ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C11543

H2O

C12352

(S)-dihydroorotate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12369

3-dehydroquinate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1268

(R)-4'-phosphopantothenate

C928

CO2

C11802

4'-phosphopantetheine

C12214

(S)-4-amino-5-oxopentanoate

C11748

pseudouridine 5'-phosphate

C1438

(2S)-2-isopropylmalate

C3262

3-methyl-2-oxobutanoate

C3259

2-oxovalerate

C506

3-ethylmalate

C3319

4-methyl-2-oxopentanoate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C1530

(2R,3S)-3-isopropylmalate

C12164

H2

C11690

S-acetyldihydrolipoamide

C12333

dihydrolipoamide

C12162

hydrogen peroxide

C13723

arsenite

C11826

oxalosuccinate

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11832

orotidine 5'-phosphate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C3421

formate

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C11930

N-acetylglutamyl-phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11479

phosphoenolpyruvate

C6444

oxaloacetate

C1265

4-phosphooxy-L-threonine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1353

3-phosphooxypyruvate

C12044

L-histidinol phosphate

C12125

imidazole acetol-phosphate

C4674

glutathione disulfide

C873

coproporphyrinogen III

C1184

5-phospho-β-D-ribosylamine

C1528

2-dehydropantoate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C12048

γ-L-glutamyl 5-phosphate

C12176

histidinol

C12178

histidinal

C1231

5-aminolevulinate

C627

5-methylsalicylate

C15313

4-methylsalicylate

C11767

porphobilinogen

C3850

5-amino-6-(D-ribitylamino)uracil

C1538

2-C-methyl-D-erythritol 4-phosphate

C11946

N-(5-phosphoribosyl)-anthranilate

C12355

dethiobiotin

C12350

7,8-diaminopelargonate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C12139

preuroporphyrinogen

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C11982

methylamine

C12256

ethylamine

C689

N-ethylglycine

C352

2-iminoacetate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C2325

α-D-galactosyl-diphosphoundecaprenol

C11639

succinate semialdehyde

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C11800

(R)-pantothenate

C933

L-canavanine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C1522

3-demethylubiquinol-6

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C12390

D-erythro-imidazole-glycerol-phosphate

C14005

prephytoene diphosphate

C1572

15,16-dihydrobiliverdin

C1102

O-acetyl-L-serine

C13854

hydrogen selenide

C11604

thiamine diphosphate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C11838

2-succinylbenzoate

C12394

6-phospho D-glucono-1,5-lactone

C3656

D-gluconate 6-phosphate

C11715

quinolinate

C11857

β-nicotinate D-ribonucleotide

C1002

anthranilate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C12096

isochorismate

C12218

α-D-glucosamine 1-phosphate

C2191

carbamoyl phosphate

C11760

prephenate

C3417

(S)-3-methyl-2-oxopentanoate

C1036

α-ribazole 5'-phosphate

C12315

5,6-dimethylbenzimidazole

C10349

glycerone phosphate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C891

citrate

C13812

dihydrogeranylgeranyl diphosphate

C13811

tetrahydrogeranylgeranyl diphosphate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C13635

β-D-ribosylnicotinate

C14924

carboxyphosphate

C6614

O-ureido-L-homoserine

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C13913

N-carbamoylputrescine

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13417

2-isopropylmaleate

C1038

α-ribazole

C13196

methyl-1,4-benzoquinol

C13197

2-methyl-1,4-benzoquinone

C2364

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C571

4-hydroxy-2-nonenal

C8938

oxalate

C13728

7,8-didemethyl-8-hydroxy-5-deazariboflavin

C9422

nicotinate adenine dinucleotide

C11654

selenophosphate

C11874

N-succinyl-2-amino-6-ketopimelate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11483

glycolate

C13627

DNA without lesion

C2580

methylsalicylate

C15056

salicyl alcohol

C11493

2-phosphoglycolate

C11653

shikimate

C13955

octadecanal

C15238

5-deoxy-α-ribose 1-phosphate

C1196

S-methyl-5'-thioadenosine

C1633

(R)-1-aminopropan-2-ol

C12848

N5-carboxyaminoimidazole ribonucleotide

C3281

5-guanidino-2-oxopentanoate

C12192

carbonic acid

C3888

7-carboxy-7-deazaguanine

C1431

3-dehydroshikimate

C1391

3-mercaptopyruvate

C12146

hydroxylamine

C1010

ammonia

C13851

hydrogenobyrinate

C1024

aminoacetone

C12213

2-aminomalonate semialdehyde

C15013

2-aminoacetaldehyde

C1631

3-amino-1-hydroxyacetone 1-phosphate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C13850

hydrogenobyrinate a,c-diamide

C13793

(2R,3S)-3-methylmalate

C1491

citraconate

C12325

1,4-dihydroxy-2-naphthoate

C15156

dialurate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C13729

(2S)-lactyl-2-diphospho-5'-guanosine

C7865

urea

C12494

N-acetyl-D-muramate 6-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C11539

xanthine

C4688

glutathioselenol

C4690

selenodiglutathione

C14181

2-maleylacetate

C635

protoanemonin

C1531

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

C13986

pseudouridine

C9431

1,2-dihydro-β-NADP

C14152

pyruvic oxime

C12274

enol-phenylpyruvate

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C5032

carbamate

C3536

L-α-amino-ε-keto-pimelate

C12303

L-citrulline

C5612

L-cysteine

C5583

L-methionine

C5577

L-threonine

C5597

L-alanine

C5607

L-glutamate

C5609

L-glutamine

C12067

glycine

C5579

L-serine

C5584

L-lysine

C2469

L-phenylalanine

C5573

L-tyrosine

C5596

L-aspartate

C5581

L-proline

C5575

L-tryptophan

C5643

L-asparagine

C5605

L-histidine

C5642

L-arginine

C5588

L-leucine

C5571

L-valine

C5603

L-isoleucine

C12239

L-aspartate 4-semialdehyde

C12229

O-phospho-L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C2426

S-sulfo-L-cysteine

C12231

L-ornithine

C12233

L-glutamate-5-semialdehyde

C12247

L-homocysteine

C12245

L-homoserine

C12237

L-canaline

C9505

L-allo-threonine

C5592

L-selenocysteine

C5585

meso-diaminopimelate

C12073

L-aspartyl-4-phosphate

C12163

iminoarginine

C12201

L-2-amino-3-oxobutanoate

C10821

trans-4-hydroxy-L-proline

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C3628

sarcosine

C13322

N-carbamoyl-L-aspartate

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C5580

L,L-diaminopimelate

C8797

D-glutamate

C8799

D-alanine

C8806

D-arginine

C11441

β-alanine

C11429

salicylate

C8974

4-aminobenzoate

C11481

orotate

C11482

(R)-pantoate

C11517

acetate

C11510

5-chloro-5-deoxy-D-ribonate

C4985

(S)-1-pyrroline-5-carboxylate

C2774

pristanate

C3207

7-hydroxylaurate

C3415

laurate

C3409

octanoate

C3412

decanoate

C3387

stearate

C3383

palmitate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C538

18-hydroxyoleate

C3512

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

C3510

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C3514

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C3119

1,2-dicis-vaccenoyl-phosphatidate

C3542

1-palmitoyl-2-cis-vaccenoyl phosphatidate

C13260

phytenate

C13210

oleate

C13266

(15Z)-tetracosenoate

C6379

linoleate

C10590

α-linolenate

C13463

(2R,3S)-2-methylisocitrate

C6185

(R)-lactate

C6186

(S)-lactate

C3308

pyruvate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3351

glyoxylate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C8538

(2R)-homocitrate

C8534

cis-aconitate

C8544

cis-2-methylaconitate

C8555

cis-homoaconitate

C8531

D-threo-isocitrate

C8950

chorismate

C8923

α,ω-9Z-octadecenedioate

C6449

(4S)-4-hydroxy-2-oxoglutarate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C11012

phytyl diphosphate

C3727

all-trans-retinyl palmitate

C10966

all-trans-retinol

C10862

15-cis-phytoene

C10900

all-trans-lycopene

C10930

all-trans neurosporene

C9077

(2E,6E)-farnesyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C7060

3-hexaprenyl-4-hydroxybenzoate

C4545

3-nonaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1810

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C15301

all-trans-nonaprenyl diphosphate

C3826

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

C3816

1,2-dimyristoyl-sn-glycerol 3-phosphate

C3822

1-palmitoyl-2-myristoyl phosphatidate

C3117

dioleoyl phosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C6242

1-cis-vaccenoyl-sn-glycerol-3-phosphate

C6240

1-palmitoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C6239

1-myristoyl-sn-glycerol 3-phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10263

ADP-α-D-glucose

C1009

GDP-α-D-mannose

C8422

CDP-α-D-glucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1896

dTDP-4-dehydro-β-L-rhamnose

C7790

UDP-N-acetyl-α-D-mannosamine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7822

UDP-N-acetyl-α-D-muramate

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10342

D-sedoheptulose 1,7-bisphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10340

D-erythrose 4-phosphate

C10356

4-phospho-D-erythronate

C8813

α-D-mannose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C8815

α-D-galactose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2057

α-D-ribose-1-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6661

sucrose 6G-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C973

D-ribulose-1,5-bisphosphate

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10358

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10368

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10366

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

C10360

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

C10375

a mature peptidoglycan(n) (meso-DAP containing)

C10377

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C355

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C358

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C8835

β-D-fructofuranose

C2108

β-D-galactopyranose

C2109

α-D-galactopyranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C2858

glycolaldehyde

C2012

keto-D-fructose

C5458

keto-L-sorbose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C5286

N-acetyl-β-D-glucosamine

C6571

L-iditol

C6569

D-sorbitol

C6823

α,α-trehalose

C10689

maltotetraose

C10690

maltopentaose

C10691

maltohexaose

C10692

maltoheptaose

C10688

maltotriose

C2770

4-methylcatechol

C5679

4-chlorocatechol

C2768

catechol

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C3450

ethanol

C3448

methanol

C6090

methylglyoxal

C3500

acetaldehyde

C10048

caldariellaquinone

C2040

diacetyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C6934

4-hydroxybenzoate

C3093

urate

C11661

(+)-taxifolin

C8060

(2R,3S,4S)-leucopelargonidin

C8058

(2R,3S,4S)-leucodelphinidin

C8056

(2R,3S,4S)-leucocyanidin

C11659

(+)-dihydrokaempferol

C11655

(+)-dihydromyricetin

C2921

2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol

C2889

2,3-dimethyl-6-phytyl-1,4-benzoquinol

C2886

2-methyl-6-phytyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C1869

caldariellaquinol

C1866

3-demethylubiquinol-10

C1867

3-demethylubiquinol-8

C1868

3-demethylubiquinol-9

C1865

3-demethylubiquinol-7

C1860

demethylmenaquinol-7

C1857

demethylmenaquinol-6

C1863

demethylmenaquinol-8

C1672

menaquinol-7

C1679

menaquinol-6

C1680

menaquinol-8

C3360

plastoquinol-9

C5559

ubiquinol-6

C5563

ubiquinol-10

C5543

ubiquinol-8

C5551

ubiquinol-9

C5535

ubiquinol-7

C5720

4-chlorosalicylate

C5719

5-chlorosalicylate

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C9454

adenine

C7809

AMP

C7827

GMP

C7811

XMP

C7741

IMP

C7844

ATP

C7745

GTP

C7759

ITP

C7757

ADP

C7795

GDP

C7817

IDP

C7807

dGDP

C7823

dADP

C7747

dIDP

C7751

dGTP

C7783

dATP

C7749

dITP

C7785

hypoxanthine

C15091

inosine

C15088

adenosine

C15094

xanthosine

C15085

guanosine

C7755

2'-deoxyinosine

C7813

2'-deoxyadenosine

C14603

tetrahydromethanopterin

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C5066

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12694

sepiapterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12696

7,8-dihydromonapterin

C12664

7,8-dihydroneopterin

C12708

7,8-dihydroneopterin 3'-phosphate

C12170

L-erythro-7,8-dihydrobiopterin

C12172

L-threo-7,8-dihydrobiopterin

C10609

7,8-dihydropteroate

C14624

5,10-methylene-tetrahydromethanopterin

C10597

7,8-dihydrofolate monoglutamate

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10049

FMNH2

C10988

riboflavin

C10052

FMN

C10053

FAD

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C9540

preQ1

C7649

isoguanine

C8761

CTP

C8720

dTDP

C8744

dTMP

C8770

dUMP

C8724

dUTP

C8732

CDP

C8733

dCDP

C8714

UDP

C8752

dUDP

C8755

dCMP

C8760

UTP

C8772

dCTP

C8764

dTTP

C2245

CMP

C2241

UMP

C2706

uridine

C2702

cytidine

C5221

adenosylcobalamin

C1705

sirohydrochlorin

C9861

cobyrinate

C2300

precorrin-5

C2320

precorrin-4

C2311

precorrin-2

C2305

precorrin-1

C2302

precorrin-3A

C2308

precorrin-6A

C2317

precorrin-6B

C9799

cobalt-precorrin-2

C2297

precorrin-8x

C9818

cobalt-precorrin-6A

C9813

cobalt-precorrin-5B

C10614

coenzyme A

C2232

oxidized coenzyme F420-0

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10266

ppGpp

C10267

pppGpp

C10288

adenylo-succinate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5552

5'-deoxyadenosine

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C1817

cyclic di-3',5'-guanylate

C4018

NADP+

C4020

NAD+

C14497

NADPH

C14500

NADH

C14494

(S)-NADPHX

C14491

(R)-NADPHX

C5392

(S)-NADHX

C5394

(R)-NADHX

C10982

nicotinate

C4210

pyridoxal 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C9874

cob(I)alamin

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C6178

heptadecane

C5298

acetyl-CoA

C4913

malonyl-CoA

C4937

3'-dephospho-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C4901

succinyl-CoA

C5635

oleoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C6562

hexadecanedioyl-CoA

C5651

palmitoleoyl-CoA

C5637

cis-vaccenoyl-CoA

C5892

palmitoyl-CoA

C5890

myristoyl-CoA

C5885

stearoyl-CoA

C480

18-hydroxystearoyl-CoA

C491

18-hydroxyoleoyl-CoA

C2873

pristanoyl-CoA

C11187

7-hydroxylauroyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C11195

18-hydroxylinoleoyl-CoA

C11400

phytenoyl-CoA

C10102

cis-dienelactone

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C7994

(2R)-phospho-3-sulfolactate

C12637

3-sulfopyruvate

C12587

L-cysteate

C2209

(2R)-3-sulfolactate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C3978

thiocyanate

C10301

agmatine

C3576

cadaverine

C3548

putrescine

C3574

spermidine

C6526

(2Z)-2-aminobut-2-enoate

C8958

superoxide

C8965

hydroxyl radical

C7014

sulfate

C7036

hydrogencarbonate

C7024

thiosulfate

C7020

selenate

C7028

nitrite

C7022

selenide

C7030

nitrate

C7017

selenite

C7025

OH-

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11009

Mg2+

C10999

Cd2+

C11011

Cu2+

C11006

Co2+

C11023

Fe2+

C4328

ammonium

C4320

H+

C4318

K+

C11281

2-chloroacetate

C11232

3-chloro-cis,cis-muconate

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C13354

preQ0

C13422

hydrogen cyanide

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C6287

2-octaprenylphenol

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6755

(R)-citramalate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2155

(2S)-2-phospholactate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C7121

oxygen

C7118

hydrogen sulfide

C9817

3,8-divinyl protochlorophyllide a

C9841

3,8-divinyl chlorophyllide a

C9836

protochlorophyllide a

C9850

chlorophyllide a

C7658

uroporphyrinogen-III

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7666

protoporphyrinogen IX

C9865

Mg-protoporphyrin

C7676

protoporphyrin IX

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C6408

(Z,Z)-biliverdin-IX α

C3174

(3Z)-phycoerythrobilin

C3173

(2R,3E)-phycoerythrobilin

C3300

(2R,3Z)-phycocyanobilin

C3303

(2R,3E)-phycocyanobilin

C6624

protoheme

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9830

adenosylcobinamide-GDP

C9855

adenosyl-cobinamide phosphate

C9845

cobalt-sirohydrochlorin

C1218

adenosylcobalamin 5'-phosphate

C9807

adenosylcobinamide

C9800

adenosylcobyrate

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C2255

N2

C803

ethylphosphate

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal