an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

1-pyrroline

1-piperideine 6-carboxylate

mercuriphenyl acetate

5-oxo-L-proline

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(R)-4'-phosphopantothenoyl-L-cysteine

2-iminoacetate

3'-ketosucrose

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

nicotinate adenine dinucleotide

4-amino-2-methyl-5-pyrimidinemethanol

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

autoinducer 2

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

5-methylcytosine

dihydroxyacetone

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

5-amino-6-(D-ribitylamino)uracil

α-D-glucosamine 1-phosphate

2-phosphoglycolate

(S)-2-acetolactate

5-dehydro-D-gluconate

(S)-2-aceto-2-hydroxybutanoate

glycolate

L-selenocystathionine

carbonic acid

(E)-3-(methoxycarbonyl)pent-2-enedioate

ammonia

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

histidinal

itaconate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-dehydro-3-deoxy-D-gluconate

histidinol

D-erythro-imidazole-glycerol-phosphate

5-dehydro-4-deoxy-D-glucarate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

H₂

oxalosuccinate

carbon monoxide

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

N-(5-phosphoribosyl)-anthranilate

lipid X

lipid A disaccharide (E. coli)

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-deoxy-α-ribose 1-phosphate

S-ribosyl-L-homocysteine

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

citrate

S-adenosyl 3-(methylsulfanyl)propylamine

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

4-amino-4-deoxychorismate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

tartronate semialdehyde

D-glycero-β-D-manno-heptose 1,7-bisphosphate

4-aminobutanoate

D-glycero-β-D-manno-heptose 1-phosphate

3-oxopropanoate

3-deoxy-α-D-manno-2-octulosonate

succinate semialdehyde

urea-1-carboxylate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

5-enolpyruvoyl-shikimate 3-phosphate

β-nicotinate D-ribonucleotide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(S)-4-amino-5-oxopentanoate

imidazole acetol-phosphate

L-histidinol phosphate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

1,4-dihydroxy-2-naphthoyl-CoA

xanthine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-succinyl-L,L-2,6-diaminopimelate

N,N-dimethyl-1,4-phenylenediamine

5-aminolevulinate

thiamine phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

anthranilate

1,4-dihydroxy-2-naphthoate

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

(R)-4-phosphopantoate

2-C-methyl-D-erythritol 4-phosphate

carbamoyl phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

O-ureido-L-homoserine

DNA without lesion

2-keto-L-gulonate

2,5-didehydro-D-gluconate

pimeloyl-CoA

salicyl alcohol

methylsalicylate

2-(α-hydroxyethyl)thiamine diphosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

thiamine diphosphate

orotidine 5'-phosphate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

(S)-2-amino-6-oxohexanoate

7,8-diaminopelargonate

dethiobiotin

porphobilinogen

preuroporphyrinogen

3-deoxy-D-manno-octulosonate 8-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

hydroxypyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

selenophosphate

hydrogen selenide

O-acetyl-L-serine

oxaloacetate

phosphoenolpyruvate

(indol-3-yl)pyruvate

enol-phenylpyruvate

L-arginino-succinate

canavaninosuccinate

L-canavanine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(S)-dihydroorotate

1-deoxy-L-glycero-tetrulose 4-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3-keto-β-D-galactose

4-guanidinobutyramide

urea

glutathione disulfide

N-acetyl-D-muramate 6-phosphate

isopentenyl diphosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-oleoylglycerol

ethanolamine

hydroxylamine

γ-L-glutamyl 5-phosphate

(R)-pantothenate

2-deoxy-D-glucose 6-phosphate

(R)-4'-phosphopantothenate

2-deoxy-D-glucose

glycerone phosphate

hydrogen peroxide

phthalate

2,2'-disulfonyl azobenzene

prephenate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

2-aminomalonate semialdehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

acetyl phosphate

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

H₂O

2-methylbutanol

2-methylbutanal

2-phenylethanol

isochorismate

5-phospho-β-D-ribosylamine

3-dehydroshikimate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-dehydroquinate

shikimate

shikimate 3-phosphate

4'-phosphopantetheine

lipid IV_A

coproporphyrinogen III

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

cobyrinate

protoheme

hydrogen cyanide

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

siroheme

hydrogen sulfide

Hg⁰

oxygen

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

4-dimethylaminophenylazobenzene

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

4-methylphenol

L-homocysteine

2-iminopropanoate

2-iminobutanoate

superoxide

agmatine

4-aminobutanal

spermidine

putrescine

betaine aldehyde hydrate

choline

betaine aldehyde

glycine betaine

tyramine

aniline

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphocholine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-β-neuraminate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

estrone

3-β-hydroxyandrost-5-en-17-one

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

thiobenzoate

thiophenol

furfuryl thiol

thiocyanate

glutathione

methanethiol

(S)-methyl thiobenzoate

thioanisole

furfuryl methyl sulfide

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

ammonium

H⁺

Co²⁺

Fe²⁺

Hg²⁺

trimethyl sulfonium

hydrogensulfite

molybdate

selenide

nitrite

nitrate

thiosulfate

sulfate

sulfite

hydrogencarbonate

phosphate

triphosphate

diphosphate

dihomo γ-linolenoyl-CoA

itaconyl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

succinyl-CoA

malonyl-CoA

acetyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

phytenoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

all-trans-retinyl palmitate

D-glucono-1,5-lactone

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

thiamine

riboflavin

pyridoxal

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

cyclic pyranopterin phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

inosine

guanosine

xanthosine

adenosine

hypoxanthine

dGMP

dAMP

dATP

dGTP

dITP

dIDP

dADP

dGDP

IDP

ADP

GDP

GMP

AMP

IMP

XMP

GTP

ITP

ATP

cytosine

dTDP

dTTP

dCTP

dUTP

dTMP

dUMP

cytidine-3'-monophosphate

uridine 3'-monophosphate

dCMP

uracil

CTP

UTP

orotate

dUDP

UDP

dCDP

CDP

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-α-D-glucose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

UMP

CMP

preQ₁

preQ₀

benzene

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

protocatechuate

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

salicylate

4-aminobenzoate

chorismate

L-aspartate

fumarate

succinate

(S)-malate

D-galactarate

3-carboxy-cis,cis-muconate

trans-aconitate

(2S,3S)-2-methylcitrate

cis-aconitate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

D-threo-isocitrate

(R)-lactate

(S)-lactate

formate

pyruvate

acetate

decanoate

octanoate

3-oxoadipate

D-mannonate

D-gluconate

D-tagaturonate

aldehydo-D-galacturonate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

stearate

pristanate

palmitate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

L-proline

L-alanine

glycine

L-glutamine

L-leucine

D-glutamate

L-glutamate

L-arginine

L-histidine

L-lysine

L-tryptophan

L-tyrosine

L-phenylalanine

D-alanine

seleno-L-homocysteine

L-aspartyl-4-phosphate

3-phospho-L-serine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

N-α-acetyl lysine methyl ester

O-acetyl-L-homoserine

L-asparagine

L-threonine

L-cysteine

L-citrulline

L-valine

L-isoleucine

O-succinyl-L-homoserine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

L-ornithine

L-canaline

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

a coenzyme-A group

methylglyoxal

diacetyl

acetaldehyde

1-propanal

isobutanal

(S)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

methanol

ethanol

propan-1-ol

phytol

glycerol

D-sorbitol 6-phosphate

D-mannitol 1-phosphate

(S)-propane-1,2-diol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-18:1-2-18:1-phosphatidylethanolamine

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

1-(β-D ribofuranosyl)nicotinamide

isoprimeverose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

maltotetraose

sucrose

allolactose

α-lactose

colanic acid

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

β-L-fucopyranose

α-L-fucopyranose

keto-D-fructose

β-D-fructofuranose

L-fuculose

D-xylulose

3-dehydro-D-glucopyranose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-allulose 6-phosphate

D-fructose 6-phosphate

aldehydo-D-allose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

D-altronate

guanosine 3'-monophosphate

adenosine 3'-monophosphate

5'-deoxyadenosine

cyclic-AMP

adenylo-succinate

pppGpp

ppGpp

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide