ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C4688

glutathioselenol

C12274

enol-phenylpyruvate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C11685

S-(hydroxymethyl)mycothiol

C13702

1-piperideine 6-carboxylate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C9431

1,2-dihydro-β-NADP

C1271

4-oxoglutaramate

C1010

ammonia

C4690

selenodiglutathione

C13854

hydrogen selenide

C12090

isopropylamine

C610

3-maleylpyruvate

C383

(salicyl)adenylate

C12462

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

C12464

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

C13901

1-pyrroline

C11895

N-Formyl-L-kynurenine

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C12370

2-dehydro-3-deoxy-D-galactonate 6-phosphate

C1293

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C4674

glutathione disulfide

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C13648

N-ethylammelide

C1369

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

C1367

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

C1371

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

C12375

2-deoxygluconate

C12374

3-dehydro-2-deoxy-D-gluconate

C563

4-methyl-3-oxoadipate-enol-lactone

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C11982

methylamine

C689

N-ethylglycine

C352

2-iminoacetate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11930

N-acetylglutamyl-phosphate

C933

L-canavanine

C11780

D-phenylhydantoin

C5862

N-carbamoyl-D-phenylglycine

C11928

(2S)-4-acetamido-2-aminobutanoate

C12286

ectoine

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C11838

2-succinylbenzoate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C10510

3-oxocholoyl-CoA

C1439

allopregnanolone

C4198

deoxycholoyl-CoA

C10512

12α-hydroxy-3-oxocholan-24-oyl-CoA

C13650

deethylsimazine

C13649

N-ethylammeline

C5558

S-methyl-5'-thioinosine

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C13672

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

C3322

(4Z)-2-oxohept-4-enedioate

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C11606

thiamine phosphate

C11802

4'-phosphopantetheine

C11715

quinolinate

C370

(S)-mandelate

C382

(R)-mandelate

C1291

(4-hydroxyphenyl)acetate

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C12400

cyclohexanone

C793

ε-caprolactone

C14068

6-deoxyerythronolide B

C914

chlorite

C11794

3'-phosphoadenylyl-sulfate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C3253

2,5-dioxopentanoate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C12342

diethylphosphate

C12340

diethylthiophosphate

C13552

dimethylthiophosphate

C11832

orotidine 5'-phosphate

C3314

2-dehydro-3-deoxy-D-galactonate

C571

4-hydroxy-2-nonenal

C11760

prephenate

C13627

DNA without lesion

C2263

4-prenylphlorisobutyrophenone

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C12178

histidinal

C11653

shikimate

C3850

5-amino-6-(D-ribitylamino)uracil

C1415

3-hydroxyanthranilate

C13909

CDP-glycerol

C12208

poly (glycerol phosphate)

C11836

hydroxypyruvate

C6605

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

C1202

(S)-5-hydroxyisourate

C6574

(S)-ureidoglycolate

C14074

prenyl diphosphate

C12325

1,4-dihydroxy-2-naphthoate

C12319

dimethylamine

C1108

acetyl phosphate

C13919

4-guanidinobutanoate

C7865

urea

C562

4-methyl-3-oxoadipate

C1078

(S)-2-amino-6-oxohexanoate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C8210

5-dehydro-2-deoxy-D-gluconate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C691

2,3,5,6-tetracholorophenol

C12171

homogentisate

C1283

4-maleyl-acetoacetate

C1305

4-fumaryl-acetoacetate

C14181

2-maleylacetate

C2580

methylsalicylate

C15056

salicyl alcohol

C393

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

C13970

β-D-fructose 2,6-bisphosphate

C1231

5-aminolevulinate

C11767

porphobilinogen

C12214

(S)-4-amino-5-oxopentanoate

C3281

5-guanidino-2-oxopentanoate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1353

3-phosphooxypyruvate

C12192

carbonic acid

C1528

2-dehydropantoate

C8938

oxalate

C14218

L-β-lysine

C11754

propanoyl phosphate

C12056

L-arginino-succinate

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12494

N-acetyl-D-muramate 6-phosphate

C13928

urea-1-carboxylate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1196

S-methyl-5'-thioadenosine

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C3656

D-gluconate 6-phosphate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C927

carbon monoxide

C11932

N-acetyl-D-galactosamine 6-phosphate

C15282

D-galactosamine-6-phosphate

C13728

7,8-didemethyl-8-hydroxy-5-deazariboflavin

C13729

(2S)-lactyl-2-diphospho-5'-guanosine

C873

coproporphyrinogen III

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C12176

histidinol

C11483

glycolate

C1407

3-hydroxypropanoate

C6349

3-oxopropanoate

C1538

2-C-methyl-D-erythritol 4-phosphate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C11874

N-succinyl-2-amino-6-ketopimelate

C11539

xanthine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C831

N6,N6,O-tridemethylpuromycin

C829

N-acetyl-N6,N6,O-tridemethylpuromycin

C12254

ethanolamine

C9422

nicotinate adenine dinucleotide

C12048

γ-L-glutamyl 5-phosphate

C12315

5,6-dimethylbenzimidazole

C11857

β-nicotinate D-ribonucleotide

C1036

α-ribazole 5'-phosphate

C12352

(S)-dihydroorotate

C2191

carbamoyl phosphate

C14924

carboxyphosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C15283

poly(ribitol phosphate)

C13813

O-D-alanyl-poly(ribitol phosphate)

C1285

4-imidazolone-5-propanoate

C11557

urocanate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C3319

4-methyl-2-oxopentanoate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C10349

glycerone phosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C6361

acetoacetate

C891

citrate

C12230

formamide

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C3482

dihydroxyacetone

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C1002

anthranilate

C11946

N-(5-phosphoribosyl)-anthranilate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C1024

aminoacetone

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C12364

isopentenyl diphosphate

C11634

tartronate semialdehyde

C12139

preuroporphyrinogen

C12150

hydroxyatrazine

C11887

N-isopropylammelide

C12256

ethylamine

C1321

4-aminobutanoate

C12162

hydrogen peroxide

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C1184

5-phospho-β-D-ribosylamine

C6444

oxaloacetate

C11479

phosphoenolpyruvate

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C11639

succinate semialdehyde

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11826

oxalosuccinate

C928

CO2

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C12218

α-D-glucosamine 1-phosphate

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C15306

2,3-didehydroadipyl-CoA

C3262

3-methyl-2-oxobutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C11543

H2O

C6043

4-methylphenol

C12247

L-homocysteine

C6601

(S)-ureidoglycine

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C11480

phenylacetate

C803

ethylphosphate

C13422

hydrogen cyanide

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9800

adenosylcobyrate

C9842

cobalt-precorrin-6B

C9818

cobalt-precorrin-6A

C9811

cob(II)yrinate c-monoamide

C9861

cobyrinate

C9865

Mg-protoporphyrin

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9828

cob(II)yrinate a,c-diamide

C6624

protoheme

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7118

hydrogen sulfide

C7121

oxygen

C6599

2-iminobutanoate

C6708

2-iminopropanoate

C6596

2-iminosuccinate

C11281

2-chloroacetate

C8420

sn-glycerol 1-phosphate

C8419

sn-glycerol 3-phosphate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2155

(2S)-2-phospholactate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C6755

(R)-citramalate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6309

(S)-4-hydroxymandelate

C6311

(R)-4-hydroxymandelate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C11284

2-chloromaleylacetate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5667

pentachlorophenol

C12856

parathion

C12858

paraoxon

C12862

4-nitrophenol

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C1869

caldariellaquinol

C5563

ubiquinol-10

C5543

ubiquinol-8

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C1866

3-demethylubiquinol-10

C1867

3-demethylubiquinol-8

C10048

caldariellaquinone

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C11516

glycine betaine

C8965

hydroxyl radical

C8958

superoxide

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C7864

Fe3+

C4328

ammonium

C4320

H+

C11023

Fe2+

C11009

Mg2+

C11006

Co2+

C7034

hydrogensulfite

C7017

selenite

C7025

OH-

C7014

sulfate

C7024

thiosulfate

C7016

sulfite

C7036

hydrogencarbonate

C7020

selenate

C7006

chloride

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C4606

S-(hydroxymethyl)glutathione

C1476

γ-L-glutamyl-[(S)-allyl]-L-cysteine

C2490

S-allyl-L-cysteine

C1461

γ-L-glutamyl-(S)-methyl-L-cysteine

C1464

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

C4716

S-trans-1-propenyl-L-cysteine

C3990

mycothiol

C3980

deacetylmycothiol

C4678

glutathione

C3978

thiocyanate

C4644

S-sulfanylglutathione

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C9468

dodecyl sulfate

C2169

betaine aldehyde

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C3544

4-aminobutanal

C3548

putrescine

C3574

spermidine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6918

cyanuric acid

C15316

actinorhodin intermediate

C7404

actinorhodin

C6951

4-hydroxyacetophenone

C6934

4-hydroxybenzoate

C3093

urate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C4930

atrazine

C3477

amino-parathion

C3475

methyl parathion

C2917

2,6-dichlorohydroquinone

C2891

2,3,6-trichlorohydroquinone

C2903

hydroquinone

C2899

2,3,5,6-tetrachlorohydroquinone

C2915

menadiol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C12814

4-aminophenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C11409

2,3-dihydroxybenzoate

C2761

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

C5781

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

C5778

dimeric urushiol peroxide

C11429

salicylate

C8974

4-aminobenzoate

C13354

preQ0

C10614

coenzyme A

C2232

oxidized coenzyme F420-0

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14603

tetrahydromethanopterin

C14624

5,10-methylene-tetrahydromethanopterin

C6007

MoO2-molybdopterin cofactor

C5998

thio-molybdenum cofactor

C10994

thiamine

C10996

nicotinamide

C10988

riboflavin

C10982

nicotinate

C4214

pyridoxine 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10966

all-trans-retinol

C10143

menadione

C4806

5-α-pregnane-3,20-dione

C4498

cholest-4-en-3-one

C4520

(25S)-3-oxocholest-4-en-26-oate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C6362

deoxycholate

C6332

cholate

C6306

3-dehydrocholate

C11333

lanosterol

C11744

17-β-hydroxy-5-α-androstan-3-one

C11726

campest-4-en-3β-ol

C11740

7α-hydroxy-5β-cholestan-3-one

C11742

7α,12α-dihydroxy-5β-cholestan-3-one

C10542

androst-4-ene-3,17-dione

C12485

campest-4-en-3-one

C10555

5α-androstane-3,17-dione

C11342

cholesterol

C11346

cholest-5-en-3-one

C11382

ergosterol

C10462

5β-cholestane-3α,7α-diol

C11763

5β-cholestane-3α,7α,12α-triol

C12556

androsterone

C9456

5-α-androstan-3α,17β-diol

C11786

lanosteryl oleate

C11788

ergosteryl oleate

C11720

testosterone

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C2598

D-glucono-1,5-lactone

C6830

erythronolide B

C14423

3-α-mycarosylerythronolide B

C14417

erythromycin D

C10102

cis-dienelactone

C10100

trans-dienelactone

C3727

all-trans-retinyl palmitate

C5313

2-methylbutanoyl-CoA

C4920

isovaleryl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5296

acryloyl-CoA

C4953

(2S)-ethylmalonyl-CoA

C5061

(2R)-ethylmalonyl-CoA

C4196

choloyl-CoA

C5014

phenylacetyl-CoA

C5119

4-cis-undecenoyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5281

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

C5148

6-cis-tridecenoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5106

5-cis, 7-trans-tetradecadienoyl-CoA

C5104

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5629

(5Z)-tetradecenoyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5145

6-trans-tridecenoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5306

3-methylcrotonyl-CoA

C4899

3-methylglutaconyl-CoA

C4913

malonyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5309

3-hydroxypropanoyl-CoA

C4937

3'-dephospho-CoA

C4922

isobutanoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C4933

formyl-CoA

C4907

oxalyl-CoA

C5257

salicyl-CoA

C5230

gentisyl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C5154

(3E)-tetradec-3-enoyl-CoA

C4901

succinyl-CoA

C5314

2-methylacetoacetyl-CoA

C5298

acetyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5310

3-hydroxyisovaleryl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C11195

18-hydroxylinoleoyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7155

(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA

C7172

(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C1177

propanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C2873

pristanoyl-CoA

C10623

phytanoyl-CoA

C5637

cis-vaccenoyl-CoA

C5890

myristoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C5651

palmitoleoyl-CoA

C10758

3-oxoadipyl-CoA

C10760

4-methyl-3-oxoadipyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C7685

allantoate

C11313

6-aminopenicillanate

C1626

isopenicillin N

C1599

penicillin G

C9539

(S)-(+)-allantoin

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8950

chorismate

C6447

maleate

C5596

L-aspartate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C8923

α,ω-9Z-octadecenedioate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3308

pyruvate

C11517

acetate

C3421

formate

C3420

propanoate

C6186

(S)-lactate

C6185

(R)-lactate

C3409

octanoate

C3415

laurate

C3412

decanoate

C3207

7-hydroxylaurate

C3235

gentisate

C538

18-hydroxyoleate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C13266

(15Z)-tetracosenoate

C10658

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

C10642

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

C10672

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

C13210

oleate

C10590

α-linolenate

C6379

linoleate

C3387

stearate

C3383

palmitate

C10639

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

C10670

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

C10655

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

C13260

phytenate

C3542

1-palmitoyl-2-cis-vaccenoyl phosphatidate

C3119

1,2-dicis-vaccenoyl-phosphatidate

C3512

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

C3514

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C3510

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C11503

5-deoxy-D-glucuronate

C11481

orotate

C11482

(R)-pantoate

C11485

D-gluconate

C4985

(S)-1-pyrroline-5-carboxylate

C3536

L-α-amino-ε-keto-pimelate

C3530

L-2-aminoadipate

C3526

L-kynurenine

C5032

carbamate

C5579

L-serine

C5581

L-proline

C5597

L-alanine

C5588

L-leucine

C12067

glycine

C5609

L-glutamine

C11435

(R)-β-lysine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C8797

D-glutamate

C5607

L-glutamate

C5584

L-lysine

C5642

L-arginine

C5605

L-histidine

C5573

L-tyrosine

C2469

L-phenylalanine

C5575

L-tryptophan

C8806

D-arginine

C8799

D-alanine

C12073

L-aspartyl-4-phosphate

C12065

L-saccharopine

C12163

iminoarginine

C12201

L-2-amino-3-oxobutanoate

C3402

3-phospho-L-serine

C6936

S-methyl-L-cysteine

C3628

sarcosine

C9931

N6,N6-dimethyl-L-arginine

C13322

N-carbamoyl-L-aspartate

C5476

formyl-L-isoglutamine

C5478

N-formyl-L-glutamate

C5466

N-formimino-L-glutamate

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C10823

3-hydroxy-L-kynurenine

C5601

L-isoglutamine

C5583

L-methionine

C5612

L-cysteine

C5643

L-asparagine

C5618

L-2,4-diaminobutanoate

C5603

L-isoleucine

C5571

L-valine

C5577

L-threonine

C12231

L-ornithine

C5580

L,L-diaminopimelate

C12303

L-citrulline

C12245

L-homoserine

C12237

L-canaline

C12261

hypoglycin A

C12233

L-glutamate-5-semialdehyde

C15292

S-adenosyl-L-methionine

C12239

L-aspartate 4-semialdehyde

C12229

O-phospho-L-homoserine

C12203

S-adenosyl-L-homocysteine

C5585

meso-diaminopimelate

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3257

2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C11520

hypoglycin B

C11222

sn-glycero-3-phosphoethanolamine

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C5871

1-octanol

C5872

1-dodecanol

C3731

glycerol

C3448

methanol

C3450

ethanol

C10527

myo-inositol

C13580

1D-myo-inositol 5-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C5436

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

C5429

trehalose-cis-methoxy-mono-mycolate

C5437

6-O-trans-keto-mycolyl-trehalose 6-phosphate

C5430

trehalose-trans-keto-mono-mycolate

C5422

6-O-α-mycolyl-trehalose 6-phosphate

C5434

α, α'-trehalose 6-α-mycolate

C5425

6-O-cis-keto-mycolyl-trehalose 6-phosphate

C5435

trehalose-cis-keto-mono-mycolate

C5431

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

C5439

trehalose-trans-methoxy-mono-mycolate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C8321

geranyl diphosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5378

geranylgeranyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C6239

1-myristoyl-sn-glycerol 3-phosphate

C6240

1-palmitoyl-sn-glycerol 3-phosphate

C6242

1-cis-vaccenoyl-sn-glycerol-3-phosphate

C3826

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

C3822

1-palmitoyl-2-myristoyl phosphatidate

C3816

1,2-dimyristoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C4375

5-deoxy-dihydrokalafungin

C4317

(S)-DNPA

C4447

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

C4329

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

C4387

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

C2258

phlorisovalerophenone

C2266

deoxycohumulone

C2261

4-prenylphlorisovalerophenone

C2269

deoxyhumulone

C7277

dihydrokalafungin

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C7073

cellotetraose

C6917

β-D-cellobiose

C5727

raffinose

C6899

stachyose

C10693

sucrose

C6823

α,α-trehalose

C8835

β-D-fructofuranose

C6134

α-L-rhamnopyranose

C6133

β-L-rhamnopyranose

C2012

keto-D-fructose

C2143

D-xylulose

C2144

D-ribulose

C7173

L-ribulose

C2061

α-D-ribofuranose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C13570

N-acetyl-β-D-mannosamine

C9494

D-glyceraldehyde

C2109

α-D-galactopyranose

C7089

keto-L-rhamnulose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10372

a peptidoglycan dimer (S. aureus)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C973

D-ribulose-1,5-bisphosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C6583

α,α-trehalose 6-phosphate

C7780

UDP-α-D-glucose

C1939

dTDP-α-D-glucose

C10263

ADP-α-D-glucose

C1015

GDP-α-D-glucose

C1009

GDP-α-D-mannose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C8666

UDP-α-D-galactose

C7722

UDP-α-D-glucuronate

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7444

UDP-N-acetyl-α-D-glucosamine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C1969

dTDP-D-desosamine

C1900

dTDP-β-L-mycarose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10607

L-ribulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8817

L-rhamnulose 1-phosphate

C8815

α-D-galactose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3682

D-galactonate

C2040

diacetyl

C6090

methylglyoxal

C3529

1-octanal

C3483

formaldehyde

C3500

acetaldehyde

C6246

(S)-lactaldehyde

C2302

precorrin-3A

C2305

precorrin-1

C2311

precorrin-2

C2308

precorrin-6A

C2317

precorrin-6B

C2323

precorrin-7

C2300

precorrin-5

C2314

precorrin-3B

C2320

precorrin-4

C2297

precorrin-8x

C1705

sirohydrochlorin

C8744

dTMP

C8739

uracil

C8755

dCMP

C8720

dTDP

C8764

dTTP

C8761

CTP

C8772

dCTP

C8760

UTP

C8724

dUTP

C8770

dUMP

C8752

dUDP

C8714

UDP

C8733

dCDP

C8732

CDP

C2241

UMP

C2245

CMP

C2702

cytidine

C2706

uridine

C2519

thymidine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C10601

thymine

C7785

hypoxanthine

C9454

adenine

C9455

guanine

C7649

isoguanine

C9540

preQ1

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C7745

GTP

C7759

ITP

C7844

ATP

C7795

GDP

C7817

IDP

C7757

ADP

C7827

GMP

C7741

IMP

C7811

XMP

C7809

AMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7823

dADP

C7807

dGDP

C7840

dGMP

C7743

dAMP

C12742

7,8-dihydrolumazine

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12714

7,8-dihydropterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C7647

8-oxo-dGTP

C7655

8-oxo-GTP

C10267

pppGpp

C10266

ppGpp

C5552

5'-deoxyadenosine

C7652

cyclic-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C10288

adenylo-succinate

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C10280

5-hydroxy-CMP

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA