ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C6444

oxaloacetate

C11543

H2O

C1528

2-dehydropantoate

C1112

ManNAc-GlcNAc-PP-undecaprenol

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C1454

2,5-didehydro-D-gluconate

C3295

2-keto-D-gluconate

C10349

glycerone phosphate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C3850

5-amino-6-(D-ribitylamino)uracil

C12208

poly (glycerol phosphate)

C13909

CDP-glycerol

C4674

glutathione disulfide

C12162

hydrogen peroxide

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C8366

(indol-3-yl)acetamide

C11756

propionamide

C11479

phosphoenolpyruvate

C12176

histidinol

C12044

L-histidinol phosphate

C12178

histidinal

C12125

imidazole acetol-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C928

CO2

C6359

(S)-2-acetolactate

C891

citrate

C12214

(S)-4-amino-5-oxopentanoate

C12139

preuroporphyrinogen

C11767

porphobilinogen

C1231

5-aminolevulinate

C11715

quinolinate

C11857

β-nicotinate D-ribonucleotide

C11604

thiamine diphosphate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11802

4'-phosphopantetheine

C12352

(S)-dihydroorotate

C11832

orotidine 5'-phosphate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1268

(R)-4'-phosphopantothenate

C12364

isopentenyl diphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C12369

3-dehydroquinate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C3262

3-methyl-2-oxobutanoate

C11800

(R)-pantothenate

C12254

ethanolamine

C1353

3-phosphooxypyruvate

C1265

4-phosphooxy-L-threonine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C5991

3-keto-β-D-galactose

C13871

L-arogenate

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C6361

acetoacetate

C3482

dihydroxyacetone

C14074

prenyl diphosphate

C3322

(4Z)-2-oxohept-4-enedioate

C13672

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C3417

(S)-3-methyl-2-oxopentanoate

C3319

4-methyl-2-oxopentanoate

C939

butanoyl phosphate

C1431

3-dehydroshikimate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C873

coproporphyrinogen III

C11639

succinate semialdehyde

C11930

N-acetylglutamyl-phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C12056

L-arginino-succinate

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C15282

D-galactosamine-6-phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C13946

5-(methylsulfanyl)-α-D-ribose

C1108

acetyl phosphate

C537

CDP-ribitol

C12218

α-D-glucosamine 1-phosphate

C1102

O-acetyl-L-serine

C1440

nigerose

C3656

D-gluconate 6-phosphate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C13798

2-phenylethanol

C11976

2-methylbutanal

C13799

2-methylbutanol

C13801

3-methylbutanal

C13800

3-methylbutanol

C12102

isobutanol

C8410

indole-3-glycol aldehyde

C8344

indole-3-glycol

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8407

5-hydroxyindole acetaldehyde

C8399

5-hydroxytryptophol

C4676

glutathionylspermidine

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C11483

glycolate

C15215

(L-threonylcarbamoyl)adenylate

C13635

β-D-ribosylnicotinate

C4883

2-oleoylglycerol

C2580

methylsalicylate

C15056

salicyl alcohol

C14005

prephytoene diphosphate

C4037

presqualene diphosphate

C4201

squalene

C13627

DNA without lesion

C14202

hexulose 6-phosphate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C965

benzoylsuccinyl-CoA

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C6369

(S)-2-aceto-2-hydroxybutanoate

C11760

prephenate

C927

carbon monoxide

C11826

oxalosuccinate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C12494

N-acetyl-D-muramate 6-phosphate

C1325

4-amino-4-deoxychorismate

C9422

nicotinate adenine dinucleotide

C2191

carbamoyl phosphate

C14111

4-pyridoxolactone

C12078

itaconate

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C11652

shikimate 3-phosphate

C14137

4-acetamidobutanoate

C14179

4-acetamidobutanal

C11869

N2-succinylglutamate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C12409

creatinine

C148

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

C149

2,2'-disulfonyl azobenzene

C11771

phthalate

C12192

carbonic acid

C352

2-iminoacetate

C1024

aminoacetone

C11539

xanthine

C11653

shikimate

C15306

2,3-didehydroadipyl-CoA

C2586

(E)-4-coumaroyl-CoA

C12288

(E)-2-benzylidenesuccinyl-CoA

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C12016

(lipoyl)adenylate

C12325

1,4-dihydroxy-2-naphthoate

C12096

isochorismate

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C11838

2-succinylbenzoate

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C11874

N-succinyl-2-amino-6-ketopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C933

L-canavanine

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C7865

urea

C1196

S-methyl-5'-thioadenosine

C1415

3-hydroxyanthranilate

C11895

N-Formyl-L-kynurenine

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12848

N5-carboxyaminoimidazole ribonucleotide

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C12756

(2R)-2-amino-4-oxopentanoate

C1457

(2R,4S)-2, 4-diaminopentanoate

C1223

5-aminopentanoate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C14907

gallate

C1580

1,2,3,5-tetrahydroxybenzene

C11743

pyrogallol

C15155

phloroglucinol

C15072

dihydrophloroglucinol

C14754

3-hydroxy-5-oxohexanoate

C14495

3-hydroxy-5- oxohexanoyl-CoA

C12407

crotonate

C12402

cyclohex-1,5-diene-1-carbonyl-CoA

C1155

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

C1148

6-oxocyclohex-1-ene-1-carbonyl-CoA

C1399

3-hydroxypimeloyl-CoA

C1357

3-oxopimeloyl-CoA

C13930

cyclohexane-1-carboxylate

C13929

cyclohexane-1-carbonyl-CoA

C15180

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

C12394

6-phospho D-glucono-1,5-lactone

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C12164

H2

C6618

5-ureidoimidazole-4-carboxylate

C1323

5-aminoimidazole-4-carboxylate

C13967

4-aminoimidazole

C13912

3,5-dihydro-4H-imidazol-4-one

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C3376

(S)-4-hydroxy-2-oxohexanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12046

L-gulono-1,4-lactone

C14156

L-xylo-hex-3-ulono-1,4-lactone

C13983

α-D-galacturonate 1-phosphate

C1010

ammonia

C446

5-hydroxyindole thiazolidine carboxylate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12054

L-dehydro-ascorbate

C158

cyclic-2,3-O-oxalyl-L-threonate

C163

dehydroascorbate (bicyclic form)

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C162

cyclic- 3,4-O-oxalyl-L-threonate

C14153

2,3-dioxo-L-gulonate

C159

2-carboxy-L-xylonolactone

C160

2-carboxy-L-threo-pentonate

C7795

GDP

C10288

adenylo-succinate

C7741

IMP

C7745

GTP

C7757

ADP

C7844

ATP

C7809

AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7823

dADP

C7807

dGDP

C10266

ppGpp

C10267

pppGpp

C7827

GMP

C7783

dATP

C7751

dGTP

C7759

ITP

C7817

IDP

C7749

dITP

C7747

dIDP

C7785

hypoxanthine

C5552

5'-deoxyadenosine

C7755

2'-deoxyinosine

C7813

2'-deoxyadenosine

C7811

XMP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7652

cyclic-AMP

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C7848

2'-deoxyguanosine

C7840

dGMP

C7743

dAMP

C10263

ADP-α-D-glucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C7790

UDP-N-acetyl-α-D-mannosamine

C7722

UDP-α-D-glucuronate

C7780

UDP-α-D-glucose

C8666

UDP-α-D-galactose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7764

UDP-α-D-galacturonate

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C9455

guanine

C9454

adenine

C2226

purine

C8739

uracil

C10601

thymine

C9540

preQ1

C1817

cyclic di-3',5'-guanylate

C8770

dUMP

C8744

dTMP

C8755

dCMP

C8733

dCDP

C8752

dUDP

C8720

dTDP

C8772

dCTP

C8764

dTTP

C8724

dUTP

C8714

UDP

C8732

CDP

C4243

β-nicotinamide D-ribonucleotide

C4240

reduced β-nicotinamide D-ribonucleotide

C8761

CTP

C8760

UTP

C2245

CMP

C2241

UMP

C4018

NADP+

C4020

NAD+

C14497

NADPH

C14500

NADH

C2527

2'-deoxyuridine

C2519

thymidine

C2523

2'-deoxycytidine

C15091

inosine

C15088

adenosine

C15085

guanosine

C15094

xanthosine

C2706

uridine

C2702

cytidine

C7306

5'-deoxy-5'-fluoroadenosine

C11485

D-gluconate

C3679

L-gulonate

C3678

aldehydo-L-galactonate

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C11627

3'-ketolactose

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10351

D-ribitol 5-phosphate

C10356

4-phospho-D-erythronate

C8811

α-D-glucopyranose 1-phosphate

C8815

α-D-galactose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2115

α-D-galactose 6-phosphate

C2116

β-D-galactose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C10323

D-tagatofuranose 6-phosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2057

α-D-ribose-1-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6673

sucrose 6F-phosphate

C6661

sucrose 6G-phosphate

C6551

α-lactose 6'-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10372

a peptidoglycan dimer (S. aureus)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3135

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

C3124

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C8835

β-D-fructofuranose

C2858

glycolaldehyde

C2065

aldehydo-D-ribose

C2063

β-D-ribopyranose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C2140

β-D-mannopyranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C2141

aldehydo-D-mannose

C9494

D-glyceraldehyde

C2012

keto-D-fructose

C5286

N-acetyl-β-D-glucosamine

C3731

glycerol

C6561

D-mannitol

C3694

XXXG xyloglucan oligosaccharide

C10688

maltotriose

C10693

sucrose

C6821

α-lactose

C6823

α,α-trehalose

C10689

maltotetraose

C10690

maltopentaose

C10691

maltohexaose

C10692

maltoheptaose

C5718

selaginose

C3689

XXLG xyloglucan oligosaccharide

C3687

XLXG xyloglucan oligosaccharide

C3685

XLLG xyloglucan oligosaccharide

C2021

aldehydo-D-galacturonate

C6829

salicylaldehyde

C10966

all-trans-retinol

C3727

all-trans-retinyl palmitate

C9077

(2E,6E)-farnesyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C10874

apo-4'-lycopenal

C10864

all-trans-phytoene

C10862

15-cis-phytoene

C10942

all-trans phytofluene

C5001

apo-4'-lycopenoate

C9641

betanidin quinone

C9712

betanidin

C5119

4-cis-undecenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5092

(3R)-hydroxy-5-trans-dodecenoyl-CoA

C5102

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C5378

geranylgeranyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C3117

dioleoyl phosphatidate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10554

1,2-dibutyrin

C10569

tributyrin

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C6488

phytate

C6477

D-myo-inositol (1,2,3,5,6) pentakisphosphate

C2758

3,4-dihydroxyphenylglycolaldehyde

C2763

3,4-dihydroxyphenylglycol

C11421

protocatechuate

C3450

ethanol

C14807

phytol

C3447

propan-1-ol

C3449

butan-1-ol

C3448

methanol

C2849

3-(N-morpholino)propanal

C2860

fluoroacetaldehyde

C6090

methylglyoxal

C3647

phenylacetaldehyde

C3641

(4-hydroxyphenyl)acetaldehyde

C3649

benzaldehyde

C14804

phytenal

C6246

(S)-lactaldehyde

C3485

butan-1-al

C3500

acetaldehyde

C3483

formaldehyde

C3494

isobutanal

C3523

1-propanal

C3529

1-octanal

C10060

(R)-acetoin

C10143

menadione

C8310

Reactive Blue 5

C2040

diacetyl

C5702

a coenzyme-A group

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C3308

pyruvate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3351

glyoxylate

C11429

salicylate

C8968

benzoate

C8974

4-aminobenzoate

C11482

(R)-pantoate

C11517

acetate

C11481

orotate

C11509

fluoroacetate

C4985

(S)-1-pyrroline-5-carboxylate

C2047

aldehydo-D-glucuronate

C2774

pristanate

C3418

butanoate

C3383

palmitate

C3409

octanoate

C3412

decanoate

C6379

linoleate

C13210

oleate

C6389

γ-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C10590

α-linolenate

C13298

(3E,5Z)-tetradecadienoate

C13260

phytenate

C13266

(15Z)-tetracosenoate

C6371

3-oxoadipate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C6186

(S)-lactate

C11476

(R)-glycerate

C11212

(R)-3-hydroxybutanoate

C8534

cis-aconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C5596

L-aspartate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C3526

L-kynurenine

C3536

L-α-amino-ε-keto-pimelate

C12201

L-2-amino-3-oxobutanoate

C12073

L-aspartyl-4-phosphate

C10823

3-hydroxy-L-kynurenine

C14015

N6-hydroxy-L-lysine

C5553

N-formimino-glycine

C13322

N-carbamoyl-L-aspartate

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C3628

sarcosine

C4740

S-methyl-L-methionine

C3402

3-phospho-L-serine

C8799

D-alanine

C8797

D-glutamate

C12223

D-ornithine

C8796

D-proline

C8805

D-aspartate

C5605

L-histidine

C5573

L-tyrosine

C2469

L-phenylalanine

C5575

L-tryptophan

C5609

L-glutamine

C12067

glycine

C5579

L-serine

C5643

L-asparagine

C5577

L-threonine

C5612

L-cysteine

C5607

L-glutamate

C5642

L-arginine

C5584

L-lysine

C5630

Nω-hydroxy-L-arginine

C5581

L-proline

C5597

L-alanine

C5588

L-leucine

C11443

creatine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C5592

L-selenocysteine

C5571

L-valine

C5603

L-isoleucine

C5583

L-methionine

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C12231

L-ornithine

C12303

L-citrulline

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12247

L-homocysteine

C12227

O-succinyl-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12239

L-aspartate 4-semialdehyde

C12237

L-canaline

C12245

L-homoserine

C12263

1-aminocyclopropane-1-carboxylate

C12241

L-4-hydroxyglutamate semialdehyde

C5585

meso-diaminopimelate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C7139

4-tyrosol

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C6975

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

C3093

urate

C7151

6,8-dihydroxypurine

C6920

8-hydroxypurine

C9923

6,7-dehydrobaicalein

C9939

baicalein

C13166

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C6043

4-methylphenol

C2915

menadiol

C1867

3-demethylubiquinol-8

C1863

demethylmenaquinol-8

C1680

menaquinol-8

C5543

ubiquinol-8

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C8490

3-methoxy-4-hydroxyphenylglycol

C13354

preQ0

C13422

hydrogen cyanide

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12674

7,8-dihydroneopterin 2',3'-cyclic phosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12696

7,8-dihydromonapterin

C12664

7,8-dihydroneopterin

C12708

7,8-dihydroneopterin 3'-phosphate

C10609

7,8-dihydropteroate

C7129

5,6,7,8-tetrahydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10052

FMN

C10988

riboflavin

C10053

FAD

C10049

FMNH2

C15044

reduced riboflavin

C10050

FADH2

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C8751

aminomethylpyrimidine

C8727

formylaminopyrimidine

C9861

cobyrinate

C1705

sirohydrochlorin

C2311

precorrin-2

C2305

precorrin-1

C9871

cobalt-precorrin-5A

C9847

cobalt-precorrin-4

C9818

cobalt-precorrin-6A

C9813

cobalt-precorrin-5B

C9842

cobalt-precorrin-6B

C9866

cobalt-precorrin-8

C9837

cobalt-precorrin-7

C9822

cobalt-precorrin-3

C5221

adenosylcobalamin

C9874

cob(I)alamin

C10994

thiamine

C10982

nicotinate

C10986

L-ascorbate

C10996

nicotinamide

C4200

pyridoxal

C4210

pyridoxal 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C10614

coenzyme A

C10611

(R)-lipoate

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C5394

(R)-NADHX

C5392

(S)-NADHX

C2598

D-glucono-1,5-lactone

C10076

L-galactono-1,4-lactone

C5298

acetyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4937

3'-dephospho-CoA

C5313

2-methylbutanoyl-CoA

C4922

isobutanoyl-CoA

C4901

succinyl-CoA

C5314

2-methylacetoacetyl-CoA

C5014

phenylacetyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C4913

malonyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5282

itaconyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C4911

methylacrylyl-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C4924

glutaryl-CoA

C4927

(E)-glutaconyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C5635

oleoyl-CoA

C10758

3-oxoadipyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C6200

3-oxohexanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C14662

hexanoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C2744

(S)-3-hydroxyhexadecanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C11400

phytenoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C6146

(2E)-octadec-2-enoyl-CoA

C1337

crotonyl-CoA

C9096

(indol-3-yl)acetate

C11480

phenylacetate

C9098

methyl (indol-3-yl)acetate

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C10542

androst-4-ene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C7869

acetamide

C11281

2-chloroacetate

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C10301

agmatine

C3574

spermidine

C3548

putrescine

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C7016

sulfite

C8958

superoxide

C7036

hydrogencarbonate

C7022

selenide

C7024

thiosulfate

C7034

hydrogensulfite

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C4320

H+

C4318

K+

C4328

ammonium

C11007

Ni2+

C11019

Ca2+

C11023

Fe2+

C11006

Co2+

C1689

trimethyl sulfonium

C4768

3-(methylsulfanyl)propanal

C4704

methionol

C4734

dimethyl sulfide

C4606

S-(hydroxymethyl)glutathione

C4678

glutathione

C4126

1-butanesulfonate

C4136

isethionate

C4124

3-(N-morpholino)propanesulfonate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C3978

thiocyanate

C8962

nitric oxide

C8959

monodehydroascorbate radical

C2951

hippurate

C6290

(S)-3-hydroxy-isobutanoate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C7121

oxygen

C7118

hydrogen sulfide

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7658

uroporphyrinogen-III

C6624

protoheme

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C9845

cobalt-sirohydrochlorin

C9821

cobalt-factor III

C803

ethylphosphate

C10799

DNA with lesion