an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-phenylethanol

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

porphobilinogen

H₂O

5-aminolevulinate

phosphoenolpyruvate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

CO₂

prephenate

S-formylglutathione

α-D-glucosamine 1-phosphate

succinate semialdehyde

2-dehydropantoate

cyanate

γ-L-glutamyl 5-phosphate

glycerone phosphate

formate

(4-hydroxyphenyl)acetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

orotidine 5'-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

carboxyphosphate

carbamoyl phosphate

selenophosphate

4'-phosphopantetheine

hydrogen peroxide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

thiamine diphosphate

thiamine phosphate

4-hydroxy-2-nonenal

isopentenyl diphosphate

oxaloacetate

3-deoxy-D-arabino-heptulosonate 7-phosphate

glycolate

ectoine

(2S)-4-acetamido-2-aminobutanoate

acetoacetate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

pinocembrin chalcone

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

quinolinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

tartronate semialdehyde

(2E)-2-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

4-methylgentisate

3-maleylpyruvate

4,5-dihydroxyphthalate

(2S)-2-isopropylmalate

3-deoxy-α-D-manno-2-octulosonate

lipid IV_A

lipid A disaccharide (E. coli)

N-carbamoylputrescine

N⁵-carboxyaminoimidazole ribonucleotide

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-4-amino-5-oxopentanoate

2-phosphoglycolate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

2-iminoacetate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

citrate

N²-succinylglutamate

5-oxo-L-proline

ε-caprolactone

cyclohexanone

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(indol-3-yl)pyruvate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2,3-didehydroadipyl-CoA

2-maleylacetate

ethanolamine

coproporphyrinogen III

β-D-ribosylnicotinate

dethiobiotin

8-amino-7-oxononanoate

pimeloyl-CoA

7,8-diaminopelargonate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

isoquinolin-2(1H)-one

isoquinoline

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

5-phospho-β-D-ribosylamine

N-(5-phosphoribosyl)-anthranilate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-methylmalate

citraconate

oxalosuccinate

7-carboxy-7-deazaguanine

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

shikimate

3-dehydroquinate

5-guanidino-2-oxopentanoate

3-phosphooxypyruvate

O-ureido-L-homoserine

DNA without lesion

preuroporphyrinogen

L-canavanine

canavaninosuccinate

L-arginino-succinate

L-gulono-1,4-lactone

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(S)-dihydroorotate

dihydrogeranylgeranyl diphosphate

tetrahydrogeranylgeranyl diphosphate

3-dehydroshikimate

propanoyl phosphate

4-amino-4-deoxychorismate

lipid X

(R)-4'-phosphopantothenate

(R)-pantothenate

carbonic acid

S-methyl-5-thio-α-D-ribose 1-phosphate

2,5-dioxopentanoate

dihydroxyacetone

anthranilate

N-acetylglutamyl-phosphate

(R)-4-phosphopantoate

coniferaldehyde

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

D-galacto-hexodialdose

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

N-acetyl-L-glutamate 5-semialdehyde

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

urea-1-carboxylate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinyl-L-glutamate 5-semialdehyde

D-erythro-imidazole-glycerol-phosphate

hydroxypyruvate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

xanthine

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-2,3,4,5-tetrahydrodipicolinate

L-β-lysine

formamide

betaine aldehyde

4-aminobutanoate

3-oxopropanoate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

N-ethylsuccinimide

N-ethylmaleimide

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

cis,cis-muconate

(+)-muconolactone

muconolactone

3-methylmuconolactone

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

urea

O-acetyl-L-serine

3-deoxy-D-glycero-2,5-hexodiulosonate

2-dehydro-3-deoxy-D-gluconate

glutathione disulfide

2-protocatechuoylphloroglucinolcarboxylate

methylsalicylate

salicyl alcohol

(S)-2-amino-6-oxohexanoate

β-D-fructose 2,6-bisphosphate

N-ethylammeline

deethylsimazine

(R)-1-amino-2-propanol O-2-phosphate

dialurate

N-ethylammelide

mercuriphenyl acetate

hydrogen selenide

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(3-hydroxyphenyl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

2-amino-3-carboxymuconate-6-semialdehyde

(S)-ureidoglycolate

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

(4S)-4-hydroxy-2-oxoheptanedioate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

5-amino-6-(5-phospho-D-ribitylamino)uracil

autoinducer 2

S-ribosyl-L-homocysteine

5-(hydroxymethyl)-2-methylphenol

3-hydroxy-4-methylbenzaldehyde

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

glutathioselenol

selenodiglutathione

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

L-α-amino-ε-keto-pimelate

carbamate

L-citrulline

L-cysteine

L-methionine

L-glutamate

L-leucine

L-isoleucine

L-valine

L-tyrosine

L-tryptophan

L-glutamine

L-histidine

L-proline

glycine

L-serine

L-alanine

L-aspartate

L-phenylalanine

L-asparagine

L-lysine

L-arginine

L-threonine

hypoglycin A

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-ornithine

L-homocysteine

O-succinyl-L-homoserine

L-aspartate 4-semialdehyde

L-canaline

L-homoserine

O-phospho-L-homoserine

L-cystine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-aspartyl-4-phosphate

iminoarginine

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-threonine 3-O-phosphate

3-phospho-L-serine

L,L-diaminopimelate

L-2,4-diaminobutanoate

D-alanine

D-glutamate

D-arginine

D-aspartate

D-proline

β-alanine

(R)-β-lysine

(S)-3-amino-2-methylpropanoate

protocatechuate

trans-cinnamate

salicylate

2,3-dihydroxybenzoate

4-aminobenzoate

benzoate

3-hydroxy-5-methyl-benzoate

3-hydroxy-4-methyl-benzoate

(R)-pantoate

orotate

5-chloro-5-deoxy-D-ribonate

gentisate

acetate

D-gluconate

allantoate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

pristanate

palmitate

stearate

decanoate

octanoate

laurate

7-hydroxylaurate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

4-hydroxybutanoate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxoglutarate

pyruvate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

(3E)-2-oxohex-3-enedioate

chorismate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

α,ω-9Z-octadecenedioate

succinate

fumarate

maleate

(S)-malate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

4-O-phospho-α-Kdo8N-(2→6)-lipid IV_A

α-Kdo8N-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

phytyl diphosphate

all-trans-retinyl palmitate

all-trans-retinol

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

ferrichrome

iron(III) dicitrate

betanidin quinone

betanidin

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

geranylgeranyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannuronate

GDP-α-D-mannose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

keto-D-fructose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

hydroquinone

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3,4-dihydroxyphenylacetate

catechol

3-methylcatechol

4-methylcatechol

3-sulfocatechol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

1-octanol

ethanol

methanol

methylglyoxal

1-octanal

acetaldehyde

formaldehyde

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

menadione

caldariellaquinone

diacetyl

4-hydroxyacetophenone

4-hydroxybenzoate

urate

7,8-dihydro-8-oxoguanine

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

ferulate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

quercetin

6,7-dehydrobaicalein

baicalein

(2S)-pinocembrin

(2S)-liquiritigenin

(2S)-naringenin

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-7

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-10

ubiquinol-9

ubiquinol-7

phenol

3,5-xylenol

3-(hydroxymethyl)-5-methylphenol

3-hydroxy-5-methylbenzaldehyde

2,5-xylenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

guanine

adenine

AMP

GMP

IMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dADP

dGDP

dIDP

dATP

dGTP

dITP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

7,8-dihydrolumazine

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-6-lactoyl-5,6,7,8-tetrahydropterin

tetrahydromethanopterin

5,6,7,8-tetrahydromonapterin

7,8-dihydromonapterin triphosphate

7,8-dihydroneopterin 3'-triphosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

FMNH₂

reduced riboflavin

FADH₂

FAD

FMN

riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

preQ₁

isoguanine

UTP

CTP

dUTP

dCTP

UDP

dCDP

dCMP

CDP

dTMP

dUMP

dTTP

dTDP

dUDP

CMP

UMP

cytidine

uridine

adenosylcobalamin

cobyrinate

precorrin-2

precorrin-1

coenzyme A

8-oxo-GTP

8-oxo-dGTP

5'-deoxyadenosine

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

pppGpp

1-(5-phospho-β-D-ribosyl)-AMP

ppGpp

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

2-hydroxy-dATP

5-hydroxy-CMP

5-hydroxy-CTP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

cob(I)alamin

ethene

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3'-dephospho-CoA

malonyl-CoA

phenylacetyl-CoA

(3S)-hydroxyadipyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

isobutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

16-hydroxypalmitoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

hexadecanedioyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

methanethiol

S-sulfanylglutathione

agmatine

putrescine

spermidine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

hydrogensulfite

sulfate

nitrate

hydrogencarbonate

selenate

sulfite

selenide

OH^-

selenite

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Mo²⁺

Co²⁺

Cu²⁺

Fe²⁺

Hg²⁺

ammonium

H⁺

2-chloroacetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-D-glycerate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

Hg⁰

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

hemin

protoheme

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobinamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

cob(I)inamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal