an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

1-piperideine-2-carboxylate

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-aminopentanoate

4-oxoglutaramate

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

hydrogen selenide

N-ethylammelide

2-dehydro-3-deoxy-D-gluconate

2-oxopent-4-enoate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

6-O-acetyl-β-D-mannosyl-(1,4)-β-D-glucoronate-(1,2)-α-N-acetyl-D-mannosyl-(1,3)-β-D-glucosyl-(1,4)-α-D-glucosyl-diphosphoundecaprenol

D-Man-β-(1→4)-GlcA-β-(1→2)-6-O-acetyl-D-Man-α-(1→3)-D-Glc-β-(1→4)-D-Glc-α-1-diphospho-ditrans,octacis-undecaprenol

4,6-CH3(COO-)C-D-Man-β-(1→4)-GlcA-β-(1→2)-6-O-acetyl-D-Man-α-(1→3)-D-Glc-β-(1→4)-D-Glc-α-1-diphospho-ditrans,octacis-undecaprenol

1-piperideine 6-carboxylate

glutathione disulfide

aminoacetone

5-guanidino-2-oxopentanoate

2-dehydro-3-deoxy-D-galactonate

4-amino-2-methyl-5-pyrimidinemethanol

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-iminoacetate

4-fumaryl-acetoacetate

2,5-dioxopentanoate

6-amino-2-oxohexanoate

β-D-GlcA-(1→2)-α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

D-Man-β-(1→4)-GlcA-β-(1→2)-D-Man-α-(1→3)-D-Glc-β-(1→4)-D-Glc-α-1-diphospho-ditrans,octacis-undecaprenol

β-D-glucosyl-(1,4)-α-D-glucosyl-diphosphoundecaprenol

α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

α-D-glucopyranosyl-diphosphoundecaprenol

N-succinyl-2-amino-6-ketopimelate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

urea

4,4'-dihydroxy-3,3'-dimethoxystilbene

vanillin

glutathionylspermidine

hydroxypyruvate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

2-chloro-4-methyl-cis,cis-muconate

4-methylmuconolactone

4-chloro-2-methyl-cis,cis-muconate

N-acetyl-D-muramate 6-phosphate

2-aminomalonate semialdehyde

2-aminoacetaldehyde

(S)-4-hydroxy-2-oxopentanoate

D-erythro-imidazole-glycerol-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

acetoacetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

5'-phosphoguanylyl(3'→5')guanosine

lipid X

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

3-ureidopropanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

N-Formyl-L-kynurenine

2-(α-hydroxyethyl)thiamine diphosphate

salicyl alcohol

methylsalicylate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

acetyl phosphate

citraconate

(2R,3S)-3-methylmalate

(S)-2-amino-6-oxohexanoate

(2-hydroxyphenyl)acetate

3-hydroxypropanoate

3-oxopropanoate

L-gulono-1,4-lactone

carbon monoxide

ethanolamine

(4-hydroxyphenyl)acetate

5-dehydro-D-gluconate

2-keto-L-gulonate

carbonic acid

2-phosphoglycolate

glycolate

deethylsimazine

N-ethylammeline

4-hydroxy-2-nonenal

5-methylcytosine

3-amino-1-hydroxyacetone 1-phosphate

DNA without lesion

xanthine

2-maleylacetate

N-succinyl-L,L-2,6-diaminopimelate

dethiobiotin

2-dehydro-3-deoxy-D-galactonate 6-phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

nicotinate adenine dinucleotide

(S)-4-amino-5-oxopentanoate

oxaloacetate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

β-nicotinate D-ribonucleotide

quinolinate

α-D-glucosamine 1-phosphate

5-deoxy-α-ribose 1-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(R)-pantothenate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

coproporphyrinogen III

hydrogen peroxide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

glycerone phosphate

N-(5-phosphoribosyl)-anthranilate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

shikimate

5-aminolevulinate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

3-deoxy-D-glycero-2,5-hexodiulosonate

histidinal

imidazole acetol-phosphate

L-histidinol phosphate

histidinol

(S)-2,3,4,5-tetrahydrodipicolinate

carboxyphosphate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

citrate

thiamine phosphate

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

3-dehydroquinate

3-dehydroshikimate

5-phospho-β-D-ribosylamine

porphobilinogen

preuroporphyrinogen

S-formylglutathione

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

prephenate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3-hydroxyanthranilate

2-amino-3-carboxymuconate-6-semialdehyde

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

urocanate

4-imidazolone-5-propanoate

pimeloyl-CoA

8-amino-7-oxononanoate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

2-dehydropantoate

homogentisate

4-maleyl-acetoacetate

3-deoxy-D-arabino-heptulosonate 7-phosphate

orotidine 5'-phosphate

oxalosuccinate

anthranilate

4'-phosphopantetheine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

γ-L-glutamyl 5-phosphate

L-canavanine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

(S)-dihydroorotate

3-demethylubiquinol-6

3-deoxy-α-D-manno-2-octulosonate

lipid A disaccharide (E. coli)

lipid IV_A

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

H₂O

CO₂

carbamoyl phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

phosphoenolpyruvate

prenyl diphosphate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

hydrogen cyanide

protoheme

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

siroheme

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

3-(all-trans-heptaprenyl)benzene-1,2-diol

3-(all-trans-nonaprenyl)benzene-1,2-diol

3-(all-trans-decaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-decaprenylphenol

2-nonaprenylphenol

2-heptaprenylphenol

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

2-methoxy-6-(all-trans-heptaprenyl)phenol

2-methoxy-6-(all-trans-nonaprenyl)phenol

6-(all-trans-decaprenyl)-2-methoxy-phenol

preQ₀

(indole-3-yl)acetonitrile

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

5-chloro-2-methyl-dienelactone

5-chloro-2-methyl-maleylacetate

2-chloro-3-methyl-dienelactone

2-chloro-3-methyl-maleylacetate

2-chloro-5-methyl-dienelactone

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

5-chloromaleylacetate

bromochloromethane

3-chloro-cis,cis-muconate

2,5-dichloro-4-methyl-muconolactone

2-chloro-2-(2-chloro-5-oxofuran-2-yl)acetate

2,3-dichloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconolactone

2,5-dichloro-3-methyl-muconate

3,6-dichloro-3a-methyl-dihydro-3H-furo[3,2-b]furan-2,5-dione

2,5-dichloro-3-methyl-muconolactone

(+)-5-chloromuconolactone

2-(2,4-dichloro-5-oxofuran-2-yl)propanoate

3,5-dichloro-2-methyl-muconate

2-chloro-2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

2,3-dichloro-5-methyl-muconate

(+)-2-chloromuconolactone

2-chloro-cis,cis-muconate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

(1R,2S)-3,4-dichloro-6-methylcyclohexa-3,5-diene-1,2-diol

3,4-dichloro-6-methylcatechol

3,4-dichlorotoluene

5-chloro-3-methylcatechol

3,6-dichloro-4-methylcatechol

(1R,2S)-3,6-dichloro-4-methylcyclohexa-3,5-diene-1,2-diol

2,5-dichlorotoluene

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

4,6-dichloro-3-methylcatechol

4,5-dichlorobenzene-1,2-diol

Fe³⁺

H⁺

K⁺

Na⁺

ammonium

Fe²⁺

sulfate

hydrogensulfite

selenite

OH^-

thiosulfate

superoxide

hydrogencarbonate

sulfite

selenate

molybdate

phosphate

triphosphate

diphosphate

bromide

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

cadaverine

putrescine

spermidine

S-methyl-L-methionine

S-(hydroxymethyl)glutathione

methanethiol

thiocyanate

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

(R)-S-lactoylglutathione

all-trans-retinyl palmitate

2-methyl-trans-dienelactone

2-methyl-cis-dienelactone

5-chloro-trans-dienelactone

D-galactono-1,4-lactone

5-chloro-3-methyl-cis-dienelactone

2-chloro-4-methyl-cis-dienelactone

2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

2-methylbutanoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

malonyl-CoA

acetyl-CoA

succinyl-CoA

3'-dephospho-CoA

crotonyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

oleoyl-CoA

18-hydroxyoleoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

propanoyl-CoA

lauroyl-CoA

stearoyl-CoA

palmitoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

nicotinate

riboflavin

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxal

pyridoxine

pyridoxamine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FMNH₂

FAD

FADH₂

FMN

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-8

ubiquinol-10

ubiquinol-6

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-10

isoguanine

8-oxo-GTP

8-oxo-GMP

dIDP

IDP

dITP

dIMP

XTP

cyclic-AMP

8-oxo-dGTP

8-oxo-dGMP

2'-deoxyadenosine

2'-deoxyinosine

ppGpp

pppGpp

ITP

dAMP

dGMP

hypoxanthine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

IMP

5'-deoxyadenosine

adenylo-succinate

XMP

GMP

dATP

dADP

dGTP

dGDP

GTP

GDP

AMP

ATP

ADP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

inosine

adenosine

guanosine

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dCTP

dTTP

dUTP

UTP

CTP

dCMP

dUMP

dTMP

CMP

UMP

dTDP

dUDP

dCDP

CDP

UDP

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cytidine-3'-monophosphate

uridine 3'-monophosphate

GDP-α-D-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

preQ₁

cytosine

thymine

uracil

guanine

adenine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

orotate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

urate

toluene

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

protocatechuate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

catechol

3,4-dihydroxyphenylacetate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-nonaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-heptaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-nonaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-heptaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

diacetyl

methylglyoxal

glycolaldehyde

formaldehyde

acetaldehyde

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-xylopyranose

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

ethanol

methanol

glycerol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 3-monophosphate

5-dehydro-4-deoxy-D-glucuronate

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo8N-(2→6)-lipid IV_A

4-O-phospho-α-Kdo8N-(2→6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

isoprimeverose

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

4-deoxy-L-threo-hex-4-enopyranuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^G-phosphate

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-galactonate

L-gulonate

D-gluconate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

6-aminopenicillanate

isopenicillin N

penicillin G

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

3-methyl-cis,cis-muconate

chorismate

succinate

fumarate

L-aspartate

(S)-malate

3-carboxy-cis,cis-muconate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

acetate

formate

(R)-lactate

laurate

stearate

palmitate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

carbamate

L-serine

L-cysteine

L-tyrosine

L-threonine

L-asparagine

glycine

L-glutamine

L-histidine

L-arginine

L-lysine

L-glutamate

L-methionine

L-valine

L-tryptophan

L-isoleucine

L-phenylalanine

L-leucine

L-alanine

L-proline

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-arginine

D-lysine

D-proline

D-alanine

D-methionine

L-isoglutamine

L-cystathionine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-ornithine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

iminoarginine

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-selenomethionine

3-phospho-L-serine

N-acetyl-L-methionine

N-acetyl-L-glutamate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

L-canaline

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine