an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-aminoacetaldehyde

(S)-2,3-dihydrodipicolinate

4-amino-4-deoxychorismate

2-oxopent-4-enoate

2,6-dioxo-6-phenylhexa-3-enoate

N²-succinylglutamate

butanoyl phosphate

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

succinate semialdehyde

4-aminobutanoate

2-(α-hydroxyethyl)thiamine diphosphate

hydrogen peroxide

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

dialurate

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-iminoacetate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

quinolinate

2-amino-3-carboxymuconate-6-semialdehyde

2-dehydro-3-deoxy-D-galactonate 6-phosphate

isobutanol

4-amino-2-methyl-5-pyrimidinemethanol

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

1-piperideine 6-carboxylate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

pyruvic oxime

ammonia

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

oxalate

H₂O

3-dehydroshikimate

3-dehydroquinate

CO₂

4-pyridoxolactone

phosphoenolpyruvate

oxaloacetate

oxalosuccinate

luteolin 7-O-β-D-glucuronide

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

3-keto-β-D-galactose

α-D-glucosamine 1-phosphate

ethanolamine

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

lipoamide

dihydrolipoamide

salicyl alcohol

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(R)-2,3-dihydroxy-3-methylpentanoate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

O-ureido-L-homoserine

carbamoyl phosphate

nigerose

coproporphyrinogen III

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

O-acetyl-L-serine

orotidine 5'-phosphate

(S)-dihydroorotate

glycolate

2-phosphoglycolate

acetoacetate

4-fumaryl-acetoacetate

4-methyl-2-oxopentanoate

canavaninosuccinate

L-arginino-succinate

L-canavanine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

4-methylumbelliferyl glucoside

cis-coumarinic acid-β-D-glucoside

4-hydroxybenzaldehyde

scopolin

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

hydroxylamine

cis,cis-muconate

(+)-muconolactone

muconolactone

(R)-mandelate

(S)-mandelate

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate

shikimate 3-phosphate

methylsalicylate

2-dehydropantoate

acetyl phosphate

DNA without lesion

glycerone phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

(R)-pantothenate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

2-dehydro-3-deoxy-D-gluconate

5-dehydro-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

carbon monoxide

H₂

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

autoinducer 2

S-ribosyl-L-homocysteine

nicotinate adenine dinucleotide

xanthine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-C-methyl-D-erythritol 4-phosphate

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,4-dihydroxy-2-naphthoate

2-dehydro-3-deoxy-D-galactonate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

urea

(S)-2-amino-6-oxohexanoate

norspermidine

carboxynorspermidine

β-nicotinate D-ribonucleotide

(L-threonylcarbamoyl)adenylate

selenophosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

γ-L-glutamyl 5-phosphate

thiamine diphosphate

β-D-ribosylnicotinate

(S)-2,3,4,5-tetrahydrodipicolinate

hydroxypyruvate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

α-ribazole 5'-phosphate

α-ribazole

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

citrate

5-(methylsulfanyl)-α-D-ribose

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

5,6-dimethylbenzimidazole

(R)-1-amino-2-propanol O-2-phosphate

hydrogen selenide

5,10-methenyltetrahydrofolate mono-L-glutamate

nitric oxide

1-oleoyl-2-lyso-glycerone phosphate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

oxygen

hydrogen sulfide

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

hemin

protoheme

hydrogen cyanide

nitrous oxide

adenosyl-cobinamide phosphate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

adenosylcobalamin

cob(I)alamin

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

cob(II)yrinate a,c-diamide

cobyrinate

cob(II)yrinate c-monoamide

adenosylcobyrate

ethylphosphate

DNA with lesion

L-α-amino-ε-keto-pimelate

glycine

L-alanine

L-glutamine

L-serine

L-leucine

L-proline

L-histidine

L-arginine

L-lysine

L-glutamate

D-glutamate

β-alanine

L-threo-3-phenylserine

L-citrulline

L-isoleucine

L-valine

L-methionine

L-phenylalanine

L-aspartate

L-asparagine

L-threonine

L-cysteine

L-tyrosine

O-succinyl-L-homoserine

L-cystine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-canaline

L-ornithine

L-homocysteine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-homoserine

S-sulfo-L-cysteine

L-allo-threonine

meso-diaminopimelate

L-selenocysteine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-cystathionine

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

L-saccharopine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-α-acetyl lysine methyl ester

O-acetyl-L-homoserine

N-formimino-glycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

D-aspartate

D-methionine

D-alanine

1-(5-phospho-β-D-ribosyl)-AMP

AMP

ADP

ATP

ppGpp

GDP

pppGpp

GTP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

GMP

hypoxanthine

IMP

dADP

dATP

dGDP

dGTP

2'-deoxyguanosine

2'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyinosine

XMP

ITP

dIMP

dITP

XTP

adenylo-succinate

IDP

5'-deoxy-5'-fluoroadenosine

NADPH

NADH

NADP⁺

NAD⁺

preQ₁

purine

guanine

adenine

uracil

thymine

cyclic di-3',5'-guanylate

dTDP

dUDP

dCDP

dTTP

dCTP

dUTP

dUMP

dCMP

dTMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CMP

UMP

UDP

CDP

UTP

CTP

UDP-α-D-glucose

dTDP-α-D-glucose

GDP-α-D-glucose

ADP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

adenosine

guanosine

xanthosine

inosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

dipicolinate

orotate

(S)-1-pyrroline-5-carboxylate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

precorrin-3A

precorrin-2

precorrin-1

precorrin-5

precorrin-4

precorrin-3B

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

sirohydrochlorin

(+)-dihydrokaempferol

(+)-taxifolin

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucocyanidin

coumarin

scopoletin

4-methylumbelliferone

luteolin

6,8-dihydroxypurine

8-hydroxypurine

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

hydroquinone

protocatechuate

catechol

demethylmenaquinol-8

4-methylphenol

salicylate

4-aminobenzoate

benzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

coumarinate

benzaldehyde

all-trans-retinyl palmitate

all-trans-retinol

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-oleoyl-sn-glycerol 3-phosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

achromobactin

D-glucono-1,5-lactone

isobutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

formyl-CoA

oxalyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

acetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

2-methylacetoacetyl-CoA

4-hydroxybutanoyl-CoA

malonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

phytenoyl-CoA

oleoyl-CoA

octanoyl-CoA

decanoyl-CoA

cerotoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

(S)-malyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

L-idonate

D-mannonate

D-altronate

D-gluconate

D-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

allolactose

sucrose

melibiose

α-lactose

α-maltose

maltohexaose

maltoheptaose

maltotetraose

maltopentaose

raffinose

stachyose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

glycolaldehyde

L-glyceraldehyde

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-neuraminate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

glycerol

galactitol

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

arbutin-6-phosphate

salicin 6-phosphate

lotaustralin

methyl β-D-glucoside 6-phosphate

taxiphyllin

linamarin

linustatin

neolinustatin

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

sucrose 6^F-phosphate

sucrose 6^G-phosphate

β-D-cellobiose 6'-phosphate

D-ribulose-1,5-bisphosphate

aldehydo-D-galacturonate

(R)-lactaldehyde

(S)-lactaldehyde

butan-1-al

formaldehyde

1-propanal

acetaldehyde

isobutanal

phytenal

methylglyoxal

diacetyl

pyruvate

2-oxoglutarate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

octanoate

decanoate

acetate

formate

butanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

chorismate

succinate

fumarate

(S)-malate

(4S)-4-hydroxy-2-oxoglutarate

5-chloro-5-deoxy-D-ribonate

(R)-pantoate

D-tagaturonate

β-D-glucuronate

(2S,3S)-2-methylcitrate

cis-aconitate

D-threo-isocitrate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

palmitate

pristanate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

(15Z)-tetracosenoate

phytenate

leukotriene-E4

leukotriene-D4

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

isocholate

3-dehydrocholate

cholate

glycocholate

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

ethylene glycol

(R)-propane-1,2-diol

(S)-propane-1,2-diol

ethanol

butan-1-ol

phytol

methanol

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

agmatine

cadaverine

spermidine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

dimethyl sulfide

methanethiol

thiocyanate

glutathione

taurine

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

Fe³⁺

Fe²⁺

Ni²⁺

Co²⁺

ammonium

H⁺

trimethyl sulfonium

hydrogensulfite

molybdate

hydrogencarbonate

selenide

sulfite

thiosulfate

chloride

phosphate

diphosphate

triphosphate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminosuccinate

2-iminobutanoate

nicotinate

thiamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

(R)-NADHX

(S)-NADHX

coenzyme A

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile