ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C12056

L-arginino-succinate

C11543

H2O

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C1431

3-dehydroshikimate

C12369

3-dehydroquinate

C2586

(E)-4-coumaroyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C12139

preuroporphyrinogen

C928

CO2

C11826

oxalosuccinate

C11479

phosphoenolpyruvate

C891

citrate

C6444

oxaloacetate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C1415

3-hydroxyanthranilate

C11946

N-(5-phosphoribosyl)-anthranilate

C12355

dethiobiotin

C13813

O-D-alanyl-poly(ribitol phosphate)

C15283

poly(ribitol phosphate)

C12364

isopentenyl diphosphate

C1268

(R)-4'-phosphopantothenate

C11800

(R)-pantothenate

C1325

4-amino-4-deoxychorismate

C1184

5-phospho-β-D-ribosylamine

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C11802

4'-phosphopantetheine

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C3259

2-oxovalerate

C506

3-ethylmalate

C3319

4-methyl-2-oxopentanoate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3262

3-methyl-2-oxobutanoate

C3417

(S)-3-methyl-2-oxopentanoate

C12162

hydrogen peroxide

C13850

hydrogenobyrinate a,c-diamide

C11874

N-succinyl-2-amino-6-ketopimelate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11639

succinate semialdehyde

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C12218

α-D-glucosamine 1-phosphate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C933

L-canavanine

C11930

N-acetylglutamyl-phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C3850

5-amino-6-(D-ribitylamino)uracil

C14924

carboxyphosphate

C2191

carbamoyl phosphate

C12352

(S)-dihydroorotate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C1528

2-dehydropantoate

C3322

(4Z)-2-oxohept-4-enedioate

C13672

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C5862

N-carbamoyl-D-phenylglycine

C11780

D-phenylhydantoin

C6361

acetoacetate

C12390

D-erythro-imidazole-glycerol-phosphate

C473

(2-hydroxyphenyl)acetate

C12171

homogentisate

C3253

2,5-dioxopentanoate

C1198

5-dehydro-4-deoxy-D-glucarate

C15181

(S)-5-amino-3-oxohexanoate

C4676

glutathionylspermidine

C11767

porphobilinogen

C927

carbon monoxide

C12169

hop-22(29)-ene

C4201

squalene

C12048

γ-L-glutamyl 5-phosphate

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C352

2-iminoacetate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C13635

β-D-ribosylnicotinate

C11857

β-nicotinate D-ribonucleotide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C12848

N5-carboxyaminoimidazole ribonucleotide

C13729

(2S)-lactyl-2-diphospho-5'-guanosine

C13728

7,8-didemethyl-8-hydroxy-5-deazariboflavin

C8938

oxalate

C3269

(S)-4-hydroxy-2-oxopentanoate

C3279

2-oxopent-4-enoate

C1002

anthranilate

C1036

α-ribazole 5'-phosphate

C12315

5,6-dimethylbenzimidazole

C12494

N-acetyl-D-muramate 6-phosphate

C11715

quinolinate

C10349

glycerone phosphate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C13627

DNA without lesion

C3656

D-gluconate 6-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C11483

glycolate

C11604

thiamine diphosphate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11832

orotidine 5'-phosphate

C12125

imidazole acetol-phosphate

C12350

7,8-diaminopelargonate

C873

coproporphyrinogen III

C9422

nicotinate adenine dinucleotide

C13196

methyl-1,4-benzoquinol

C13197

2-methyl-1,4-benzoquinone

C12254

ethanolamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C14074

prenyl diphosphate

C2263

4-prenylphlorisobutyrophenone

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C1283

4-maleyl-acetoacetate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C11748

pseudouridine 5'-phosphate

C1391

3-mercaptopyruvate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C13793

(2R,3S)-3-methylmalate

C1491

citraconate

C1353

3-phosphooxypyruvate

C623

(3S,5S)-3,5-diaminohexanoate

C14218

L-β-lysine

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C14181

2-maleylacetate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12374

3-dehydro-2-deoxy-D-gluconate

C12375

2-deoxygluconate

C11652

shikimate 3-phosphate

C1291

(4-hydroxyphenyl)acetate

C1108

acetyl phosphate

C4657

3-α(S)-strictosidine

C8323

tryptamine

C1743

secologanin

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C1265

4-phosphooxy-L-threonine

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1186

5-oxo-L-proline

C11539

xanthine

C12230

formamide

C7865

urea

C1293

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

C4674

glutathione disulfide

C11653

shikimate

C13986

pseudouridine

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C12178

histidinal

C12176

histidinol

C12044

L-histidinol phosphate

C12105

propan-2-ol

C12756

(2R)-2-amino-4-oxopentanoate

C1457

(2R,4S)-2, 4-diaminopentanoate

C1223

5-aminopentanoate

C11895

N-Formyl-L-kynurenine

C13854

hydrogen selenide

C4688

glutathioselenol

C4690

selenodiglutathione

C1271

4-oxoglutaramate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C9431

1,2-dihydro-β-NADP

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C1010

ammonia

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C5032

carbamate

C3526

L-kynurenine

C3530

L-2-aminoadipate

C12303

L-citrulline

C5596

L-aspartate

C5577

L-threonine

C5571

L-valine

C5607

L-glutamate

C5609

L-glutamine

C5575

L-tryptophan

C5579

L-serine

C5603

L-isoleucine

C12067

glycine

C5584

L-lysine

C5573

L-tyrosine

C5642

L-arginine

C2469

L-phenylalanine

C5597

L-alanine

C5605

L-histidine

C5581

L-proline

C5643

L-asparagine

C5588

L-leucine

C5583

L-methionine

C12247

L-homocysteine

C12203

S-adenosyl-L-homocysteine

C12229

O-phospho-L-homoserine

C15292

S-adenosyl-L-methionine

C12233

L-glutamate-5-semialdehyde

C12231

L-ornithine

C12239

L-aspartate 4-semialdehyde

C12245

L-homoserine

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C12223

D-ornithine

C5585

meso-diaminopimelate

C12073

L-aspartyl-4-phosphate

C10823

3-hydroxy-L-kynurenine

C10821

trans-4-hydroxy-L-proline

C5478

N-formyl-L-glutamate

C5476

formyl-L-isoglutamine

C15000

N-acetyl-L-ornithine

C5466

N-formimino-L-glutamate

C5462

N-formyl-L-methionine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C13322

N-carbamoyl-L-aspartate

C3402

3-phospho-L-serine

C5580

L,L-diaminopimelate

C5601

L-isoglutamine

C8799

D-alanine

C8796

D-proline

C8797

D-glutamate

C11435

(R)-β-lysine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C11421

protocatechuate

C8974

4-aminobenzoate

C11517

acetate

C11482

(R)-pantoate

C11481

orotate

C11510

5-chloro-5-deoxy-D-ribonate

C4985

(S)-1-pyrroline-5-carboxylate

C2774

pristanate

C3383

palmitate

C3387

stearate

C3412

decanoate

C3409

octanoate

C3415

laurate

C3207

7-hydroxylaurate

C3418

butanoate

C538

18-hydroxyoleate

C553

16-hydroxypalmitate

C550

18-hydroxystearate

C13266

(15Z)-tetracosenoate

C13210

oleate

C13260

phytenate

C10655

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

C10672

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

C10670

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

C10642

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

C10639

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

C10658

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

C6379

linoleate

C10590

α-linolenate

C6185

(R)-lactate

C6186

(S)-lactate

C11212

(R)-3-hydroxybutanoate

C3308

pyruvate

C3421

formate

C3420

propanoate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C3351

glyoxylate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C8534

cis-aconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C8950

chorismate

C8923

α,ω-9Z-octadecenedioate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C11313

6-aminopenicillanate

C1599

penicillin G

C1626

isopenicillin N

C2258

phlorisovalerophenone

C4817

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C9077

(2E,6E)-farnesyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C11206

(8S,9S,10S)-8,10-dimethyl-1-octalin

C11211

(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol

C11209

(-)-geosmin

C2261

4-prenylphlorisovalerophenone

C2266

deoxycohumulone

C2269

deoxyhumulone

C4549

3-heptaprenyl-4-hydroxybenzoate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C7060

3-hexaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C15301

all-trans-nonaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C4086

1-(β-D ribofuranosyl)nicotinamide

C8835

β-D-fructofuranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C2858

glycolaldehyde

C2012

keto-D-fructose

C2143

D-xylulose

C2144

D-ribulose

C7173

L-ribulose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C5286

N-acetyl-β-D-glucosamine

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C3731

glycerol

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1896

dTDP-4-dehydro-β-L-rhamnose

C1930

dTDP-β-L-rhamnose

C1939

dTDP-α-D-glucose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7822

UDP-N-acetyl-α-D-muramate

C7722

UDP-α-D-glucuronate

C7780

UDP-α-D-glucose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C8666

UDP-α-D-galactose

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C8815

α-D-galactose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C10604

D-ribulose 5-phosphate

C10607

L-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6583

α,α-trehalose 6-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C10693

sucrose

C6823

α,α-trehalose

C6899

stachyose

C5727

raffinose

C2903

hydroquinone

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C3450

ethanol

C3448

methanol

C2849

3-(N-morpholino)propanal

C6090

methylglyoxal

C3485

butan-1-al

C3483

formaldehyde

C3500

acetaldehyde

C10143

menadione

C10048

caldariellaquinone

C2040

diacetyl

C2028

acetone

C6951

4-hydroxyacetophenone

C6934

4-hydroxybenzoate

C3093

urate

C2915

menadiol

C1869

caldariellaquinol

C1863

demethylmenaquinol-8

C1680

menaquinol-8

C6043

4-methylphenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C9454

adenine

C9455

guanine

C7809

AMP

C7811

XMP

C7741

IMP

C7827

GMP

C7844

ATP

C7745

GTP

C7759

ITP

C7757

ADP

C7795

GDP

C7817

IDP

C7807

dGDP

C7823

dADP

C7751

dGTP

C7783

dATP

C7785

hypoxanthine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C7755

2'-deoxyinosine

C7813

2'-deoxyadenosine

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C10609

7,8-dihydropteroate

C10597

7,8-dihydrofolate monoglutamate

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10049

FMNH2

C15044

reduced riboflavin

C10050

FADH2

C10052

FMN

C10988

riboflavin

C10053

FAD

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C8739

uracil

C10601

thymine

C7649

isoguanine

C8770

dUMP

C8724

dUTP

C8732

CDP

C8733

dCDP

C8714

UDP

C8752

dUDP

C8744

dTMP

C8720

dTDP

C8761

CTP

C8760

UTP

C8755

dCMP

C8772

dCTP

C8764

dTTP

C4012

5,6-dihydrouracil

C7801

5,6-dihydrothymine

C2241

UMP

C2245

CMP

C2702

cytidine

C2706

uridine

C2527

2'-deoxyuridine

C2523

2'-deoxycytidine

C2519

thymidine

C9874

cob(I)alamin

C5221

adenosylcobalamin

C10614

coenzyme A

C2232

oxidized coenzyme F420-0

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5552

5'-deoxyadenosine

C10288

adenylo-succinate

C10266

ppGpp

C10267

pppGpp

C7643

cyclic-GMP

C7652

cyclic-AMP

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C1817

cyclic di-3',5'-guanylate

C4020

NAD+

C4018

NADP+

C14500

NADH

C14497

NADPH

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C1434

D-alanyl-D-alanine

C11516

glycine betaine

C5392

(S)-NADHX

C5394

(R)-NADHX

C10982

nicotinate

C10994

thiamine

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C11480

phenylacetate

C9096

(indol-3-yl)acetate

C4498

cholest-4-en-3-one

C4476

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4460

cholest-dien-3-one

C10538

androsta-1,4-diene-3,17-dione

C10542

androst-4-ene-3,17-dione

C11346

cholest-5-en-3-one

C11342

cholesterol

C4911

methylacrylyl-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5298

acetyl-CoA

C5314

2-methylacetoacetyl-CoA

C4937

3'-dephospho-CoA

C4913

malonyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C4901

succinyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C4922

isobutanoyl-CoA

C5014

phenylacetyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C5635

oleoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C10758

3-oxoadipyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C5892

palmitoyl-CoA

C5885

stearoyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C2873

pristanoyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C10623

phytanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C11187

7-hydroxylauroyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C11400

phytenoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C1337

crotonyl-CoA

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C10100

trans-dienelactone

C10102

cis-dienelactone

C4606

S-(hydroxymethyl)glutathione

C4678

glutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C4136

isethionate

C4126

1-butanesulfonate

C4124

3-(N-morpholino)propanesulfonate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C3978

thiocyanate

C4644

S-sulfanylglutathione

C2169

betaine aldehyde

C3574

spermidine

C3548

putrescine

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C11222

sn-glycero-3-phosphoethanolamine

C8958

superoxide

C8965

hydroxyl radical

C7016

sulfite

C7020

selenate

C7036

hydrogencarbonate

C7024

thiosulfate

C7025

OH-

C7017

selenite

C7057

molybdate

C7030

nitrate

C7034

hydrogensulfite

C7014

sulfate

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11006

Co2+

C11023

Fe2+

C4320

H+

C4318

K+

C4328

ammonium

C11281

2-chloroacetate

C13422

hydrogen cyanide

C13366

(indole-3-yl)acetonitrile

C6290

(S)-3-hydroxy-isobutanoate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6755

(R)-citramalate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2155

(2S)-2-phospholactate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C8420

sn-glycerol 1-phosphate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C7121

oxygen

C7118

hydrogen sulfide

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C6624

protoheme

C9828

cob(II)yrinate a,c-diamide

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C803

ethylphosphate

C10799

DNA with lesion