an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

L-canavanine

canavaninosuccinate

L-arginino-succinate

preuroporphyrinogen

3-dehydroshikimate

3-dehydroquinate

orotidine 5'-phosphate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

lipid IV_A

carbamoyl phosphate

carbonic acid

DNA without lesion

(R)-4'-phosphopantothenate

(R)-pantothenate

thiamine phosphate

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

γ-L-glutamyl 5-phosphate

5'-phosphoguanylyl(3'→5')guanosine

α-ribazole

α-ribazole 5'-phosphate

carboxyphosphate

2-dehydropantoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

(R)-4-phosphopantoate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

2-C-methyl-D-erythritol 4-phosphate

lipid A disaccharide (E. coli)

lipid X

2-aminoacetaldehyde

4-methyl-2-oxopentanoate

hydrogen peroxide

ethanolamine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

urocanate

oxalosuccinate

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

shikimate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

O-acetyl-L-serine

3-deoxy-D-manno-octulosonate 8-phosphate

histidinol

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

autoinducer 2

S-ribosyl-L-homocysteine

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

6-amino-2-oxohexanoate

ethylamine

N-ethylglycine

methylamine

5-dehydro-4-deoxy-D-glucarate

(R)-mandelate

(S)-mandelate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

xanthine

acetyl phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

creatinine

D-gluconate 6-phosphate

citrate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

nicotinate adenine dinucleotide

selenophosphate

D-erythro-imidazole-glycerol-phosphate

4'-phosphopantetheine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

quinolinate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-maleylacetate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

2-phosphoglycolate

(2S)-2-isopropylmalate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

methylsalicylate

salicyl alcohol

hydroxylamine

ammonia

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

N⁵-carboxyaminoimidazole ribonucleotide

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

anthranilate

N-(5-phosphoribosyl)-anthranilate

H₂

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

5,6-dimethylbenzimidazole

(R)-1-amino-2-propanol O-2-phosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

(2R,3S)-3-methylmalate

citraconate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(indol-3-yl)pyruvate

5-amino-6-(D-ribitylamino)uracil

7-carboxy-7-deazaguanine

ectoine

(2S)-4-acetamido-2-aminobutanoate

glutathione disulfide

hydroxypyruvate

(S)-dihydroorotate

histidinal

propanoyl phosphate

3-deoxy-α-D-manno-2-octulosonate

N-carbamoylputrescine

2-dehydro-3-deoxy-D-gluconate

phenylglyoxylate

2-(4-hydroxyphenyl)-2-oxoacetate

thiamine diphosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

4-hydroxybenzaldehyde

homogentisate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-maleyl-acetoacetate

(2S)-2-isopropyl-3-oxosuccinate

hydrogen selenide

glutathioselenol

selenodiglutathione

oxamate

N-carbamoyl-2-oxoglycine

(S)-ureidoglycolate

pyruvic oxime

(L-seryl)adenylate

1,4-dihydroxy-2-naphthoyl-CoA

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

(2,3-dihydroxybenzoyl)adenylate

4-oxoglutaramate

5-aminopentanoate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

1-piperideine-2-carboxylate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

H₂O

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

CO₂

α-D-glucosamine 1-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

oxaloacetate

L-histidinol phosphate

imidazole acetol-phosphate

porphobilinogen

S-formylglutathione

5-enolpyruvoyl-shikimate 3-phosphate

4-amino-4-deoxychorismate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

phosphoenolpyruvate

shikimate 3-phosphate

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

4-imidazolone-5-propanoate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

6-aminohexanoate

6-aminohexanoate linear dimer

2,5-dioxopentanoate

acetoacetate

4-fumaryl-acetoacetate

urea

4-(γ-L-glutamylamino)butanoate

4-(γ-L-glutamylamino)butanal

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

glycolate

5-(methylsulfanyl)-α-D-ribose

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

5-methylcytosine

glycerone phosphate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

1,4-dihydroxy-2-naphthoate

γ-glutamyl-L-putrescine

N-ethylsuccinimide

N-ethylmaleimide

5-oxo-L-proline

5-guanidino-2-oxopentanoate

hypotaurine

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

urea-1-carboxylate

pimeloyl-CoA

pimelate

γ-butyrobetaine

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

3-phosphooxypyruvate

4-hydroxy-2-nonenal

coproporphyrinogen III

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-α-amino-ε-keto-pimelate

L-citrulline

L-arginine

glycine

L-tyrosine

L-valine

L-leucine

L-histidine

L-serine

L-asparagine

L-cysteine

L-methionine

L-glutamate

L-glutamine

L-alanine

L-proline

L-aspartate

L-lysine

L-tryptophan

L-isoleucine

L-threonine

L-phenylalanine

L-homoserine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

hypoglycin A

L-canaline

L-cystine

O-succinyl-L-homoserine

S-adenosyl-L-methionine

L-homocysteine

L-glutamate-5-semialdehyde

L-ornithine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-aspartyl-4-phosphate

iminoarginine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

cis-4-hydroxy-D-proline

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

S-methyl-L-methionine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-2,4-diaminobutanoate

L-isoglutamine

L,L-diaminopimelate

D-lysine

D-aspartate

D-glutamate

D-proline

D-arginine

D-alanine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

salicylate

protocatechuate

2,3-dihydroxybenzoate

benzoate

4-aminobenzoate

acetate

orotate

(R)-pantoate

D-gluconate

D-mannonate

5-deoxy-D-glucuronate

5-chloro-5-deoxy-D-ribonate

allantoate

L-carnitine

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

pristanate

palmitate

pentanoate

butanoate

stearate

decanoate

laurate

7-hydroxylaurate

octanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

phytenate

(15Z)-tetracosenoate

oleate

linoleate

α-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(2R,3S)-2-methylisocitrate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

pyruvate

formate

propanoate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxobutanoate

glyoxylate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

3-oxoadipate

cis-aconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

(3E)-2-oxohex-3-enedioate

chorismate

α,ω-9Z-octadecenedioate

D-galactarate

D-glucarate

succinate

fumarate

(S)-malate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

4-O-phospho-α-Kdo8N-(2→6)-lipid IV_A

α-Kdo8N-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

all-trans-retinyl palmitate

all-trans-retinol

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

ferrichrome

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

D-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

D-erythrose 4-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-ribopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-L-arabinopyranose

glycolaldehyde

L-glyceraldehyde

keto-D-fructose

keto-L-sorbose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

L-iditol

D-sorbitol

D-mannitol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

scyllo-inositol

1D-chiro-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 4-monophosphate

ethanol

propan-1-ol

butan-1-ol

phytol

methanol

methylglyoxal

benzaldehyde

phytenal

formaldehyde

1-propanal

butan-1-al

acetaldehyde

caldariellaquinone

diacetyl

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

quercetin

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-7

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-10

ubiquinol-9

ubiquinol-7

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

adenine

guanine

adenosine

inosine

guanosine

xanthosine

2'-deoxyguanosine

2'-deoxyinosine

2'-deoxyadenosine

dGDP

dIDP

dADP

dGTP

dITP

dATP

dAMP

dGMP

ATP

GTP

ITP

ADP

GDP

IDP

GMP

XMP

AMP

IMP

hypoxanthine

7,8-dihydrolumazine

tetrahydromethanopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

5,6,7,8-tetrahydromonapterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin triphosphate

7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

cyclic pyranopterin phosphate

molybdopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin adenine dinucleotide

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

FMNH₂

reduced riboflavin

FADH₂

riboflavin

FAD

FMN

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

cytosine

preQ₁

isoguanine

dUMP

dCMP

dTMP

dUTP

dUDP

CTP

CDP

dCTP

dCDP

UTP

UDP

dTTP

dTDP

cytidine

uridine

2'-deoxyuridine

2'-deoxycytidine

thymidine

UMP

CMP

5-fluorouracil

cob(I)alamin

adenosylcobalamin

cobyrinate

precorrin-2

precorrin-1

precorrin-3B

precorrin-3A

precorrin-8x

precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-6B

precorrin-7

precorrin-6B

precorrin-5

precorrin-6A

coenzyme A

ppGpp

pppGpp

5'-deoxyadenosine

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

8-oxo-GTP

8-oxo-dGTP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

isobutanoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylbutanoyl-CoA

malonyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

octanoyl-CoA

lauroyl-CoA

pentanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-dienelactone

cis-dienelactone

D-galactono-1,4-lactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

2-sulfinoacetaldehyde

sulfoacetaldehyde

taurine

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

betaine aldehyde

agmatine

spermine

putrescine

spermidine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

sulfite

selenide

selenate

nitrite

nitrate

thiosulfate

selenite

OH^-

hydrogensulfite

sulfate

hydrogencarbonate

molybdate

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

Fe²⁺

Mg²⁺

Co²⁺

Ni²⁺

Mo²⁺

Zn²⁺

ammonium

H⁺

2-chloroacetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

hydrogen cyanide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-D-glycerate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminosuccinate

2-iminobutanoate

hydrogen sulfide

oxygen

protoporphyrinogen IX

protoporphyrin IX

Mg-protoporphyrin

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoheme

adenosylcobalamin 5'-phosphate

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide-GDP

cob(I)inamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal