ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C3355

(3E)-2-oxopent-3-enoate

C9431

1,2-dihydro-β-NADP

C12274

enol-phenylpyruvate

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C1010

ammonia

C13543

mercuriphenyl acetate

C3338

2-oxoglutaramate

C1036

α-ribazole 5'-phosphate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C12315

5,6-dimethylbenzimidazole

C1268

(R)-4'-phosphopantothenate

C13900

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

C102

2,6-dioxo-6-phenylhexa-3-enoate

C3279

2-oxopent-4-enoate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C11930

N-acetylglutamyl-phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C12492

1,6-anhydro-N-acetyl-β-muramate

C12218

α-D-glucosamine 1-phosphate

C13928

urea-1-carboxylate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1431

3-dehydroshikimate

C939

butanoyl phosphate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C891

citrate

C11653

shikimate

C13723

arsenite

C14181

2-maleylacetate

C658

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C3287

trans-O-hydroxybenzylidenepyruvate

C3281

5-guanidino-2-oxopentanoate

C4674

glutathione disulfide

C11606

thiamine phosphate

C13289

15-cis-4,4'-diapophytoene

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C898

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

C11539

xanthine

C691

2,3,5,6-tetracholorophenol

C1208

5-dehydro-D-gluconate

C11800

(R)-pantothenate

C11652

shikimate 3-phosphate

C11760

prephenate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C12369

3-dehydroquinate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C11754

propanoyl phosphate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11832

orotidine 5'-phosphate

C12352

(S)-dihydroorotate

C11802

4'-phosphopantetheine

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C1305

4-fumaryl-acetoacetate

C3344

2-dehydro-3-deoxy-D-gluconate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C6444

oxaloacetate

C3821

5-methylcytosine

C13650

deethylsimazine

C13649

N-ethylammeline

C1538

2-C-methyl-D-erythritol 4-phosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C1102

O-acetyl-L-serine

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C1438

(2S)-2-isopropylmalate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C11932

N-acetyl-D-galactosamine 6-phosphate

C15282

D-galactosamine-6-phosphate

C12044

L-histidinol phosphate

C873

coproporphyrinogen III

C11838

2-succinylbenzoate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C12096

isochorismate

C12325

1,4-dihydroxy-2-naphthoate

C13986

pseudouridine

C11748

pseudouridine 5'-phosphate

C2580

methylsalicylate

C15056

salicyl alcohol

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C1353

3-phosphooxypyruvate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C15311

muconolactone

C6619

(+)-muconolactone

C893

cis,cis-muconate

C1024

aminoacetone

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C1196

S-methyl-5'-thioadenosine

C7865

urea

C1633

(R)-1-aminopropan-2-ol

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C13635

β-D-ribosylnicotinate

C12048

γ-L-glutamyl 5-phosphate

C2325

α-D-galactosyl-diphosphoundecaprenol

C11715

quinolinate

C12162

hydrogen peroxide

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C13909

CDP-glycerol

C1112

ManNAc-GlcNAc-PP-undecaprenol

C11639

succinate semialdehyde

C12254

ethanolamine

C11635

L-tartrate

C11986

meso-tartrate

C13870

2-hydroxy-3-oxosuccinate

C11857

β-nicotinate D-ribonucleotide

C9422

nicotinate adenine dinucleotide

C12319

dimethylamine

C11483

glycolate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C6361

acetoacetate

C12494

N-acetyl-D-muramate 6-phosphate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C11767

porphobilinogen

C12139

preuroporphyrinogen

C12214

(S)-4-amino-5-oxopentanoate

C1231

5-aminolevulinate

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1184

5-phospho-β-D-ribosylamine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1528

2-dehydropantoate

C3656

D-gluconate 6-phosphate

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C12192

carbonic acid

C928

CO2

C11895

N-Formyl-L-kynurenine

C12016

(lipoyl)adenylate

C13627

DNA without lesion

C12178

histidinal

C12176

histidinol

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C10349

glycerone phosphate

C11479

phosphoenolpyruvate

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C15306

2,3-didehydroadipyl-CoA

C2191

carbamoyl phosphate

C14924

carboxyphosphate

C4620

S-formylglutathione

C3262

3-methyl-2-oxobutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C11543

H2O

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11634

tartronate semialdehyde

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C13946

5-(methylsulfanyl)-α-D-ribose

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C10799

DNA with lesion

C12247

L-homocysteine

C11480

phenylacetate

C803

ethylphosphate

C13422

hydrogen cyanide

C5221

adenosylcobalamin

C9874

cob(I)alamin

C1218

adenosylcobalamin 5'-phosphate

C9800

adenosylcobyrate

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C6624

protoheme

C7662

uroporphyrinogen-I

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7118

hydrogen sulfide

C7111

Hg0

C7121

oxygen

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C8420

sn-glycerol 1-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C11476

(R)-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6617

N-acetyl-D-mannosamine 6-phosphate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C12545

ethene

C11284

2-chloromaleylacetate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5667

pentachlorophenol

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C1869

caldariellaquinol

C5543

ubiquinol-8

C1680

menaquinol-8

C1679

menaquinol-6

C1672

menaquinol-7

C1857

demethylmenaquinol-6

C1860

demethylmenaquinol-7

C1863

demethylmenaquinol-8

C1867

3-demethylubiquinol-8

C10048

caldariellaquinone

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C8965

hydroxyl radical

C8958

superoxide

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C4960

N-acetyl-β-neuraminate

C7864

Fe3+

C4328

ammonium

C4320

H+

C11023

Fe2+

C11002

Hg2+

C7034

hydrogensulfite

C7025

OH-

C7024

thiosulfate

C7016

sulfite

C7036

hydrogencarbonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C1476

γ-L-glutamyl-[(S)-allyl]-L-cysteine

C2490

S-allyl-L-cysteine

C1461

γ-L-glutamyl-(S)-methyl-L-cysteine

C1464

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

C4716

S-trans-1-propenyl-L-cysteine

C4606

S-(hydroxymethyl)glutathione

C3978

thiocyanate

C3998

methanethiol

C4678

glutathione

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3610

N1-acetylspermidine

C3583

N1-acetylspermine

C3592

N-acetylputrescine

C3564

spermine

C3574

spermidine

C3548

putrescine

C8545

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

C8537

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C7019

benzene

C3093

urate

C7101

biphenyl

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6934

4-hydroxybenzoate

C3649

benzaldehyde

C2917

2,6-dichlorohydroquinone

C2891

2,3,6-trichlorohydroquinone

C2903

hydroquinone

C2899

2,3,5,6-tetrachlorohydroquinone

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2769

biphenyl-2,3-diol

C11429

salicylate

C8968

benzoate

C8974

4-aminobenzoate

C13354

preQ0

C10611

(R)-lipoate

C10614

coenzyme A

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C10996

nicotinamide

C10994

thiamine

C10988

riboflavin

C10982

nicotinate

C10966

all-trans-retinol

C4520

(25S)-3-oxocholest-4-en-26-oate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C6358

glycocholate

C6332

cholate

C6218

(+)-7-epi-jasmonate

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C10102

cis-dienelactone

C10100

trans-dienelactone

C3727

all-trans-retinyl palmitate

C4953

(2S)-ethylmalonyl-CoA

C5061

(2R)-ethylmalonyl-CoA

C5302

4-hydroxybutanoyl-CoA

C4965

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

C4967

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

C5287

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

C4937

3'-dephospho-CoA

C5035

4-hydroxybenzoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5298

acetyl-CoA

C4913

malonyl-CoA

C4901

succinyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5310

3-hydroxyisovaleryl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C7343

(S)-malyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C2873

pristanoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C11313

6-aminopenicillanate

C1626

isopenicillin N

C1599

penicillin G

C8033

5-amino-4-imidazolecarboxyamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C6449

(4S)-4-hydroxy-2-oxoglutarate

C5596

L-aspartate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C8923

α,ω-9Z-octadecenedioate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3308

pyruvate

C11517

acetate

C3421

formate

C6185

(R)-lactate

C3412

decanoate

C3409

octanoate

C3415

laurate

C3207

7-hydroxylaurate

C951

4-hydroxybutanoate

C11212

(R)-3-hydroxybutanoate

C2005

sophorosyloxydocosanoate

C1646

13-sophorosyloxydocosanoate 6',6''-diacetate

C15254

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

C538

18-hydroxyoleate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C13266

(15Z)-tetracosenoate

C10590

α-linolenate

C6379

linoleate

C3387

stearate

C3383

palmitate

C13210

oleate

C13260

phytenate

C11481

orotate

C11482

(R)-pantoate

C11485

D-gluconate

C4985

(S)-1-pyrroline-5-carboxylate

C3530

L-2-aminoadipate

C3526

L-kynurenine

C5032

carbamate

C8795

D-serine

C5579

L-serine

C11441

β-alanine

C5588

L-leucine

C5581

L-proline

C5597

L-alanine

C12067

glycine

C5609

L-glutamine

C8797

D-glutamate

C5607

L-glutamate

C7597

L-threo-3-phenylserine

C5584

L-lysine

C5642

L-arginine

C5605

L-histidine

C5573

L-tyrosine

C2469

L-phenylalanine

C5575

L-tryptophan

C8806

D-arginine

C8799

D-alanine

C12165

2-hydroxy-5-oxoproline

C12163

iminoarginine

C12201

L-2-amino-3-oxobutanoate

C12073

L-aspartyl-4-phosphate

C3402

3-phospho-L-serine

C6936

S-methyl-L-cysteine

C9931

N6,N6-dimethyl-L-arginine

C13322

N-carbamoyl-L-aspartate

C15000

N-acetyl-L-ornithine

C14988

N-acetyl-L-citrulline

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C11955

O-acetyl-L-homoserine

C5583

L-methionine

C5612

L-cysteine

C5580

L,L-diaminopimelate

C5603

L-isoleucine

C5571

L-valine

C12231

L-ornithine

C5577

L-threonine

C5595

L-cystathionine

C12303

L-citrulline

C12237

L-canaline

C12229

O-phospho-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12255

L-cystine

C12245

L-homoserine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12239

L-aspartate 4-semialdehyde

C12227

O-succinyl-L-homoserine

C5585

meso-diaminopimelate

C9505

L-allo-threonine

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C3345

3-phenyl-2-oxopropanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C3731

glycerol

C3673

D-mannitol 1-phosphate

C3447

propan-1-ol

C3449

butan-1-ol

C3448

methanol

C3450

ethanol

C14807

phytol

C10527

myo-inositol

C3466

D-myo-inositol (1,3,4)-trisphosphate

C3464

D-myo-inositol (1,4,5)-trisphosphate

C5407

D-myo-inositol (1,3,4,5)-tetrakisphosphate

C3453

D-myo-inositol (1,4)-bisphosphate

C13573

1D-myo-inositol 3-monophosphate

C4147

all-trans-4,4'-diaponeurosporene

C3959

all-trans-4,4'-diapophytofluene

C4053

all-trans-4,4'-diapo-ζ-carotene

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C10904

all-trans-4,4'-diapolycopene

C10930

all-trans neurosporene

C10900

all-trans-lycopene

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5382

all-trans-heptaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C4086

1-(β-D ribofuranosyl)nicotinamide

C8835

β-D-fructofuranose

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C13570

N-acetyl-β-D-mannosamine

C5533

L-glyceraldehyde

C9494

D-glyceraldehyde

C2858

glycolaldehyde

C11625

1-O-acetyl-α-maltose

C10372

a peptidoglycan dimer (S. aureus)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C6669

N-monoacetylchitobiose 6'-phosphate

C6671

N,N'-diacetylchitobiose 6'-phosphate

C7780

UDP-α-D-glucose

C1939

dTDP-α-D-glucose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7790

UDP-N-acetyl-α-D-mannosamine

C5126

UDP-4-amino-4-deoxy-β-L-arabinopyranose

C8562

UDP-β-L-threo-pentapyranos-4-ulose

C7750

UDP-β-L-iduronate

C8666

UDP-α-D-galactose

C7722

UDP-α-D-glucuronate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1009

GDP-α-D-mannose

C1043

GDP-4-dehydro-α-D-rhamnose

C7189

GDP-β-L-fucose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C10331

salicin 6-phosphate

C10334

arbutin-6-phosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C3676

L-idonate

C2040

diacetyl

C6090

methylglyoxal

C3523

1-propanal

C3485

butan-1-al

C3500

acetaldehyde

C3483

formaldehyde

C14804

phytenal

C2311

precorrin-2

C2305

precorrin-1

C8720

dTDP

C8752

dUDP

C8772

dCTP

C8733

dCDP

C8755

dCMP

C8707

cytosine

C8744

dTMP

C8739

uracil

C8764

dTTP

C8724

dUTP

C8770

dUMP

C8761

CTP

C8732

CDP

C8760

UTP

C8714

UDP

C6945

5-fluorouracil

C2241

UMP

C2245

CMP

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2519

thymidine

C2527

2'-deoxyuridine

C10601

thymine

C9455

guanine

C9454

adenine

C7785

hypoxanthine

C7649

isoguanine

C9540

preQ1

C15094

xanthosine

C15085

guanosine

C15088

adenosine

C15091

inosine

C7755

2'-deoxyinosine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7759

ITP

C7745

GTP

C7844

ATP

C7817

IDP

C7795

GDP

C7757

ADP

C7827

GMP

C7811

XMP

C7741

IMP

C7809

AMP

C7783

dATP

C7749

dITP

C7751

dGTP

C7823

dADP

C7807

dGDP

C7747

dIDP

C7743

dAMP

C7840

dGMP

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12708

7,8-dihydroneopterin 3'-phosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C2631

2-hydroxychromene-2-carboxylate

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C7652

cyclic-AMP

C10267

pppGpp

C10266

ppGpp

C5552

5'-deoxyadenosine

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C10288

adenylo-succinate

C9773

5-fluorocytosine

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C1817

cyclic di-3',5'-guanylate

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C4243

β-nicotinamide D-ribonucleotide