an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-amino-4-deoxychorismate

H₂O

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

CO₂

oxalosuccinate

butanoyl phosphate

coproporphyrinogen III

glycerone phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

hydrogen peroxide

2-C-methyl-D-erythritol 4-phosphate

phosphoenolpyruvate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

1,4-dihydroxy-2-naphthoate

γ-L-glutamyl 5-phosphate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

quercitrin

3-dehydroshikimate

3-dehydroquinate

3-phosphooxypyruvate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-iminoacetate

carbon monoxide

formate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

12-α-hydroxy-3 oxochola-4,6-dienoate

7-α,12-α-dihydroxy-3-oxochol-4-enoate

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

carboxyphosphate

carbamoyl phosphate

3-deoxy-α-D-manno-2-octulosonate

anthranilate

N-(5-phosphoribosyl)-anthranilate

(R)-1-amino-2-propanol O-2-phosphate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

4-methyl-2-oxopentanoate

urea

L-canavanine

isopentenyl diphosphate

prenyl diphosphate

7-carboxy-7-deazaguanine

orotidine 5'-phosphate

α-D-glucosamine 1-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

oxaloacetate

dethiobiotin

5-phospho-β-D-ribosylamine

3'-phosphoadenylyl-sulfate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

hydroxypyruvate

DNA without lesion

prephenate

L-selenocystathionine

(S)-2-amino-6-oxohexanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

shikimate

(R)-pantothenate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-didehydro-D-gluconate

2-keto-D-gluconate

carbonic acid

lipid A disaccharide (E. coli)

lipid X

xanthine

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

D-erythro-imidazole-glycerol-phosphate

glycolate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

quinolinate

2-dehydropantoate

5-amino-6-(D-ribitylamino)uracil

norspermidine

carboxynorspermidine

(R)-4'-phosphopantothenate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

4-chloro-2-methyl-cis,cis-muconate

4-methylmuconolactone

2-chloro-4-methyl-cis,cis-muconate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

5-enolpyruvoyl-shikimate 3-phosphate

(S)-dihydroorotate

citrate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

2-maleylacetate

2-phosphoglycolate

1-deoxy-L-glycero-tetrulose 4-phosphate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

2-isopropylmaleate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

thiamine diphosphate

lipid IV_A

O-acetyl-L-serine

5-dehydro-D-gluconate

shikimate 3-phosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

luteolin 7-O-β-D-glucuronide

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

chloramphenicol

4'-phosphopantetheine

autoinducer 2

S-ribosyl-L-homocysteine

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

(R)-4'-phosphopantothenoyl-L-cysteine

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

acetyl phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

β-D-ribosylnicotinate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

acetoacetate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

glutathione disulfide

hydrogen selenide

glutathioselenol

selenodiglutathione

N-acetyl-D-muramate 6-phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

2-amino-3-carboxymuconate-6-semialdehyde

N⁵-carboxyaminoimidazole ribonucleotide

2-keto-L-gulonate

1-piperideine 6-carboxylate

aminoacetone

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-citrulline

L-cysteine

L-methionine

L-glutamate

L-glutamine

L-aspartate

L-proline

L-asparagine

L-alanine

L-lysine

L-tryptophan

L-serine

L-valine

L-leucine

L-isoleucine

L-arginine

glycine

L-phenylalanine

L-threonine

L-histidine

L-tyrosine

L-homocysteine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

L-canaline

L-ornithine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

meso-diaminopimelate

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-saccharopine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-threonine 3-O-phosphate

3-phospho-L-serine

L-cystathionine

L,L-diaminopimelate

D-alanine

D-glutamate

β-alanine

protocatechuate

4-aminobenzoate

D-mannonate

acetate

5-chloro-5-deoxy-D-ribonate

(R)-pantoate

D-gluconate

orotate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

D-tagaturonate

aldehydo-D-galacturonate

β-D-glucuronate

pristanate

butanoate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

(R)-lactate

(R)-glycerate

propanoate

2-oxoglutarate

pyruvate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

3-methyl-cis,cis-muconate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

7-α-hydroxy-O-carbamoyl-deacetylcephalosporin C

O-carbamoyl-deacetylcephalosporin C

deacetylcephalosporin C

cephamycin C

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

α-Kdo-(2→6)-lipid IV_A

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

D-altronate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

p-nitrophenyl-α-L-rhamnopyranoside

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

D-ribulose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-L-rhamnopyranose

α-L-rhamnopyranose

α-L-fucopyranose

β-L-fucopyranose

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

α-D-xylopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-D-ribofuranose

glycolaldehyde

keto-D-fructose

L-fuculose

3,6-anhydro-α-L-galactopyranose

3,6-anhydro-L-galactofuranose

keto-L-rhamnulose

keto-L-sorbose

D-ribulose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

L-iditol

D-sorbitol

sucrose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

isoprimeverose

maltopentaose

maltohexaose

maltotriose

maltotetraose

maltoheptaose

agarotriose

agaropentaose

neoagarohexaose

neoagarotetraose

neoagarobiose

stachyose

unsaturated gellan tetrasaccharide

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

4,5-dichlorobenzene-1,2-diol

4,6-dichloro-3-methylcatechol

3,6-dichloro-4-methylcatechol

5-chloro-3-methylcatechol

3,4-dichloro-6-methylcatechol

(S)-propane-1,2-diol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

ethanol

butan-1-ol

methanol

methylglyoxal

(S)-lactaldehyde

acetaldehyde

formaldehyde

butan-1-al

caldariellaquinone

diacetyl

4-hydroxybenzoate

urate

quercetin

luteolin

quercetin-3-glucoside

rutin

hesperidin

hesperitin-7-O-β-D-glucoside

prunin

naringin

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

2,5-dichlorotoluene

(1R,2S)-3,6-dichloro-4-methylcyclohexa-3,5-diene-1,2-diol

3,4-dichlorotoluene

(1R,2S)-3,4-dichloro-6-methylcyclohexa-3,5-diene-1,2-diol

4-nitrophenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

guanine

adenine

AMP

GMP

IMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dADP

dGDP

dIDP

dGTP

dATP

dITP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

tetrahydromethanopterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

bis(guanylyl molybdopterin) cofactor

bis(molybdenum cofactor)

adenylyl molybdenum cofactor

FMNH₂

reduced riboflavin

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

preQ₁

isoguanine

CTP

dCTP

UTP

dUTP

UDP

dCDP

CDP

dUDP

dTTP

dTDP

dCMP

dTMP

dUMP

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

UMP

CMP

cytidine

uridine

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosylcobalamin

cobyrinate

precorrin-2

precorrin-1

coenzyme A

5'-deoxyadenosine

adenylo-succinate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

5'-deoxy-5'-fluoroadenosine

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

cob(I)alamin

phenylacetate

testosterone

17-β-hydroxy-5-α-androstan-3-one

progesterone

cholest-4-en-3-one

coprostanone

cortisone

4,5α-dihydrocortisone

5-α-pregnane-3,20-dione

cholate

glycocholate

isobutanoyl-CoA

acetyl-CoA

3'-dephospho-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

malonyl-CoA

succinyl-CoA

phenylacetyl-CoA

4-hydroxybenzoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

18-hydroxylinoleoyl-CoA

phytenoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(+)-2-chloromuconolactone

(+)-5-chloromuconolactone

2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

2-chloro-4-methyl-cis-dienelactone

2,5-dichloro-3-methyl-muconolactone

3,6-dichloro-3a-methyl-dihydro-3H-furo[3,2-b]furan-2,5-dione

3,5-dichloro-2-methyl-muconolactone

5-chloro-3-methyl-cis-dienelactone

2,5-dichloro-4-methyl-muconolactone

trans-dienelactone

cis-dienelactone

5-chloro-trans-dienelactone

3-chloro-2-methyl-dienelactone

2-chloro-5-methyl-dienelactone

2-chloro-3-methyl-dienelactone

2-methyl-cis-dienelactone

2-methyl-trans-dienelactone

5-chloro-2-methyl-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

methanethiol

S-sulfanylglutathione

spermidine

putrescine

cadaverine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

superoxide

hydroxyl radical

sulfate

sulfite

thiosulfate

hydrogencarbonate

selenate

selenite

OH^-

hydrogensulfite

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Zn²⁺

Mo²⁺

Mg²⁺

Fe²⁺

ammonium

H⁺

2-chloroacetate

2-chloro-cis,cis-muconate

2,3-dichloro-5-methyl-muconate

2-chloro-2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

3,5-dichloro-2-methyl-muconate

2-(2,4-dichloro-5-oxofuran-2-yl)propanoate

2,5-dichloro-3-methyl-muconate

2,3-dichloro-cis,cis-muconate

2-chloro-2-(2-chloro-5-oxofuran-2-yl)acetate

3-chloro-cis,cis-muconate

5-chloromaleylacetate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

2-chloro-3-methyl-maleylacetate

5-chloro-2-methyl-maleylacetate

chloramphenicol 3-acetate

hydrogen cyanide

preQ₀

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

ω-saturated C55 dolichol phosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

protoporphyrinogen IX

Mg-protoporphyrin

protoporphyrin IX

uroporphyrinogen-III

protoheme

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

DNA with lesion