzoate

3-demethylubiquinol-8

ubiquinol-8

demethylmenaquinol-8

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

4-methylphenol

salicylate

4-aminobenzoate

coumarinate

ferulate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

3-methoxy-4-hydroxyphenylglycol

all-trans-retinyl palmitate

all-trans-retinol

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

kanamycin B

blasticidin S

ferrichrome

D-glucono-1,5-lactone

acetyl-CoA

CoA-disulfide

3'-dephospho-CoA

malonyl-CoA

isobutanoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(E)-glutaconyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

4-hydroxybenzoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

oleoyl-CoA

palmitoyl-CoA

propanoyl-CoA

butanoyl-CoA

hexadecanedioyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

crotonyl-CoA

D-mannonate

D-gluconate

D-altronate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

sucrose

melibiose

α-lactose

α-maltose

maltopentaose

maltohexaose

maltoheptaose

maltotetraose

raffinose

stachyose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-mannose

D-glyceraldehyde

α-D-lyxopyranose

glycolaldehyde

D-xylulose

D-ribulose

L-ribulose

keto-D-fructose

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

glycerol

D-mannitol

D-mannitol 1-phosphate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

D-galactosylononitol

galactinol

lotaustralin

neolinustatin

linamarin

linustatin

taxiphyllin

methyl β-D-glucoside 6-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

sucrose 6^F-phosphate

α-lactose 6'-phosphate

β-D-cellobiose 6'-phosphate

aldehydo-D-galacturonate

(S)-lactaldehyde

(R)-lactaldehyde

acetaldehyde

formaldehyde

isobutanal

1-propanal

butan-1-al

phytenal

methylglyoxal

(R)-acetoin

diacetyl

L-carnitine

acetate

(R)-pantoate

D-tagaturonate

palmitate

butanoate

2-oxoglutarate

pyruvate

2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

propanoate

formate

(S)-lactate

(R)-lactate

(R)-glycerate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

3-carboxy-cis,cis-muconate

nicotinamide

6-caprolactam

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

acetamide

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

cholate

glycocholate

isocholate

3-dehydrocholate

ethylene glycol

(S)-propane-1,2-diol

(R)-propane-1,2-diol

myo-inositol

D-ononitol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycine betaine

choline

spermidine

putrescine

cadaverine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

thiocyanate

3-sulfopyruvate

L-cysteate

taurine

(R)-S-lactoylglutathione

thiosulfate

sulfate

hydrogencarbonate

superoxide

sulfite

hydrogensulfite

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

H⁺

Na⁺

ammonium

Pb²⁺

Hg²⁺

Mg²⁺

Zn²⁺

Cu²⁺

Ca²⁺

Ni²⁺

Fe²⁺

Cd²⁺

trimethyl sulfonium

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminobutanoate

2-iminosuccinate

thiamine

nicotinate

(S)-NADHX

(R)-NADHX

coenzyme A

(R)-lipoate

hydrogen cyanide

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

Hg⁰

oxygen

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

protoheme

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

cob(I)yrinate a,c-diamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

DNA with lesion