an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

citrate

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N-Formyl-L-kynurenine

ethanolamine

xanthine

prephytoene diphosphate

(S)-ureidoglycolate

urea

O-acetyl-L-serine

hydrogen selenide

coproporphyrinogen III

glycerone phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

prephenate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

1-piperideine 6-carboxylate

carbonic acid

enol-phenylpyruvate

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

oxalosuccinate

(S)-4-hydroxy-2-oxopentanoate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

oxaloacetate

H₂

anthranilate

(S)-2-amino-6-oxohexanoate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

nicotinate adenine dinucleotide

N-acetylglutamyl-phosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

5-enolpyruvoyl-shikimate 3-phosphate

acetoacetate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

thiamine diphosphate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-phosphooxypyruvate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

α-D-glucosamine 1-phosphate

3'-phosphoadenylyl-sulfate

preuroporphyrinogen

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

hydrogen peroxide

CO₂

β-nicotinate D-ribonucleotide

quinolinate

H₂O

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

kynurenate

xanthurenate

picolinate

5,6-dihydroxyindole

ammonia

4-oxalocrotonate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

L-dopachrome

1,5-anhydro-D-fructose

octadecanal

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

N⁵-carboxyaminoimidazole ribonucleotide

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

4-amino-2-methyl-5-pyrimidinemethanol

2-maleylacetate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

N¹-amidinostreptamine 6-phosphate

streptidine 6-phosphate

streptomycin 6-phosphate

CDP-N-methyl-L-glucosamine

dTDP-L-dihydrostreptose

dihydrostreptomycin 6-phosphate

O-1,4-α-L-dihydrostreptosyl-streptidine 6-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2,2',3,3'-tetrahydroxybiphenyl

2,2',3-trihydroxybiphenyl

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

isochorismate

1-pyrroline

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

glutathione disulfide

3-hydroxyanthranilate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

1,4-dihydroxy-2-naphthoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

pyrogallol

oxidized DCPIP

reduced DCPIP

chlorate

L-3-cyclohex-2'-enylalanine

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

dehydroprephenate

(R)-1-amino-2-propanol O-2-phosphate

pseudouridine

dialurate

salicyl alcohol

methylsalicylate

N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine

guanidinoacetate

pseudouridine 5'-phosphate

formamide

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

carbon monoxide

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

chlorite

creatinine

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(6E)-8-oxolinalool

(6E)-8-hydroxylinalool

nitrilotriacetate

iminodiacetate

α-ribazole

1-deoxy-L-glycero-tetrulose 4-phosphate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

(2S)-lactyl-2-diphospho-5'-guanosine

2-isopropylmaleate

(L-threonylcarbamoyl)adenylate

nigerose

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

hydrogenobyrinate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

cis-stilbene oxide

(1R,2R)-1,2-diphenylethane-1,2-diol

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

S-methyl-5'-thioadenosine

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate

4-(2-aminophenyl)-2,4-dioxobutanoate

4-aminobutanoate

dethiobiotin

succinate semialdehyde

squalene

hop-22(29)-ene

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

S-Inosyl-L-homocysteine

glycolate

pimeloyl-CoA

γ-L-glutamyl 5-phosphate

D-galacto-hexodialdose

3-mercaptopyruvate

(S)-5-hydroxyisourate

S-(hydroxymethyl)mycothiol

S-formylmycothiol

1,4-dihydroxy-2-naphthoyl-CoA

4-methylbenzyl alcohol

3-methylbenzyl alcohol

3-methylbenzaldehyde

2-amino-3-carboxymuconate-6-semialdehyde

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

(2Z,2E)-2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate

(2Z,2E)-2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate

2,6-dioxo-6-phenylhexa-3-enoate

(2R,3S)-2,3-dihydroxy-2,3-dihydro-p-cumate

2,3-dihydroxy-p-cumate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

2-oxopent-4-enoate

2-oxoglutaramate

prenyl diphosphate

3-hydroxypropanoate

hydrogenobyrinate a,c-diamide

dihydroxyacetone

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

1-phosphatidyl-myo-inositol

1-phosphatidyl-myo-inositol 2-mannose

4-amino-4-deoxychorismate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

2,3,5,6-tetracholorophenol

6-deoxyerythronolide B

2-aminomalonate semialdehyde

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

all-trans-13,14-dihydroretinol

2-oleoylglycerol

arsenite

N-(5-phosphoribosyl)-anthranilate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

2-dehydropantoate

L-canavanine

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

N-acetyl-L-glutamate 5-semialdehyde

5-amino-6-(D-ribitylamino)uracil

orotidine 5'-phosphate

(S)-dihydroorotate

carbamoyl phosphate

3-dehydroquinate

shikimate 3-phosphate

shikimate

3-dehydroshikimate

phthalate

phthalate 4,5-cis-dihydrodiol

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

phenylacetone

oxalate

acetyl phosphate

2-C-methyl-D-erythritol 4-phosphate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

isopentenyl diphosphate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

porphobilinogen

5-oxo-L-proline

β-D-ribosylnicotinate

2-aminoacetaldehyde

(R)-pantothenate

propane-1,3-diamine

2-(β-D-glucosyl)-sn-glycerol 3-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

(R)-2,3-dihydroxy-3-methylpentanoate

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-homocysteine

4-methylphenol

phenylacetate

ethylphosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosylcobyrate

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cobyrinate

cob(II)yrinate a,c-diamide

Mg-protoporphyrin

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

N₂

hydrogen cyanide

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

siroheme

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

2-fluorobenzoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-iodobenzoate

2-bromobenzoate

2-chlorobenzoate

superoxide

monodehydroascorbate radical

hydroxyl radical

4-nitrophenyl phosphate

4-nitrophenol

4-nitrobenzyl alcohol

4-nitrobenzaldehyde

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-sulfino-L-alanine

methanethiol

mycothiol

glutathione

thiocyanate

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

coenzyme M

taurine

L-cysteate

3-sulfopyruvate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

Fe³⁺

Fe²⁺

Cu²⁺

Co²⁺

Mg²⁺

Ca²⁺

Cd²⁺

Ni²⁺

H⁺

ammonium

K⁺

trimethyl sulfonium

thiosulfate

selenate

hydrogencarbonate

molybdate

sulfite

OH^-

hydrogensulfite

selenite

perchlorate

selenide

sulfate

phosphonate

phosphate

triphosphate

diphosphate

iodide

bromide

fluoride

chloride

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

4-aminobutanal

putrescine

spermidine

betaine aldehyde

glycine betaine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2-chloromaleylacetate

chloroethylmalonyl-CoA

4-chloro-crotonyl-CoA

4-chloro-3-hydroxybutyryl-CoA

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

5-chloro-5-deoxy-D-ribose

5-chloro-5-deoxy-D-ribono-γ-lactone

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

pentachlorophenol

allantoate

acetamide

(S)-(+)-allantoin

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

ethene

heptadecane

methane

3-oxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

17β-estradiol

estrone

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

chenodeoxycholate

cholate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

malonyl-CoA

acetyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

2-methylbutanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

4-hydroxybutanoyl-CoA

isovaleryl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2E)-tetradec-2-enoyl-CoA

(3S)-citryl-CoA

trans-caffeoyl-CoA

trans-feruloyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

3-hydroxypropanoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

phenylacetyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

chenodeoxycholoyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

formyl-CoA

oxalyl-CoA

3'-dephospho-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

2-methylacetoacetyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

propanoyl-CoA

butanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

myristoyl-CoA

palmitoyl-CoA

stearoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

O-acetyl-L-carnitine

all-trans-retinyl palmitate

L-galactono-1,4-lactone

erythronolide B

3-α-mycarosylerythronolide B

erythromycin D

D-glucono-1,5-lactone

benzyl acetate

1-oleoyl-sn-glycerol

FAD

FMN

FMNH₂

FADH₂

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

caldariellaquinone

coenzyme A

molybdopterin

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

riboflavin

L-ascorbate

nicotinate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine

pyridoxal

L-carnitine

menadione

all-trans-retinol

all-trans-retinal

(S)-1-pyrroline-5-carboxylate

salinosporamide A

precorrin-6B

precorrin-6A

precorrin-4

precorrin-5

precorrin-3A

precorrin-7

precorrin-8x

precorrin-3B

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dAMP

dGMP

dGTP

dATP

dITP

dGDP

dADP

dIDP

GDP

ADP

IDP

IMP

XMP

AMP

GMP

GTP

ATP

ITP

uracil

CTP

dCDP

CDP

dUDP

UDP

UTP

cytosine

dCMP

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

cytidine 2',3'-cyclic monophosphate

cytidine-3'-monophosphate

orotate

dTTP

dCTP

dUTP

dUMP

dTMP

dTDP

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-D-desosamine

dTDP-β-L-mycarose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

isoguanine

N¹-methyladenine

N3-methylcytosine

N¹-ethyladenine

2',4,4',6'-tetrahydroxychalcone

baicalein

6,7-dehydrobaicalein

acrylonitrile

2,2'-dihydroxybiphenyl

salicylaldehyde

actinorhodin intermediate

actinorhodin

futalosine

dehypoxanthine futalosine

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

3-hexaprenyl-4-hydroxybenzoate

urate

benzyl alcohol

4-hydroxybenzoate

p-cumic aldehyde

4-methylbenzaldehyde

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

2,3,5,6-tetrachlorohydroquinone

menadiol

4-isopropylbenzyl alcohol

phenol

2,3-dihydroxybenzoate

catechol

L-dopa

protocatechuate

salicylate

4-aminobenzoate

benzoate

4-methylbenzoate

chorismate

fumarate

L-aspartate

succinate

(S)-malate

(2R)-homocitrate

cis-homoaconitate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

4-hydroxybutanoate

(S)-lactate

(R)-lactate

formate

pyruvate

acetate

propanoate

decanoate

octanoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

pristanate

palmitate

D-gluconate

(R)-pantoate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

(3S)-3-isopropenyl-6-oxoheptanoate

(3R)-3-isopropenyl-6-oxoheptanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-kynurenine

L-serine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

glycine

L-glutamine

L-leucine

L-proline

L-alanine

L-glutamate

D-glutamate

L-lysine

L-histidine

L-arginine

L-tyrosine

L-asparagine

L-threonine

L-cysteine

L-tryptophan

L-phenylalanine

D-phenylalanine

D-aspartate

D-alanine

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-selenomethionine

S-sulfanyl-L-cysteine

3-phospho-L-serine

sarcosine

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N⁶-hydroxy-L-lysine

N-carbamoyl-L-aspartate

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-citrulline

L-valine

L-isoleucine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homoserine

O-phospho-L-homoserine

L-4-hydroxyglutamate semialdehyde

1-aminocyclopropane-1-carboxylate

L-cystine

L-glutamate-5-semialdehyde

L-ornithine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L,L-diaminopimelate

L-2,4-diaminobutanoate

a coenzyme-A group

methylglyoxal

diacetyl

dopaquinone

glycolaldehyde

3-(N-morpholino)propanal

acetaldehyde

1-propanal

1-octanal

isobutanal

butan-1-al

formaldehyde

(R)-lactaldehyde

(S)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

β-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

butan-1-ol

methanol

ethanol

phytol

glycerol

galactitol

D-mannitol

D-sorbitol

L-iditol

(3R)-linalool

(3S)-linalool

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

myo-inositol

D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol

D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol 4-phosphate

1-amino-1-deoxy-scyllo-inositol 4-phosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

apo-4'-lycopenal

15-cis-phytoene

geranyl diphosphate

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(+)-(1S,4R)-limonene-1,2- epoxide

(1R,4S)-1-hydroxymenth-8-en-2-one

(1S,4R)-1-hydroxymenth-8-en-2-one

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

phytyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

5-deoxy-dihydrokalafungin

(S)-DNPA

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

leucodopachrome

betanidin

betanidin quinone

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

iron(III) dicitrate

ferric-enterobactin complex

dihydrokalafungin

streptomycin

1-(β-D ribofuranosyl)nicotinamide

maltotriose

selaginose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

α,α-trehalose

1,5-anhydro-D-mannitol

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

keto-L-sorbose

keto-D-fructose

β-D-fructofuranose

D-xylulose

D-ribulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

adenylo-succinate

8-oxo-GTP

8-oxo-dGTP

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

cyclic-GMP

pppGpp

ppGpp

5'-deoxyadenosine

5-hydroxy-CTP

2-hydroxy-dATP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate