ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C11543

H2O

C1208

5-dehydro-D-gluconate

C12029

S-ribosyl-L-homocysteine

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C928

CO2

C11836

hydroxypyruvate

C11483

glycolate

C6444

oxaloacetate

C11826

oxalosuccinate

C891

citrate

C11479

phosphoenolpyruvate

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C12056

L-arginino-succinate

C1108

acetyl phosphate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C11838

2-succinylbenzoate

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C8366

(indol-3-yl)acetamide

C11756

propionamide

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11639

succinate semialdehyde

C1528

2-dehydropantoate

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C10349

glycerone phosphate

C11857

β-nicotinate D-ribonucleotide

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C12044

L-histidinol phosphate

C12125

imidazole acetol-phosphate

C3656

D-gluconate 6-phosphate

C939

butanoyl phosphate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C12176

histidinol

C12178

histidinal

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C13946

5-(methylsulfanyl)-α-D-ribose

C11802

4'-phosphopantetheine

C14924

carboxyphosphate

C2191

carbamoyl phosphate

C11832

orotidine 5'-phosphate

C2586

(E)-4-coumaroyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C13813

O-D-alanyl-poly(ribitol phosphate)

C15283

poly(ribitol phosphate)

C1196

S-methyl-5'-thioadenosine

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1024

aminoacetone

C12162

hydrogen peroxide

C873

coproporphyrinogen III

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C933

L-canavanine

C12218

α-D-glucosamine 1-phosphate

C6361

acetoacetate

C2033

P1,P4-bis(5'-guanosyl) tetraphosphate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C9422

nicotinate adenine dinucleotide

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C1454

2,5-didehydro-D-gluconate

C3295

2-keto-D-gluconate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C11930

N-acetylglutamyl-phosphate

C11760

prephenate

C11767

porphobilinogen

C12139

preuroporphyrinogen

C13793

(2R,3S)-3-methylmalate

C1491

citraconate

C3259

2-oxovalerate

C506

3-ethylmalate

C3319

4-methyl-2-oxopentanoate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3262

3-methyl-2-oxobutanoate

C13627

DNA without lesion

C12324

autoinducer 2

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C12096

isochorismate

C12325

1,4-dihydroxy-2-naphthoate

C1002

anthranilate

C11946

N-(5-phosphoribosyl)-anthranilate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C3850

5-amino-6-(D-ribitylamino)uracil

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C14202

hexulose 6-phosphate

C3888

7-carboxy-7-deazaguanine

C3417

(S)-3-methyl-2-oxopentanoate

C14495

3-hydroxy-5- oxohexanoyl-CoA

C14754

3-hydroxy-5-oxohexanoate

C1321

4-aminobutanoate

C6349

3-oxopropanoate

C14218

L-β-lysine

C11539

xanthine

C191

L-selenocystathionine

C13635

β-D-ribosylnicotinate

C12169

hop-22(29)-ene

C4201

squalene

C2580

methylsalicylate

C15056

salicyl alcohol

C12390

D-erythro-imidazole-glycerol-phosphate

C15282

D-galactosamine-6-phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C1186

5-oxo-L-proline

C11493

2-phosphoglycolate

C12192

carbonic acid

C1391

3-mercaptopyruvate

C1688

phloretin

C13817

pinocembrin chalcone

C12374

3-dehydro-2-deoxy-D-gluconate

C12375

2-deoxygluconate

C11800

(R)-pantothenate

C12369

3-dehydroquinate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1353

3-phosphooxypyruvate

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C8210

5-dehydro-2-deoxy-D-gluconate

C8191

5-dehydro-2-deoxy-D-gluconate 6-phosphate

C6597

3-ureidopropanoate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C3344

2-dehydro-3-deoxy-D-gluconate

C6585

N-carbamoyl-2-oxoglycine

C6574

(S)-ureidoglycolate

C13899

4-chlorobenzoate

C12848

N5-carboxyaminoimidazole ribonucleotide

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1305

4-fumaryl-acetoacetate

C7349

chloramphenicol

C12409

creatinine

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C11653

shikimate

C352

2-iminoacetate

C1268

(R)-4'-phosphopantothenate

C11881

N-methylhydantoin

C13681

5-carboxymethyl-2-hydroxymuconate

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C8333

(indol-3-yl)pyruvate

C11874

N-succinyl-2-amino-6-ketopimelate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C12352

(S)-dihydroorotate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11604

thiamine diphosphate

C11654

selenophosphate

C6605

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

C1202

(S)-5-hydroxyisourate

C1415

3-hydroxyanthranilate

C13552

dimethylthiophosphate

C12342

diethylphosphate

C12340

diethylthiophosphate

C11895

N-Formyl-L-kynurenine

C15013

2-aminoacetaldehyde

C855

coenzyme F390-A

C5862

N-carbamoyl-D-phenylglycine

C11780

D-phenylhydantoin

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C7865

urea

C11754

propanoyl phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C1538

2-C-methyl-D-erythritol 4-phosphate

C1555

(S)-2,3-dihydrodipicolinate

C12016

(lipoyl)adenylate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C1291

(4-hydroxyphenyl)acetate

C13870

2-hydroxy-3-oxosuccinate

C11986

meso-tartrate

C11635

L-tartrate

C1431

3-dehydroshikimate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C12254

ethanolamine

C14003

N-acetyl-L-glutamate 5-semialdehyde

C1102

O-acetyl-L-serine

C1112

ManNAc-GlcNAc-PP-undecaprenol

C13909

CDP-glycerol

C11794

3'-phosphoadenylyl-sulfate

C571

4-hydroxy-2-nonenal

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C13854

hydrogen selenide

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C14907

gallate

C3338

2-oxoglutaramate

C1580

1,2,3,5-tetrahydroxybenzene

C11743

pyrogallol

C15155

phloroglucinol

C15072

dihydrophloroglucinol

C12394

6-phospho D-glucono-1,5-lactone

C11873

N-succinyl-L,L-2,6-diaminopimelate

C4674

glutathione disulfide

C11824

oxamate

C12230

formamide

C11715

quinolinate

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C3255

2-keto-L-gulonate

C4688

glutathioselenol

C4690

selenodiglutathione

C1271

4-oxoglutaramate

C9431

1,2-dihydro-β-NADP

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C1010

ammonia

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C12545

ethene

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C11480

phenylacetate

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C6332

cholate

C6358

glycocholate

C5298

acetyl-CoA

C4913

malonyl-CoA

C5314

2-methylacetoacetyl-CoA

C4901

succinyl-CoA

C4937

3'-dephospho-CoA

C4911

methylacrylyl-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C5075

5-aminolevulinyl-CoA

C4920

isovaleryl-CoA

C5250

dihydro-4-coumaroyl-CoA

C4922

isobutanoyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5059

4-chlorobenzoyl-coA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5014

phenylacetyl-CoA

C5313

2-methylbutanoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C10758

3-oxoadipyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C5845

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

C5843

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6200

3-oxohexanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C6558

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

C6562

hexadecanedioyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C5890

myristoyl-CoA

C480

18-hydroxystearoyl-CoA

C491

18-hydroxyoleoyl-CoA

C2873

pristanoyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C10623

phytanoyl-CoA

C11187

7-hydroxylauroyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C14697

decanoyl-CoA

C14662

hexanoyl-CoA

C1177

propanoyl-CoA

C1179

pentanoyl-CoA

C1175

butanoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C7176

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C11400

phytenoyl-CoA

C11398

(E)-cinnamoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C1337

crotonyl-CoA

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C2598

D-glucono-1,5-lactone

C3727

all-trans-retinyl palmitate

C4740

S-methyl-L-methionine

C4716

S-trans-1-propenyl-L-cysteine

C1464

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

C1461

γ-L-glutamyl-(S)-methyl-L-cysteine

C2490

S-allyl-L-cysteine

C1476

γ-L-glutamyl-[(S)-allyl]-L-cysteine

C4606

S-(hydroxymethyl)glutathione

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C7994

(2R)-phospho-3-sulfolactate

C12637

3-sulfopyruvate

C12587

L-cysteate

C12581

taurine

C4136

isethionate

C4126

1-butanesulfonate

C4124

3-(N-morpholino)propanesulfonate

C2209

(2R)-3-sulfolactate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C3998

methanethiol

C3978

thiocyanate

C4644

S-sulfanylglutathione

C11516

glycine betaine

C2169

betaine aldehyde

C10301

agmatine

C3574

spermidine

C3548

putrescine

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C2930

ferrichrome

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C11222

sn-glycero-3-phosphoethanolamine

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C8958

superoxide

C8965

hydroxyl radical

C7014

sulfate

C7036

hydrogencarbonate

C7016

sulfite

C7020

selenate

C7022

selenide

C7057

molybdate

C7025

OH-

C7017

selenite

C7034

hydrogensulfite

C7006

chloride

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11005

Zn2+

C11006

Co2+

C11001

Mo2+

C11023

Fe2+

C11009

Mg2+

C4328

ammonium

C4326

Na+

C4320

H+

C11281

2-chloroacetate

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C11510

5-chloro-5-deoxy-D-ribonate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C7306

5'-deoxy-5'-fluoroadenosine

C13088

chloramphenicol 3-acetate

C12862

4-nitrophenol

C12858

paraoxon

C12856

parathion

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C13354

preQ0

C13422

hydrogen cyanide

C8185

(S)-2-hydroxyglutarate

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C6287

2-octaprenylphenol

C6290

(S)-3-hydroxy-isobutanoate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6755

(R)-citramalate

C6601

(S)-ureidoglycine

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C7118

hydrogen sulfide

C7121

oxygen

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C9865

Mg-protoporphyrin

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C6624

protoheme

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9861

cobyrinate

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C803

ethylphosphate

C12247

L-homocysteine

C6043

4-methylphenol

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C5686

a methyl group

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C11520

hypoglycin B

C5032

carbamate

C3526

L-kynurenine

C3536

L-α-amino-ε-keto-pimelate

C12073

L-aspartyl-4-phosphate

C12061

L-selenomethionine

C12063

seleno-L-homocysteine

C12201

L-2-amino-3-oxobutanoate

C12165

2-hydroxy-5-oxoproline

C11955

O-acetyl-L-homoserine

C10821

trans-4-hydroxy-L-proline

C10823

3-hydroxy-L-kynurenine

C13320

N-carbamoylglycine

C5476

formyl-L-isoglutamine

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C5466

N-formimino-L-glutamate

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C3628

sarcosine

C13322

N-carbamoyl-L-aspartate

C6936

S-methyl-L-cysteine

C3402

3-phospho-L-serine

C5612

L-cysteine

C5583

L-methionine

C5595

L-cystathionine

C5597

L-alanine

C5596

L-aspartate

C5571

L-valine

C2469

L-phenylalanine

C5573

L-tyrosine

C5575

L-tryptophan

C5579

L-serine

C5607

L-glutamate

C12231

L-ornithine

C5642

L-arginine

C5577

L-threonine

C5581

L-proline

C5609

L-glutamine

C5605

L-histidine

C5603

L-isoleucine

C5588

L-leucine

C5584

L-lysine

C5580

L,L-diaminopimelate

C5643

L-asparagine

C5601

L-isoglutamine

C8797

D-glutamate

C8799

D-alanine

C12067

glycine

C11443

creatine

C11444

N-carbamoylsarcosine

C11441

β-alanine

C11435

(R)-β-lysine

C11434

(R)-3-amino-2-methylpropanoate

C11433

(S)-3-amino-2-methylpropanoate

C12303

L-citrulline

C12227

O-succinyl-L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12233

L-glutamate-5-semialdehyde

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12245

L-homoserine

C12261

hypoglycin A

C12237

L-canaline

C5585

meso-diaminopimelate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C3418

butanoate

C3207

7-hydroxylaurate

C3415

laurate

C3409

octanoate

C3412

decanoate

C3387

stearate

C3383

palmitate

C3419

pentanoate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C538

18-hydroxyoleate

C13260

phytenate

C13210

oleate

C13266

(15Z)-tetracosenoate

C6379

linoleate

C10590

α-linolenate

C6165

leukotriene-E4

C6163

leukotriene-D4

C6185

(R)-lactate

C11212

(R)-3-hydroxybutanoate

C11517

acetate

C3308

pyruvate

C3421

formate

C3420

propanoate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C3257

2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C8534

cis-aconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C8923

α,ω-9Z-octadecenedioate

C6442

succinate

C6443

fumarate

C2802

(S)-malate

C11429

salicylate

C11421

protocatechuate

C11409

2,3-dihydroxybenzoate

C11503

5-deoxy-D-glucuronate

C11485

D-gluconate

C11482

(R)-pantoate

C11487

D-mannonate

C7685

allantoate

C11481

orotate

C4985

(S)-1-pyrroline-5-carboxylate

C7869

acetamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C9539

(S)-(+)-allantoin

C10966

all-trans-retinol

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C5781

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

C5778

dimeric urushiol peroxide

C668

iron(III) dicitrate

C9641

betanidin quinone

C9712

betanidin

C4815

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

C4817

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C3676

L-idonate

C4086

1-(β-D ribofuranosyl)nicotinamide

C10693

sucrose

C10688

maltotriose

C10689

maltotetraose

C10691

maltohexaose

C10692

maltoheptaose

C10690

maltopentaose

C6899

stachyose

C5727

raffinose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10334

arbutin-6-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C10331

salicin 6-phosphate

C8666

UDP-α-D-galactose

C10338

5-phospho-α-D-ribose 1-diphosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C8815

α-D-galactose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6669

N-monoacetylchitobiose 6'-phosphate

C6671

N,N'-diacetylchitobiose 6'-phosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C10381

a peptidoglycan dimer (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7822

UDP-N-acetyl-α-D-muramate

C7780

UDP-α-D-glucose

C7722

UDP-α-D-glucuronate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7790

UDP-N-acetyl-α-D-mannosamine

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C10263

ADP-α-D-glucose

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C3731

glycerol

C3673

D-mannitol 1-phosphate

C8835

β-D-fructofuranose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C5286

N-acetyl-β-D-glucosamine

C2012

keto-D-fructose

C2108

β-D-galactopyranose

C2109

α-D-galactopyranose

C9494

D-glyceraldehyde

C2061

α-D-ribofuranose

C2858

glycolaldehyde

C2143

D-xylulose

C2903

hydroquinone

C2761

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

C2760

3,4-dihydroxyphenylacetate

C10527

myo-inositol

C10535

scyllo-inositol

C10534

1D-chiro-inositol

C10525

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

C10522

scyllo-inosose

C10519

1-keto-D-chiro-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C3450

ethanol

C3449

butan-1-ol

C3448

methanol

C2849

3-(N-morpholino)propanal

C3500

acetaldehyde

C3485

butan-1-al

C3483

formaldehyde

C6090

methylglyoxal

C2040

diacetyl

C2542

isoliquiritigenin

C15317

2',4,4',6'-tetrahydroxychalcone

C10182

2,5-piperidinedione

C10143

menadione

C10048

caldariellaquinone

C3093

urate

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C6934

4-hydroxybenzoate

C12814

4-aminophenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C3475

methyl parathion

C3477

amino-parathion

C2133

6-isobutyl-4-hydroxy-2-pyrone

C9923

6,7-dehydrobaicalein

C9939

baicalein

C2915

menadiol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C1869

caldariellaquinol

C1867

3-demethylubiquinol-8

C1863

demethylmenaquinol-8

C5543

ubiquinol-8

C9454

adenine

C9455

guanine

C7809

AMP

C7741

IMP

C7827

GMP

C7811

XMP

C7745

GTP

C7844

ATP

C7759

ITP

C7795

GDP

C7757

ADP

C7817

IDP

C7807

dGDP

C7823

dADP

C7747

dIDP

C7751

dGTP

C7783

dATP

C7749

dITP

C7743

dAMP

C7840

dGMP

C7785

hypoxanthine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C12742

7,8-dihydrolumazine

C10049

FMNH2

C10050

FADH2

C15044

reduced riboflavin

C10052

FMN

C10988

riboflavin

C10053

FAD

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C14603

tetrahydromethanopterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C12714

7,8-dihydropterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12696

7,8-dihydromonapterin

C12664

7,8-dihydroneopterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12668

molybdopterin adenine dinucleotide

C12702

cyclic pyranopterin phosphate

C12718

molybdopterin

C14624

5,10-methylene-tetrahydromethanopterin

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C6007

MoO2-molybdopterin cofactor

C2001

hydantoin

C2311

precorrin-2

C2305

precorrin-1

C9540

preQ1

C7649

isoguanine

C10601

thymine

C8739

uracil

C8747

uridine 2'3'-cyclic monophosphate

C8750

cytidine 2',3'-cyclic monophosphate

C8724

dUTP

C8752

dUDP

C8761

CTP

C8732

CDP

C8772

dCTP

C8733

dCDP

C8760

UTP

C8714

UDP

C8764

dTTP

C8720

dTDP

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C8770

dUMP

C8755

dCMP

C8744

dTMP

C6460

cytidine-3'-monophosphate

C6462

uridine 3'-monophosphate

C8741

dipicolinate

C2241

UMP

C2245

CMP

C2706

uridine

C2702

cytidine

C2527

2'-deoxyuridine

C2523

2'-deoxycytidine

C2519

thymidine

C10614

coenzyme A

C10611

(R)-lipoate

C2239

oxidized coenzyme F420-2

C7841

adenosine 2',3'-cyclic monophosphate

C7645

guanosine 2',3'-cyclic monophosphate

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C10267

pppGpp

C7653

guanosine 3'-monophosphate

C7641

adenosine 3'-monophosphate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10266

ppGpp

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C1817

cyclic di-3',5'-guanylate

C9420

two adjacent thymidines in DNA

C9419

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

C4018

NADP+

C4020

NAD+

C14497

NADPH

C14500

NADH

C5392

(S)-NADHX

C5394

(R)-NADHX

C10982

nicotinate

C10994

thiamine

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4188

pyridoxamine 5'-phosphate

C4216

pyridoxamine

C4208

pyridoxine

C4200

pyridoxal