ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C3355

(3E)-2-oxopent-3-enoate

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C13901

1-pyrroline

C1010

ammonia

C12274

enol-phenylpyruvate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C9431

1,2-dihydro-β-NADP

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C13702

1-piperideine 6-carboxylate

C1271

4-oxoglutaramate

C11895

N-Formyl-L-kynurenine

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C4690

selenodiglutathione

C4688

glutathioselenol

C13854

hydrogen selenide

C635

protoanemonin

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1285

4-imidazolone-5-propanoate

C11557

urocanate

C1531

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

C1036

α-ribazole 5'-phosphate

C1305

4-fumaryl-acetoacetate

C12315

5,6-dimethylbenzimidazole

C12218

α-D-glucosamine 1-phosphate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C12844

3-hydroxy-4-methylbenzaldehyde

C12806

5-(hydroxymethyl)-2-methylphenol

C12352

(S)-dihydroorotate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C12176

histidinol

C13900

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

C102

2,6-dioxo-6-phenylhexa-3-enoate

C4674

glutathione disulfide

C11653

shikimate

C1431

3-dehydroshikimate

C12369

3-dehydroquinate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C15181

(S)-5-amino-3-oxohexanoate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C3821

5-methylcytosine

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C3253

2,5-dioxopentanoate

C11652

shikimate 3-phosphate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C873

coproporphyrinogen III

C3322

(4Z)-2-oxohept-4-enedioate

C3353

(4S)-4-hydroxy-2-oxoheptanedioate

C898

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

C645

2-methyl-4-chlorophenol

C1160

6-chlorohydroxyquinol

C11873

N-succinyl-L,L-2,6-diaminopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C11874

N-succinyl-2-amino-6-ketopimelate

C11930

N-acetylglutamyl-phosphate

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C12390

D-erythro-imidazole-glycerol-phosphate

C4620

S-formylglutathione

C2191

carbamoyl phosphate

C14924

carboxyphosphate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C610

3-maleylpyruvate

C14913

4-methylgentisate

C14912

(2E)-3-methyl-4,6-dioxohept-2-enedioate

C520

3-methylgentisate

C14915

(2E)-2-methyl-4,6-dioxohept-2-enedioate

C3279

2-oxopent-4-enoate

C3269

(S)-4-hydroxy-2-oxopentanoate

C12178

histidinal

C6099

lipid IVA

C12254

ethanolamine

C13950

pimeloyl-CoA

C1161

6-carboxyhex-2-enoyl-CoA

C13925

N,N-Dimethylformamide

C1528

2-dehydropantoate

C11539

xanthine

C12494

N-acetyl-D-muramate 6-phosphate

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C370

(S)-mandelate

C382

(R)-mandelate

C11964

(R)-mevalonate

C1259

4-trimethylammoniobutanal

C473

(2-hydroxyphenyl)acetate

C1078

(S)-2-amino-6-oxohexanoate

C13257

carboxynorspermidine

C11849

norspermidine

C11715

quinolinate

C562

4-methyl-3-oxoadipate

C11946

N-(5-phosphoribosyl)-anthranilate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C12048

γ-L-glutamyl 5-phosphate

C11857

β-nicotinate D-ribonucleotide

C9422

nicotinate adenine dinucleotide

C13928

urea-1-carboxylate

C11773

phosphocholine

C11493

2-phosphoglycolate

C3850

5-amino-6-(D-ribitylamino)uracil

C14181

2-maleylacetate

C4971

(R)-3-(phenyl)lactoyl-CoA

C1198

5-dehydro-4-deoxy-D-glucarate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C11486

γ-butyrobetaine

C12162

hydrogen peroxide

C12319

dimethylamine

C10349

glycerone phosphate

C12192

carbonic acid

C12016

(lipoyl)adenylate

C11483

glycolate

C11832

orotidine 5'-phosphate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C571

4-hydroxy-2-nonenal

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C13627

DNA without lesion

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C627

5-methylsalicylate

C15313

4-methylsalicylate

C11836

hydroxypyruvate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12492

1,6-anhydro-N-acetyl-β-muramate

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C6614

O-ureido-L-homoserine

C12171

homogentisate

C1283

4-maleyl-acetoacetate

C1353

3-phosphooxypyruvate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C1415

3-hydroxyanthranilate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C6361

acetoacetate

C15306

2,3-didehydroadipyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C1438

(2S)-2-isopropylmalate

C11826

oxalosuccinate

C3319

4-methyl-2-oxopentanoate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C12848

N5-carboxyaminoimidazole ribonucleotide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C1231

5-aminolevulinate

C1002

anthranilate

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C12364

isopentenyl diphosphate

C14074

prenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1108

acetyl phosphate

C1184

5-phospho-β-D-ribosylamine

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C7865

urea

C11756

propionamide

C8366

(indol-3-yl)acetamide

C1098

acrylamide

C1096

acrylate

C1303

4-guanidinobutyramide

C13919

4-guanidinobutanoate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C928

CO2

C11479

phosphoenolpyruvate

C6349

3-oxopropanoate

C1321

4-aminobutanoate

C11639

succinate semialdehyde

C1391

3-mercaptopyruvate

C6444

oxaloacetate

C11543

H2O

C891

citrate

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C12247

L-homocysteine

C11480

phenylacetate

C13422

hydrogen cyanide

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9869

cob(I)inamide

C1218

adenosylcobalamin 5'-phosphate

C9830

adenosylcobinamide-GDP

C9807

adenosylcobinamide

C9855

adenosyl-cobinamide phosphate

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7658

uroporphyrinogen-III

C7121

oxygen

C7118

hydrogen sulfide

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C11281

2-chloroacetate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6620

(R)-3-(phenyl)lactate

C6755

(R)-citramalate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6309

(S)-4-hydroxymandelate

C6311

(R)-4-hydroxymandelate

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C13382

acrylonitrile

C13366

(indole-3-yl)acetonitrile

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C11232

3-chloro-cis,cis-muconate

C11284

2-chloromaleylacetate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5722

2,4,6-trichlorophenol

C5677

2,4-dichlorophenol

C5768

3,5-dichlorocatechol

C5754

5-chloro-3-methylcatechol

C5720

4-chlorosalicylate

C5719

5-chlorosalicylate

C5679

4-chlorocatechol

C7864

Fe3+

C4320

H+

C4328

ammonium

C11023

Fe2+

C7034

hydrogensulfite

C7017

selenite

C7025

OH-

C7016

sulfite

C8958

superoxide

C7020

selenate

C7036

hydrogencarbonate

C7014

sulfate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C8965

hydroxyl radical

C11516

glycine betaine

C2169

betaine aldehyde

C2179

choline

C2181

choline sulfate

C2183

betaine aldehyde hydrate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3544

4-aminobutanal

C3548

putrescine

C4606

S-(hydroxymethyl)glutathione

C1476

γ-L-glutamyl-[(S)-allyl]-L-cysteine

C2490

S-allyl-L-cysteine

C1461

γ-L-glutamyl-(S)-methyl-L-cysteine

C1464

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

C4716

S-trans-1-propenyl-L-cysteine

C4678

glutathione

C3998

methanethiol

C3978

thiocyanate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12623

sulfoacetaldehyde

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C10102

cis-dienelactone

C10100

trans-dienelactone

C4922

isobutanoyl-CoA

C5313

2-methylbutanoyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C5188

dihomo γ-linolenoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C4937

3'-dephospho-CoA

C4920

isovaleryl-CoA

C5014

phenylacetyl-CoA

C5306

3-methylcrotonyl-CoA

C4899

3-methylglutaconyl-CoA

C4953

(2S)-ethylmalonyl-CoA

C5061

(2R)-ethylmalonyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5310

3-hydroxyisovaleryl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5314

2-methylacetoacetyl-CoA

C4913

malonyl-CoA

C4901

succinyl-CoA

C5298

acetyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C11398

(E)-cinnamoyl-CoA

C7343

(S)-malyl-CoA

C6568

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

C7165

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7356

(3R)-3-hydroxypentanoyl-CoA

C7164

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C10757

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

C10759

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

C1177

propanoyl-CoA

C14674

lauroyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C10762

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

C10758

3-oxoadipyl-CoA

C10760

4-methyl-3-oxoadipyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C6358

glycocholate

C6332

cholate

C6218

(+)-7-epi-jasmonate

C9096

(indol-3-yl)acetate

C10982

nicotinate

C10988

riboflavin

C11515

L-carnitine

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C10143

menadione

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5394

(R)-NADHX

C5392

(S)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C10048

caldariellaquinone

C1869

caldariellaquinol

C7649

isoguanine

C7647

8-oxo-dGTP

C7655

8-oxo-GTP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7785

hypoxanthine

C7741

IMP

C10267

pppGpp

C10266

ppGpp

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7811

XMP

C7827

GMP

C7783

dATP

C7817

IDP

C7759

ITP

C7747

dIDP

C7749

dITP

C7751

dGTP

C10288

adenylo-succinate

C7809

AMP

C7745

GTP

C7823

dADP

C7807

dGDP

C7795

GDP

C7844

ATP

C7757

ADP

C9773

5-fluorocytosine

C6945

5-fluorouracil

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C15088

adenosine

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C8764

dTTP

C8772

dCTP

C8724

dUTP

C8760

UTP

C8761

CTP

C8755

dCMP

C8770

dUMP

C8744

dTMP

C2245

CMP

C2241

UMP

C8720

dTDP

C8752

dUDP

C8733

dCDP

C8714

UDP

C8732

CDP

C1009

GDP-α-D-mannose

C1043

GDP-4-dehydro-α-D-rhamnose

C8707

cytosine

C10601

thymine

C8739

uracil

C9454

adenine

C13346

CDP-choline

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C10611

(R)-lipoate

C10614

coenzyme A

C4985

(S)-1-pyrroline-5-carboxylate

C2320

precorrin-4

C2300

precorrin-5

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C11481

orotate

C6829

salicylaldehyde

C7101

biphenyl

C3093

urate

C3649

benzaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C12810

2,5-xylenol

C12802

3-hydroxy-5-methylbenzaldehyde

C12824

3-(hydroxymethyl)-5-methylphenol

C12790

3,5-xylenol

C11409

2,3-dihydroxybenzoate

C2769

biphenyl-2,3-diol

C11421

protocatechuate

C2768

catechol

C2770

4-methylcatechol

C2917

2,6-dichlorohydroquinone

C2915

menadiol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C2521

trans-cinnamate

C11429

salicylate

C8974

4-aminobenzoate

C8966

3-hydroxy-4-methyl-benzoate

C8971

3-hydroxy-5-methyl-benzoate

C8968

benzoate

C2040

diacetyl

C6090

methylglyoxal

C3485

butan-1-al

C3529

1-octanal

C3483

formaldehyde

C3500

acetaldehyde

C6246

(S)-lactaldehyde

C5533

L-glyceraldehyde

C9494

D-glyceraldehyde

C3449

butan-1-ol

C3448

methanol

C3450

ethanol

C3731

glycerol

C6571

L-iditol

C6569

D-sorbitol

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C4068

5-dehydro-4-deoxy-D-glucuronate

C10719

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

C10722

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

C2012

keto-D-fructose

C5458

keto-L-sorbose

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C8835

β-D-fructofuranose

C3743

4-deoxy-L-threo-hex-4-enopyranuronate

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8811

α-D-glucopyranose 1-phosphate

C5615

D-glyceraldehyde 3-phosphate

C10356

4-phospho-D-erythronate

C10342

D-sedoheptulose 1,7-bisphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C10604

D-ribulose 5-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C7869

acetamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8950

chorismate

C5596

L-aspartate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C8928

D-galactarate

C13463

(2R,3S)-2-methylisocitrate

C8536

3-carboxy-cis,cis-muconate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3308

pyruvate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C11517

acetate

C3421

formate

C3420

propanoate

C6186

(S)-lactate

C6185

(R)-lactate

C3415

laurate

C3409

octanoate

C3235

gentisate

C3387

stearate

C3383

palmitate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13298

(3E,5Z)-tetradecadienoate

C13300

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

C5935

dinor-12-oxo-phytodienoate

C6375

di-homo-γ-linolenate

C11482

(R)-pantoate

C3536

L-α-amino-ε-keto-pimelate

C3526

L-kynurenine

C5032

carbamate

C5579

L-serine

C5573

L-tyrosine

C12067

glycine

C5577

L-threonine

C5609

L-glutamine

C5612

L-cysteine

C5584

L-lysine

C5605

L-histidine

C5642

L-arginine

C5607

L-glutamate

C2469

L-phenylalanine

C5581

L-proline

C5597

L-alanine

C5575

L-tryptophan

C5571

L-valine

C5603

L-isoleucine

C5588

L-leucine

C5583

L-methionine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C8797

D-glutamate

C8799

D-alanine

C8805

D-aspartate

C5601

L-isoglutamine

C5580

L,L-diaminopimelate

C12231

L-ornithine

C12073

L-aspartyl-4-phosphate

C13322

N-carbamoyl-L-aspartate

C5476

formyl-L-isoglutamine

C5478

N-formyl-L-glutamate

C5466

N-formimino-L-glutamate

C12065

L-saccharopine

C12063

seleno-L-homocysteine

C12061

L-selenomethionine

C3402

3-phospho-L-serine

C6936

S-methyl-L-cysteine

C14973

N-acetyl-L-glutamate

C10823

3-hydroxy-L-kynurenine

C10821

trans-4-hydroxy-L-proline

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C12233

L-glutamate-5-semialdehyde

C15292

S-adenosyl-L-methionine

C12263

1-aminocyclopropane-1-carboxylate

C12239

L-aspartate 4-semialdehyde

C12203

S-adenosyl-L-homocysteine

C12245

L-homoserine

C5585

meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine