an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

citraconate

(2R,3S)-3-methylmalate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

propanoyl phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

4'-phosphopantetheine

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

carbonic acid

(2-hydroxyphenyl)acetate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

3-phosphooxypyruvate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

DNA without lesion

meso-tartrate

2-hydroxy-3-oxosuccinate

2-maleylacetate

cis,cis-muconate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

D-gluconate 6-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

3-hydroxy-4-methyl-anthranilate pentapeptide lactone

3-hydroxypropanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

tartronate semialdehyde

2-phosphoglycolate

glycolate

prephenate

shikimate 3-phosphate

ADP-D-glycero-β-D-manno-heptose

3-deoxy-α-D-manno-2-octulosonate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

4-amino-4-deoxychorismate

4-hydroxy-2-nonenal

L-gulono-1,4-lactone

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

5-enolpyruvoyl-shikimate 3-phosphate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

N⁵-carboxyaminoimidazole ribonucleotide

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

salicyl alcohol

methylsalicylate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

3-dehydroquinate

3-dehydroshikimate

(S)-4-amino-5-oxopentanoate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

histidinol

lipid IV_A

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

6-deoxyerythronolide B

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

hydroxypyruvate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4,5-dihydroxyphthalate

N²-succinylglutamate

pseudouridine 5'-phosphate

xanthine

isopentenyl diphosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

L-tartrate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

α-D-glucosamine 1-phosphate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

5-aminolevulinate

porphobilinogen

D-erythro-imidazole-glycerol-phosphate

orotidine 5'-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

nicotinate adenine dinucleotide

N-(5-phosphoribosyl)-anthranilate

anthranilate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

urea

acetoacetate

(R)-pantothenate

β-nicotinate D-ribonucleotide

quinolinate

hydrogen peroxide

2-dehydropantoate

succinate semialdehyde

(S)-2,3,4,5-tetrahydrodipicolinate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

carboxyphosphate

oxalosuccinate

homogentisate

4-maleyl-acetoacetate

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

oxaloacetate

citrate

4-methylsalicylate

5-methylsalicylate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

O-ureido-L-homoserine

1-deoxy-L-glycero-tetrulose 4-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

5-dehydro-D-gluconate

L-selenocystathionine

glycerone phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-imidazolone-5-propanoate

urocanate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

L-arginino-succinate

canavaninosuccinate

L-canavanine

carbamoyl phosphate

(S)-dihydroorotate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

5-methylcytosine

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

coproporphyrinogen III

CO₂

3-oxopropanoate

γ-L-glutamyl 5-phosphate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

H₂O

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

4-oxalocrotonate

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

aminoacetone

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

lipid X

lipid A disaccharide (E. coli)

protoanemonin

selenodiglutathione

glutathioselenol

pseudouridine

(S)-ureidoglycolate

vanillin

2-pyrone-4,6-dicarboxylate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

preuroporphyrinogen

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

shikimate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

glutathione disulfide

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

hydrogen selenide

5-amino-6-(5-phospho-D-ribitylamino)uracil

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

autoinducer 2

6-phospho D-glucono-1,5-lactone

(2E)-2-hydroxypenta-2,4-dienoate

2,6-dioxo-6-phenylhexa-3-enoate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(R)-1-amino-2-propanol O-2-phosphate

2-iminoacetate

3-phosphonopyruvate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N²-succinyl-L-glutamate 5-semialdehyde

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

oxalate

(S)-5-amino-3-oxohexanoate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-dehydro-3-deoxy-D-gluconate

4-methyl-3-oxoadipate

pimelate

ethanolamine

(E)-glutaconate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

muconolactone

(+)-muconolactone

(R)-4-phosphopantoate

(R)-4'-phosphopantothenate

prenyl diphosphate

phthalate

phthalate 4,5-cis-dihydrodiol

O-acetyl-L-serine

(R)-3-methylitaconate

dimethylmaleate

7-carboxy-7-deazaguanine

N-ethylmaleimide

N-ethylsuccinimide

ADP-L-glycero-β-D-manno-heptose

histidinal

N6'-acetylkanamycin-B

5-(methylsulfanyl)-α-D-ribose

S-ribosyl-L-homocysteine

selenophosphate

2-oxoadipate

N-Formyl-L-kynurenine

3-hydroxyanthranilate

pimeloyl-CoA

8-amino-7-oxononanoate

4-(γ-L-glutamylamino)butanoate

4-aminobutanoate

4-fumaryl-acetoacetate

5-carboxymethyl-2-hydroxymuconate

3-maleylpyruvate

4-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

phenylacetate

phosphonoacetaldehyde

adenosylcobalamin

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

adenosylcobyrate

protoheme

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

hydrogen sulfide

oxygen

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(R)-2-hydroxyglutarate

preQ₀

acrylonitrile

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

2,5-dichloro-p-quinol

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2,5-dichloro-p-quinone

3-chloro-cis,cis-muconate

5-chlorosalicylate

4-chlorosalicylate

4-chlorocatechol

Fe³⁺

K⁺

H⁺

ammonium

Fe²⁺

sulfite

superoxide

selenate

hydrogencarbonate

sulfate

hydrogensulfite

selenite

OH^-

selenide

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

N-acetylputrescine

cadaverine

putrescine

spermidine

glutathione

methanethiol

3-sulfocatechol

(R)-S-lactoylglutathione

all-trans-retinyl palmitate

erythronolide B

3-α-mycarosylerythronolide B

erythromycin D

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

linoleoyl-CoA

α-linolenoyl-CoA

phenylacetyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

malonyl-CoA

acetyl-CoA

2-methylbutanoyl-CoA

(2R,3S)-β-methylmalyl-CoA

formyl-CoA

oxalyl-CoA

isovaleryl-CoA

(S)-3-aminobutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(S)-malyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxylinoleoyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

stearoyl-CoA

cis-vaccenoyl-CoA

palmitoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

pristanoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

riboflavin

nicotinate

nicotinamide

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

ubiquinol-7

ubiquinol-10

ubiquinol-9

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-9

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

dGMP

dAMP

pppGpp

ppGpp

adenosine 3'-monophosphate

guanosine 3'-monophosphate

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

XMP

GMP

5'-deoxyadenosine

dATP

IDP

ITP

dIDP

dITP

dGTP

IMP

adenylo-succinate

AMP

dADP

dGDP

GTP

GDP

ADP

ATP

isoguanine

8-oxo-dGTP

8-oxo-GTP

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

5-fluorouracil

inosine

xanthosine

guanosine

adenosine

cytidine

uridine

2'-deoxyuridine

thymidine

2'-deoxycytidine

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

CTP

UTP

dCMP

dUMP

dTMP

CMP

UMP

dTDP

dUDP

dCDP

UDP

CDP

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

uridine 3'-monophosphate

cytidine-3'-monophosphate

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannuronate

GDP-β-L-fucose

preQ₁

thymine

cytosine

uracil

guanine

adenine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-D-desosamine

dTDP-β-L-mycarose

coenzyme A

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

(S)-1-pyrroline-5-carboxylate

9H carbazole

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

orotate

quercetin

biphenyl

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

benzyl alcohol

2'-aminobiphenyl-2,3-diol

(2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

3-(hydroxymethyl)-5-methylphenol

3,5-xylenol

protocatechuate

catechol

4-methylcatechol

2,3-dihydroxybenzoate

biphenyl-2,3-diol

3-methylcatechol

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

vanillate

5-chloroprotocatechuate

salicylate

4-aminobenzoate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

benzoate

diacetyl

methylglyoxal

glycolaldehyde

isobutanal

acetaldehyde

1-octanal

1-propanal

butan-1-al

phytenal

D-glyceraldehyde

L-glyceraldehyde

α-D-xylopyranose

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

methanol

propan-1-ol

butan-1-ol

ethanol

phytol

1-octanol

glycerol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

ethylene glycol

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

isoprimeverose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

kanamycin B

L-gulonate

D-galactonate

D-gluconate

L-idonate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

6-aminopenicillanate

penicillin G

isopenicillin N

actinomycin D

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

acetamide

(S)-(+)-allantoin

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

chorismate

(3E)-2-oxohex-3-enedioate

succinate

fumarate

L-aspartate

(S)-malate

α,ω-9Z-octadecenedioate

D-glucarate

D-galactarate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

cis-aconitate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

decanoate

7-hydroxylaurate

laurate

octanoate

gentisate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

linoleate

α-linolenate

stearate

oleate

palmitate

phytenate

(R)-pantoate

carbamate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

L-serine

L-asparagine

L-tyrosine

L-threonine

glycine

L-glutamine

L-cysteine

L-lysine

L-histidine

L-arginine

L-glutamate

L-phenylalanine

L-isoleucine

L-tryptophan

L-proline

L-alanine

L-methionine

L-valine

L-leucine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-alanine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-cystathionine

L-ornithine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-citrulline

L-canaline

hypoglycin A

L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine