an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(indol-3-yl)pyruvate

hydrogenobyrinate a,c-diamide

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

4-hydroxy-2-nonenal

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

2-maleylacetate

6-chlorohydroxyquinol

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

DNA without lesion

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

2-dehydro-3-deoxy-D-gluconate

2-aminomalonate semialdehyde

N,N-dimethyl-1,4-phenylenediamine

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

glutathione disulfide

porphobilinogen

5-aminolevulinate

histidinol

(2-hydroxyphenyl)acetate

creatinine

cis,cis-muconate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

muconolactone

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

12α-hydroxy-3-oxocholan-24-oyl-CoA

deoxycholoyl-CoA

allopregnanolone

3-oxocholoyl-CoA

2-pyrone-4,6-dicarboxylate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

5-guanidino-2-oxopentanoate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-methylmalate

citraconate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

carbonic acid

N-ethylammeline

deethylsimazine

2-phosphoglycolate

L-gulono-1,4-lactone

β-D-ribosylnicotinate

ethanolamine

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

propanoyl phosphate

lipid IV_A

lipid A disaccharide (E. coli)

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

4-methyl-3-oxoadipate

N²-succinylglutamate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

O-acetyl-L-serine

6-amino-2-oxohexanoate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(S)-4-amino-5-oxopentanoate

nicotinate adenine dinucleotide

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

4'-phosphopantetheine

lipid X

(R)-3-(phenyl)lactoyl-CoA

4-methylsalicylate

5-methylsalicylate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

7-carboxy-7-deazaguanine

4-fumaryl-acetoacetate

N²-succinyl-L-glutamate 5-semialdehyde

6-phospho D-glucono-1,5-lactone

carbon monoxide

(S)-2,3,4,5-tetrahydrodipicolinate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-2,3-dihydrodipicolinate

methylsalicylate

salicyl alcohol

acetyl phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

histidinal

N⁵-carboxyaminoimidazole ribonucleotide

6-aminohexanoate

6-aminohexanoate linear dimer

3-phosphooxypyruvate

(R)-4-phosphopantoate

4-(γ-L-glutamylamino)butanoate

4-(γ-L-glutamylamino)butanal

coniferaldehyde

3-mercaptopyruvate

2-iminoacetate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

dethiobiotin

pimeloyl-CoA

(lipoyl)adenylate

N-acetyl-D-muramate 6-phosphate

3-dehydroquinate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

D-glycero-β-D-manno-heptose 1-phosphate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

dialurate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

2-amino-3-carboxymuconate-6-semialdehyde

hydrogen selenide

glutathioselenol

selenodiglutathione

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(3-hydroxyphenyl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

autoinducer 2

S-ribosyl-L-homocysteine

2-oxoglutaramate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

N-ethylammelide

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

itaconate

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

2,6-dioxo-6-phenylhexa-3-enoate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-keto-L-gulonate

isopropylamine

4-oxoglutaramate

5-aminopentanoate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

1-piperideine-2-carboxylate

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

CO₂

H₂O

tartronate semialdehyde

(S)-ureidoglycolate

urea

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

phosphoenolpyruvate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

5-dehydro-4-deoxy-D-glucarate

hydroxypyruvate

glycolate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

5-dehydro-D-gluconate

oxaloacetate

selenophosphate

ethylamine

N-isopropylammelide

hydroxyatrazine

5-phospho-β-D-ribosylamine

N-(5-phosphoribosyl)-anthranilate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

3-dehydroshikimate

shikimate

shikimate 3-phosphate

prephenate

L-histidinol phosphate

imidazole acetol-phosphate

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

citrate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-deoxy-α-D-manno-2-octulosonate

4-amino-4-deoxychorismate

(R)-1-amino-2-propanol O-2-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

(S)-dihydroorotate

glycerone phosphate

3-oxopropanoate

quinolinate

β-nicotinate D-ribonucleotide

γ-L-glutamyl 5-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

(R)-4'-phosphopantothenate

(R)-pantothenate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

acetoacetate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

2-dehydropantoate

5-methylcytosine

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

N-acetyl-L-glutamate 5-semialdehyde

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

carbamoyl phosphate

hydrogen peroxide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

S-formylglutathione

2-C-methyl-D-erythritol 4-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

isopentenyl diphosphate

4-maleyl-acetoacetate

homogentisate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

α-D-glucosamine 1-phosphate

coproporphyrinogen III

2-aminoacetaldehyde

orotidine 5'-phosphate

N-acetylglutamyl-phosphate

xanthine

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

anthranilate

N¹-(5-phospho-β-D-ribosyl)glycinamide

hydrogenobyrinate

prenyl diphosphate

4-methyl-2-oxopentanoate

urocanate

4-imidazolone-5-propanoate

D-erythro-imidazole-glycerol-phosphate

formamide

succinate semialdehyde

N-carbamoylputrescine

preuroporphyrinogen

4-aminobutanoate

2,5-dioxopentanoate

carboxyphosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

S-adenosyl 3-(methylsulfanyl)propylamine

urea-1-carboxylate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

carbamate

L-citrulline

L-lysine

L-cysteine

L-methionine

L-tyrosine

L-phenylalanine

L-threonine

L-glutamate

L-aspartate

L-alanine

L-glutamine

L-proline

L-histidine

L-tryptophan

L-isoleucine

L-leucine

L-arginine

glycine

L-asparagine

L-serine

L-valine

hypoglycin A

1-aminocyclopropane-1-carboxylate

O-succinyl-L-homoserine

L-canaline

L-glutamate-5-semialdehyde

L-cystine

L-homocysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-ornithine

O-phospho-L-homoserine

L-homoserine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenocysteine

meso-diaminopimelate

iminoarginine

2-hydroxy-5-oxoproline

L-aspartyl-4-phosphate

N-methyl-L-proline

D-proline betaine

L-proline betaine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

cis-4-hydroxy-D-proline

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

L-threonine 3-O-phosphate

3-phospho-L-serine

L-isoglutamine

L,L-diaminopimelate

D-arginine

D-lysine

D-alanine

D-glutamate

D-serine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

trans-cinnamate

salicylate

2,3-dihydroxybenzoate

protocatechuate

5-chloroprotocatechuate

benzoate

4-aminobenzoate

acetate

5-chloro-5-deoxy-D-ribonate

allantoate

D-gluconate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

pristanate

palmitate

stearate

decanoate

octanoate

laurate

7-hydroxylaurate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

pyruvate

formate

propanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

α,ω-9Z-octadecenedioate

D-galactarate

D-glucarate

fumarate

succinate

(S)-malate

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(S)-(+)-allantoin

6-caprolactam

6-aminopenicillanate

penicillin G

isopenicillin N

acetamide

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

all-trans-retinyl palmitate

all-trans-retinol

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

L-gulonate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

4-phospho-D-erythronate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribopyranose

α-D-xylopyranose

β-D-glucopyranose

α-D-glucopyranose

β-D-allopyranose

β-D-allofuranose

D-glyceraldehyde

α-L-arabinopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

glycolaldehyde

keto-D-fructose

3,6-anhydro-α-L-galactopyranose

3,6-anhydro-L-galactofuranose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

α,α-trehalose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

maltotriose

agarotriose

agaropentaose

neoagarohexaose

neoagarotetraose

neoagarobiose

3,5-cyclohexadiene-1,2-diol-1-carboxylate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

4-chlorocatechol

4-methylcatechol

biphenyl-2,3-diol

catechol

myo-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

ethanol

methanol

3-(N-morpholino)propanal

methylglyoxal

1-propanal

butan-1-al

formaldehyde

acetaldehyde

(R)-acetoin

(S)-acetoin

2,5-dichloro-p-quinone

menadione

caldariellaquinone

diacetyl

biphenyl

benzene

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

cyanuric acid

4-hydroxybenzoate

ferulate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

(+)-taxifolin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucodelphinidin

(2R,3S,4S)-leucopelargonidin

(+)-dihydromyricetin

(+)-dihydrokaempferol

2,5-dichloro-p-quinol

2,6-dichlorohydroquinone

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-7

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-10

ubiquinol-9

ubiquinol-7

aniline

5-chlorosalicylate

4-chlorosalicylate

2,4,6-trichlorophenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

atrazine

adenine

guanine

AMP

GMP

XMP

IMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dIDP

dADP

dGTP

dITP

dATP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyguanosine

7,8-dihydrolumazine

5,6,7,8-tetrahydromonapterin

tetrahydromethanopterin

(6R)-4a-hydroxy-tetrahydrobiopterin

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropterin

7,8-dihydromonapterin triphosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

reduced riboflavin

FADH₂

FMNH₂

riboflavin

FAD

FMN

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

cytosine

preQ₁

isoguanine

dCMP

dipicolinate

5,6-dihydrothymine

5,6-dihydrouracil

dTDP

dTMP

CTP

dUTP

dCTP

UTP

dUDP

CDP

dCDP

UDP

dTTP

dUMP

UMP

CMP

cytidine

uridine

5-fluorouracil

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

precorrin-5

precorrin-4

precorrin-3B

precorrin-7

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

precorrin-1

precorrin-3A

precorrin-2

precorrin-8x

precorrin-6A

precorrin-6B

(R)-lipoate

coenzyme A

pppGpp

ppGpp

cyclic-AMP

8-oxo-GTP

8-oxo-dGTP

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

thiamine

nicotinate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

androsterone

ethene

methyl (indol-3-yl)acetate

phenylacetate

(indol-3-yl)acetate

campest-4-en-3-one

(+)-7-epi-jasmonate

17-β-hydroxy-5-α-androstan-3-one

testosterone

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

cholest-dien-3-one

cholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

5-α-pregnane-3,20-dione

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

7α-hydroxy-5β-cholestan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

campest-4-en-3β-ol

5α-androstane-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

3-dehydrocholate

cholate

deoxycholate

isobutanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

choloyl-CoA

itaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

malonyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

octanoyl-CoA

lauroyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(3S)-citramalyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

methanethiol

thiocyanate

S-sulfanylglutathione

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

spermidine

putrescine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

molybdate

nitrate

selenate

selenite

OH^-

hydrogensulfite

sulfate

selenide

hydrogencarbonate

sulfite

thiosulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Mg²⁺

Co²⁺

Mo²⁺

Fe²⁺

Zn²⁺

Mn²⁺

Ni²⁺

ammonium

H⁺

K⁺

2-chloroacetate

2-chloromaleylacetate

3-chloro-cis,cis-muconate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

acrylonitrile

hydrogen cyanide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-3-(phenyl)lactate

(2R)-2,3-dihydroxy-3-methylbutanoate

4-dimethylaminophenylazobenzene

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

siroheme

hemin

protoheme

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal