ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C11543

H2O

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C11946

N-(5-phosphoribosyl)-anthranilate

C928

CO2

C1024

aminoacetone

C11479

phosphoenolpyruvate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C11794

3'-phosphoadenylyl-sulfate

C1283

4-maleyl-acetoacetate

C12171

homogentisate

C3262

3-methyl-2-oxobutanoate

C3417

(S)-3-methyl-2-oxopentanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11857

β-nicotinate D-ribonucleotide

C11800

(R)-pantothenate

C14924

carboxyphosphate

C2191

carbamoyl phosphate

C12176

histidinol

C12178

histidinal

C12044

L-histidinol phosphate

C12125

imidazole acetol-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C1415

3-hydroxyanthranilate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C13635

β-D-ribosylnicotinate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C1196

S-methyl-5'-thioadenosine

C15238

5-deoxy-α-ribose 1-phosphate

C12218

α-D-glucosamine 1-phosphate

C10349

glycerone phosphate

C6444

oxaloacetate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C11832

orotidine 5'-phosphate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C6361

acetoacetate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1268

(R)-4'-phosphopantothenate

C11802

4'-phosphopantetheine

C1538

2-C-methyl-D-erythritol 4-phosphate

C12364

isopentenyl diphosphate

C11874

N-succinyl-2-amino-6-ketopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C11639

succinate semialdehyde

C1321

4-aminobutanoate

C6349

3-oxopropanoate

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C12350

7,8-diaminopelargonate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C1130

8-amino-7-oxononanoate

C11930

N-acetylglutamyl-phosphate

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C12056

L-arginino-succinate

C1002

anthranilate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C891

citrate

C873

coproporphyrinogen III

C3656

D-gluconate 6-phosphate

C11767

porphobilinogen

C11826

oxalosuccinate

C4620

S-formylglutathione

C12212

glutarate

C13761

(7R)-7-(4-carboxybutanamido)cephalosporanate

C11483

glycolate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C1305

4-fumaryl-acetoacetate

C473

(2-hydroxyphenyl)acetate

C11895

N-Formyl-L-kynurenine

C3319

4-methyl-2-oxopentanoate

C7865

urea

C933

L-canavanine

C13950

pimeloyl-CoA

C12355

dethiobiotin

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C3259

2-oxovalerate

C506

3-ethylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C13793

(2R,3S)-3-methylmalate

C1491

citraconate

C15282

D-galactosamine-6-phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C12254

ethanolamine

C12162

hydrogen peroxide

C949

lipid X

C1528

2-dehydropantoate

C13627

DNA without lesion

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C14074

prenyl diphosphate

C13196

methyl-1,4-benzoquinol

C13197

2-methyl-1,4-benzoquinone

C11652

shikimate 3-phosphate

C11653

shikimate

C571

4-hydroxy-2-nonenal

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C13913

N-carbamoylputrescine

C1108

acetyl phosphate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C3850

5-amino-6-(D-ribitylamino)uracil

C3888

7-carboxy-7-deazaguanine

C2580

methylsalicylate

C15056

salicyl alcohol

C12139

preuroporphyrinogen

C12192

carbonic acid

C1431

3-dehydroshikimate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C10794

lipid A disaccharide (E. coli)

C11873

N-succinyl-L,L-2,6-diaminopimelate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C562

4-methyl-3-oxoadipate

C12584

N-(2,3-dihydroxybenzoyl)-L-serine trimer

C11950

N-(2,3-dihydroxybenzoyl)-L-serine

C15227

N-(2,3-dihydroxybenzoyl)-L-serine dimer

C10261

ADP-L-glycero-β-D-manno-heptose

C3684

3-deoxy-α-D-manno-2-octulosonate

C11760

prephenate

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C12369

3-dehydroquinate

C1407

3-hydroxypropanoate

C6099

lipid IVA

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C12848

N5-carboxyaminoimidazole ribonucleotide

C12048

γ-L-glutamyl 5-phosphate

C13649

N-ethylammeline

C13650

deethylsimazine

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C13909

CDP-glycerol

C12208

poly (glycerol phosphate)

C8333

(indol-3-yl)pyruvate

C3279

2-oxopent-4-enoate

C102

2,6-dioxo-6-phenylhexa-3-enoate

C3269

(S)-4-hydroxy-2-oxopentanoate

C893

cis,cis-muconate

C266

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

C2588

3-(2,3-dihydroxyphenyl)propanoate

C924

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

C2585

3-phenylpropanoate

C14185

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

C14181

2-maleylacetate

C1353

3-phosphooxypyruvate

C1078

(S)-2-amino-6-oxohexanoate

C191

L-selenocystathionine

C12016

(lipoyl)adenylate

C13854

hydrogen selenide

C13702

1-piperideine 6-carboxylate

C15200

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

C2541

3-(3-hydroxyphenyl)propanoate

C15311

muconolactone

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C12494

N-acetyl-D-muramate 6-phosphate

C13648

N-ethylammelide

C4674

glutathione disulfide

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C3338

2-oxoglutaramate

C12352

(S)-dihydroorotate

C4688

glutathioselenol

C4690

selenodiglutathione

C1271

4-oxoglutaramate

C11715

quinolinate

C9431

1,2-dihydro-β-NADP

C12274

enol-phenylpyruvate

C1010

ammonia

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C3355

(3E)-2-oxopent-3-enoate

C435

bisorganyltrisulfane

C12545

ethene

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C11480

phenylacetate

C6218

(+)-7-epi-jasmonate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C4520

(25S)-3-oxocholest-4-en-26-oate

C5298

acetyl-CoA

C5154

(3E)-tetradec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C5314

2-methylacetoacetyl-CoA

C4901

succinyl-CoA

C4913

malonyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C4922

isobutanoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5188

dihomo γ-linolenoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4937

3'-dephospho-CoA

C5306

3-methylcrotonyl-CoA

C4920

isovaleryl-CoA

C4899

3-methylglutaconyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5313

2-methylbutanoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C10760

4-methyl-3-oxoadipyl-CoA

C10758

3-oxoadipyl-CoA

C10762

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

C10757

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

C10759

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

C6075

3-oxooctadecanoyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C6562

hexadecanedioyl-CoA

C6568

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C480

18-hydroxystearoyl-CoA

C491

18-hydroxyoleoyl-CoA

C2873

pristanoyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C10623

phytanoyl-CoA

C11187

7-hydroxylauroyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C1177

propanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C7164

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

C7165

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C7356

(3R)-3-hydroxypentanoyl-CoA

C7343

(S)-malyl-CoA

C11400

phytenoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C5920

(R)-methylmalonyl-CoA

C10100

trans-dienelactone

C10102

cis-dienelactone

C3727

all-trans-retinyl palmitate

C4606

S-(hydroxymethyl)glutathione

C12293

3-sulfino-L-alanine

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C3998

methanethiol

C4644

S-sulfanylglutathione

C10301

agmatine

C3574

spermidine

C3548

putrescine

C3576

cadaverine

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C11222

sn-glycero-3-phosphoethanolamine

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C8958

superoxide

C8965

hydroxyl radical

C7014

sulfate

C7020

selenate

C7036

hydrogencarbonate

C7016

sulfite

C7025

OH-

C7057

molybdate

C7017

selenite

C7034

hydrogensulfite

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11009

Mg2+

C11023

Fe2+

C4328

ammonium

C4320

H+

C4318

K+

C11281

2-chloroacetate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C11510

5-chloro-5-deoxy-D-ribonate

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C13366

(indole-3-yl)acetonitrile

C13354

preQ0

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C6287

2-octaprenylphenol

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6755

(R)-citramalate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2822

ω-saturated C55 dolichol phosphate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C6723

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

C6599

2-iminobutanoate

C7121

oxygen

C7118

hydrogen sulfide

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7676

protoporphyrin IX

C6624

protoheme

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C9861

cobyrinate

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C803

ethylphosphate

C12247

L-homocysteine

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C1328

L-cysteinylglycine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C11520

hypoglycin B

C5032

carbamate

C3526

L-kynurenine

C3530

L-2-aminoadipate

C3536

L-α-amino-ε-keto-pimelate

C12201

L-2-amino-3-oxobutanoate

C12073

L-aspartyl-4-phosphate

C12063

seleno-L-homocysteine

C12165

2-hydroxy-5-oxoproline

C11955

O-acetyl-L-homoserine

C10821

trans-4-hydroxy-L-proline

C10823

3-hydroxy-L-kynurenine

C5478

N-formyl-L-glutamate

C5476

formyl-L-isoglutamine

C15000

N-acetyl-L-ornithine

C14988

N-acetyl-L-citrulline

C5466

N-formimino-L-glutamate

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C3402

3-phospho-L-serine

C5612

L-cysteine

C5583

L-methionine

C5597

L-alanine

C5575

L-tryptophan

C5579

L-serine

C5596

L-aspartate

C5577

L-threonine

C5607

L-glutamate

C5609

L-glutamine

C5603

L-isoleucine

C5605

L-histidine

C5642

L-arginine

C5573

L-tyrosine

C12231

L-ornithine

C5584

L-lysine

C5588

L-leucine

C5581

L-proline

C5595

L-cystathionine

C5571

L-valine

C5643

L-asparagine

C2469

L-phenylalanine

C5580

L,L-diaminopimelate

C5601

L-isoglutamine

C8799

D-alanine

C8797

D-glutamate

C12067

glycine

C11441

β-alanine

C12303

L-citrulline

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12261

hypoglycin A

C12233

L-glutamate-5-semialdehyde

C12227

O-succinyl-L-homoserine

C12237

L-canaline

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12245

L-homoserine

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C5585

meso-diaminopimelate

C3207

7-hydroxylaurate

C3415

laurate

C3409

octanoate

C3412

decanoate

C3387

stearate

C3383

palmitate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C538

18-hydroxyoleate

C13260

phytenate

C13210

oleate

C13266

(15Z)-tetracosenoate

C13298

(3E,5Z)-tetradecadienoate

C6375

di-homo-γ-linolenate

C6379

linoleate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C5935

dinor-12-oxo-phytodienoate

C13300

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

C6163

leukotriene-D4

C6165

leukotriene-E4

C13463

(2R,3S)-2-methylisocitrate

C6185

(R)-lactate

C11212

(R)-3-hydroxybutanoate

C11517

acetate

C3308

pyruvate

C3421

formate

C3420

propanoate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3351

glyoxylate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C8544

cis-2-methylaconitate

C8542

(2S,3S)-2-methylcitrate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C8931

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

C8923

α,ω-9Z-octadecenedioate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C11429

salicylate

C2521

trans-cinnamate

C8968

benzoate

C11482

(R)-pantoate

C11481

orotate

C11485

D-gluconate

C4985

(S)-1-pyrroline-5-carboxylate

C10996

nicotinamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C11313

6-aminopenicillanate

C11298

(7R)-7 aminocephalosporanate

C1599

penicillin G

C1626

isopenicillin N

C10966

all-trans-retinol

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C5778

dimeric urushiol peroxide

C5781

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

C2727

enterobactin

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4815

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

C4817

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

C10234

(heptosyl)2-Kdo2-lipid A

C10235

heptosyl-Kdo2-lipid A

C10248

4-O-phospho-α-Kdo8N-(2→6)-lipid IVA

C10249

α-Kdo8N-(2→6)-lipid IVA

C10255

4-O-phospho-α-Kdo-(2→6)-lipid IVA

C10226

α-Kdo-(2→6)-lipid IVA

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C4549

3-heptaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C7060

3-hexaprenyl-4-hydroxybenzoate

C4545

3-nonaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C15301

all-trans-nonaprenyl diphosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C8666

UDP-α-D-galactose

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8813

α-D-mannose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2057

α-D-ribose-1-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10358

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10368

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10366

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

C10360

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

C10375

a mature peptidoglycan(n) (meso-DAP containing)

C10377

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C355

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C358

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1939

dTDP-α-D-glucose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1930

dTDP-β-L-rhamnose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7780

UDP-α-D-glucose

C7722

UDP-α-D-glucuronate

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7804

UDP-α-D-galactofuranose

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C1009

GDP-α-D-mannose

C3731

glycerol

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C13570

N-acetyl-β-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C2858

glycolaldehyde

C2761

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

C2768

catechol

C10527

myo-inositol

C13576

1D-myo-inositol 1-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C5871

1-octanol

C3450

ethanol

C3448

methanol

C3500

acetaldehyde

C3483

formaldehyde

C3529

1-octanal

C6090

methylglyoxal

C2040

diacetyl

C2028

acetone

C10143

menadione

C10048

caldariellaquinone

C7041

toluene

C6934

4-hydroxybenzoate

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7019

benzene

C12836

phenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2565

2,3-dihydroxy-trans-cinnamate

C2461

3-hydroxy-trans-cinnamate

C11655

(+)-dihydromyricetin

C11661

(+)-taxifolin

C11659

(+)-dihydrokaempferol

C10567

myricetin

C4356

quercetin

C9897

kaempferol

C2915

menadiol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C1869

caldariellaquinol

C1867

3-demethylubiquinol-8

C1868

3-demethylubiquinol-9

C1866

3-demethylubiquinol-10

C1865

3-demethylubiquinol-7

C1863

demethylmenaquinol-8

C1680

menaquinol-8

C5543

ubiquinol-8

C5551

ubiquinol-9

C5563

ubiquinol-10

C5535

ubiquinol-7

C14603

tetrahydromethanopterin

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C5582

(6R)-4a-hydroxy-tetrahydrobiopterin

C5594

5,6,7,8-tetrahydromonapterin

C5066

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12702

cyclic pyranopterin phosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12686

7,8-dihydromonapterin triphosphate

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12718

molybdopterin

C12668

molybdopterin adenine dinucleotide

C14624

5,10-methylene-tetrahydromethanopterin

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C6007

MoO2-molybdopterin cofactor

C10050

FADH2

C10052

FMN

C10988

riboflavin

C10053

FAD

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C9454

adenine

C9455

guanine

C7741

IMP

C7809

AMP

C7827

GMP

C7811

XMP

C7844

ATP

C7745

GTP

C7759

ITP

C7757

ADP

C7795

GDP

C7817

IDP

C7807

dGDP

C7823

dADP

C7747

dIDP

C7751

dGTP

C7783

dATP

C7749

dITP

C7743

dAMP

C7840

dGMP

C7785

hypoxanthine

C15085

guanosine

C15088

adenosine

C15094

xanthosine

C15091

inosine

C9540

preQ1

C7649

isoguanine

C8739

uracil

C8724

dUTP

C8772

dCTP

C8760

UTP

C8761

CTP

C8752

dUDP

C8732

CDP

C8733

dCDP

C8714

UDP

C8764

dTTP

C8720

dTDP

C6462

uridine 3'-monophosphate

C6460

cytidine-3'-monophosphate

C8770

dUMP

C8744

dTMP

C8755

dCMP

C2241

UMP

C2245

CMP

C2706

uridine

C2702

cytidine

C2527

2'-deoxyuridine

C2519

thymidine

C2523

2'-deoxycytidine

C10614

coenzyme A

C10611

(R)-lipoate

C10288

adenylo-succinate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7653

guanosine 3'-monophosphate

C7641

adenosine 3'-monophosphate

C5552

5'-deoxyadenosine

C7837

8-oxo-dGMP

C7647

8-oxo-dGTP

C10267

pppGpp

C10266

ppGpp

C7646

8-oxo-GMP

C7655

8-oxo-GTP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C1817

cyclic di-3',5'-guanylate

C4020

NAD+

C4018

NADP+

C14500

NADH

C14497

NADPH

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C5392

(S)-NADHX

C5394

(R)-NADHX

C10982

nicotinate

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4188

pyridoxamine 5'-phosphate