an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-dehydroshikimate

H₂O

3-dehydroquinate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

carbamoyl phosphate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

tartronate semialdehyde

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

phosphoenolpyruvate

glycerone phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

histidinol

histidinal

5-oxo-L-proline

1-deoxy-L-glycero-tetrulose 4-phosphate

formate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

CO₂

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

urocanate

4-imidazolone-5-propanoate

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

urea

prenyl diphosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

6-phospho D-glucono-1,5-lactone

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

α-D-glucosamine 1-phosphate

(R)-4'-phosphopantothenate

(R)-pantothenate

hydrogen peroxide

coproporphyrinogen III

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

butanoyl phosphate

acetoacetate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

L-histidinol phosphate

prephenate

shikimate 3-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

2-dehydropantoate

3-methyl-2-oxobutanoate

oxaloacetate

L-selenocystathionine

3-deoxy-D-manno-octulosonate 8-phosphate

1-pyrroline

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

5-dehydro-D-gluconate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

β-nicotinate D-ribonucleotide

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

orotidine 5'-phosphate

(S)-dihydroorotate

carboxyphosphate

4'-phosphopantetheine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

S-adenosyl 3-(methylsulfanyl)propylamine

autoinducer 2

S-ribosyl-L-homocysteine

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

1,4-dihydroxy-2-naphthoyl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

anthranilate

N-(5-phosphoribosyl)-anthranilate

xanthine

citrate

5-(methylsulfanyl)-ribulose 1-phosphate

γ-L-glutamyl 5-phosphate

acetyl phosphate

oxalosuccinate

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

S-methyl-5'-thioadenosine

shikimate

nicotinate adenine dinucleotide

isopentenyl diphosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

D-gluconate 6-phosphate

O-ureido-L-homoserine

formamide

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

4-fumaryl-acetoacetate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

glycolate

5-dehydro-4-deoxy-D-glucarate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

ethanolamine

2-iminoacetate

DNA without lesion

hexulose 6-phosphate

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

2-keto-D-gluconate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

2,5-didehydro-D-gluconate

3'-phosphoadenylyl-sulfate

L-β-lysine

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

methylsalicylate

salicyl alcohol

(S)-2-amino-6-oxohexanoate

norspermidine

carboxynorspermidine

urea-1-carboxylate

L-dehydro-ascorbate

H₂

5-carboxymethyl-2-hydroxymuconate

(lipoyl)adenylate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

N-acetyl-D-muramate 6-phosphate

(indol-3-yl)pyruvate

(4-hydroxyphenyl)acetate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

α-D-galactosyl-diphosphoundecaprenol

betaine aldehyde

chloramphenicol

O-acetyl-L-serine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

(R)-mandelate

(S)-mandelate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

N-Formyl-L-kynurenine

4-amino-4-deoxychorismate

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

1,6-anhydro-N-acetyl-β-muramate

oxalate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

ethylamine

N-ethylglycine

methylamine

ε-caprolactone

cyclohexanone

3-hydroxyanthranilate

(S)-ureidoglycolate

4-methyl-3-oxoadipate

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

2-maleylacetate

carbonic acid

dihydrogeranylgeranyl diphosphate

tetrahydrogeranylgeranyl diphosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

cyclopentanone

cyclopentanol

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(R)-4'-phosphopantothenoyl-L-cysteine

N-acetylmuramoyl-L-ala-D-glu

N-acetylmuramoyl-L-ala-D-glu-(L)-meso-diaminopimelate -(L)-D-ala

(2R,3S)-3-methylmalate

citraconate

1,4-dihydroxy-2-naphthoate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

2,6-dioxo-6-phenylhexa-3-enoate

2-hydroxy-5-carboxymethylmuconate semialdehyde

selenophosphate

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

hop-22(29)-ene

squalene

(R)-1-amino-2-propanol O-2-phosphate

(S)-2,3-dihydrodipicolinate

aminoacetone

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2Z,2E)-2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate

(2Z,2E)-2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate

(2R,3S)-2,3-dimethylmalate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

propanoyl phosphate

3-ureidopropanoate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-amino-3-carboxymuconate-6-semialdehyde

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

propynoate

prop-2-ynal

palmitaldehyde

dimethylsulfoniopropanoate

4-imidazoleacetate

imidazole acetaldehyde

D-glucurono-6,3-lactone

3,4-dihydroxyphenylacetaldehyde

(2E)-hexadecenal

4-acetamidobutanoate

4-acetamidobutanal

2-oxoglutaramate

quinolinate

(2Z,4E)-2-aminomuconate

glutathione disulfide

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

2,2',3,3'-tetrahydroxybiphenyl

2,2',3-trihydroxybiphenyl

N-acetyl-L,L-2,6-diaminopimelate

5-amino-6-(5-phospho-D-ribosylamino)uracil

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

hydrogen selenide

2-keto-L-gulonate

2-dehydro-6-phospho-D-gluconate

N⁵-carboxyaminoimidazole ribonucleotide

2,5-dioxopentanoate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dihydrophloroglucinol

selenodiglutathione

5-amino-6-(5-phospho-D-ribitylamino)uracil

glutathioselenol

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

1-piperideine 6-carboxylate

picolinate

1,2-dihydro-β-NADP

cyclic-2,3-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

dehydroascorbate (bicyclic form)

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

bisorganyltrisulfane

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

meso-diaminopimeloyl-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-citrulline

L-aspartate

L-glutamate

L-glutamine

glycine

L-histidine

L-proline

L-lysine

L-asparagine

L-threonine

L-tyrosine

L-phenylalanine

L-alanine

L-serine

L-isoleucine

L-leucine

L-valine

L-tryptophan

L-arginine

L-cysteine

L-methionine

L-ornithine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-succinyl-L-homoserine

L-homoserine

L-homocysteine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-canaline

1-aminocyclopropane-1-carboxylate

hypoglycin A

meso-diaminopimelate

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

L-saccharopine

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

S-methyl-L-methionine

S-methyl-L-cysteine

sarcosine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-carbamoylglycine

L-2-acetamido-6-oxoheptanedioate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-cystathionine

L,L-diaminopimelate

S-trans-1-propenyl-L-cysteine

S-allyl-L-cysteine

L-isoglutamine

D-cysteine

D-alanine

D-serine

D-glutamate

β-alanine

(R)-β-lysine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

salicylate

2,3-dihydroxybenzoate

benzoate

4-aminobenzoate

acetate

(R)-pantoate

D-gluconate

orotate

5-chloro-5-deoxy-D-ribonate

allantoate

fluoroacetate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

aldehydo-D-galacturonate

7-hydroxylaurate

laurate

octanoate

decanoate

stearate

palmitate

butanoate

pentanoate

pristanate

linoleate

α-linolenate

oleate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(2E)-hexadecenoate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

phytenate

(15Z)-tetracosenoate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

(R)-glycerate

propanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-oxoadipate

cis-aconitate

cis-homoaconitate

(1R,2S)-homoisocitrate

(2R)-homocitrate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

(4S)-4-hydroxy-2-oxoglutarate

α,ω-9Z-octadecenedioate

D-glucarate

fumarate

succinate

(S)-malate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

acetamide

salicylaldehyde

phytyl diphosphate

all-trans-retinyl palmitate

all-trans-retinol

geranyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

betanidin quinone

betanidin

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,5E)-dodeca-2,5-dienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

L-idonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-D-ribofuranose

glycolaldehyde

keto-D-fructose

keto-L-sorbose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

L-iditol

D-sorbitol

sucrose

maltohexaose

maltopentaose

maltotriose

maltotetraose

maltoheptaose

raffinose

stachyose

3,4-dihydroxyphenylacetate

biphenyl-2,3-diol

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

myo-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

ethanol

methanol

fluoroacetaldehyde

methylglyoxal

benzaldehyde

(S)-lactaldehyde

formaldehyde

acetaldehyde

1-octanal

phytenal

dodecanal

decanal

2',4,4',6'-tetrahydroxychalcone

(R)-acetoin

menadione

caldariellaquinone

Reactive Blue 5

diacetyl

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

2-nitrobenzoate

2-hydroxylaminobenzoate

2,2'-dihydroxybiphenyl

6,7-dehydrobaicalein

baicalein

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

demethylmenaquinol-7

menaquinol-8

menaquinol-7

ubiquinol-8

4-nitrophenol

4-aminophenol

4-methylphenol

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

parathion

vanillyl mandelate

guanine

adenine

AMP

IMP

GMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dGMP

hypoxanthine

xanthosine

inosine

adenosine

guanosine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

7,8-dihydrolumazine

(6R)-4a-hydroxy-tetrahydrobiopterin

tetrahydromethanopterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

7,8-dihydroneopterin 3'-triphosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

preQ₁

isoguanine

CDP

dCDP

UDP

dUDP

dCMP

CTP

dTMP

dUMP

5,6-dihydrothymine

5,6-dihydrouracil

UTP

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

dTDP

dTTP

dCTP

dUTP

dipicolinate

UMP

CMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

hydantoin

sirohydrochlorin

precorrin-2

precorrin-1

coenzyme A

(R)-lipoate

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

ppGpp

pppGpp

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

5'-deoxy-5'-fluoroadenosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal

ethene

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

malonyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3'-dephospho-CoA

vinylacetyl-CoA

phenylacetyl-CoA

isobutanoyl-CoA

4-hydroxybenzoyl-CoA

3-methylglutaconyl-CoA

benzoyl-CoA

oxalyl-CoA

formyl-CoA

(2R)-ethylmalonyl-CoA

(2S)-ethylmalonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA

(2E,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(2E,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

palmitoleoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

pentanoyl-CoA

pristanoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

trans-dienelactone

cis-dienelactone

D-glucono-1,5-lactone

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

3-dimethylsulfoniopropionaldehyde

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

taurine

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

agmatine

putrescine

spermidine

4-aminobutanal

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

nitric oxide

superoxide

hydroxyl radical

nitrite

hydrogencarbonate

selenate

nitrate

sulfite

thiosulfate

selenide

sulfate

OH^-

selenite

hydrogensulfite

phosphate

diphosphate

chloride

Cr³⁺

Cr⁶⁺

Fe³⁺

Fe²⁺

Cd²⁺

Mg²⁺

H⁺

ammonium

2-chloroacetate

chloramphenicol 3-acetate

paraoxon

hydrogen cyanide

(indole-3-yl)acetonitrile

preQ₀

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

Mg-protoporphyrin

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

siroheme

protoheme

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion