an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2-hydroxyphenyl)acetate

homogentisate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

2,3,5,6-tetracholorophenol

ectoine

(2S)-4-acetamido-2-aminobutanoate

coproporphyrinogen III

6-deoxyerythronolide B

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

(S)-2,3,4,5-tetrahydrodipicolinate

8-amino-7-oxononanoate

pimeloyl-CoA

4-hydroxy-2-nonenal

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

porphobilinogen

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-fumarylpyruvate

3-maleylpyruvate

(lipoyl)adenylate

urea-1-carboxylate

3-mercaptopyruvate

3-methyl-2-butenal

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3-phosphooxypyruvate

(R)-1-aminopropan-2-ol

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

(2R,3S)-3-methylmalate

citraconate

thiamine diphosphate

creatinine

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

(S)-5-amino-3-oxohexanoate

3-hydroxypropanoate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

3-hydroxyanthranilate

propanoyl phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(S)-ureidoglycolate

N-isopropylammelide

hydroxyatrazine

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

isopropylamine

formamide

(2Z,4E)-2-aminomuconate

(3S,5S)-3,5-diaminohexanoate

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

(R)-1-amino-2-propanol O-2-phosphate

glutathione disulfide

glutathioselenol

selenodiglutathione

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

muconolactone

autoinducer 2

S-ribosyl-L-homocysteine

dialurate

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

H₂O

4-oxoglutaramate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

picolinate

1,2-dihydro-β-NADP

succinate semialdehyde

4-aminobutanoate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

S-(hydroxymethyl)mycothiol

3-oxopropanoate

enol-phenylpyruvate

3-methyl-2-oxobutanoate

ammonia

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(2E)-2-hydroxypenta-2,4-dienoate

hydrogenobyrinate a,c-diamide

(3E)-2-oxopent-3-enoate

O-acetyl-L-serine

hydrogen selenide

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,3-didehydroadipyl-CoA

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

acetoacetate

oxaloacetate

CO₂

oxalosuccinate

carbamoyl phosphate

isopentenyl diphosphate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

carboxyphosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-methylcytosine

3-dehydroshikimate

3-dehydroquinate

L-histidinol phosphate

imidazole acetol-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

preuroporphyrinogen

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

5-phospho-β-D-ribosylamine

4-amino-4-deoxychorismate

urea

2-dehydro-3-deoxy-D-gluconate 6-phosphate

citrate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

dethiobiotin

(R)-4'-phosphopantothenate

(R)-pantothenate

α-D-glucosamine 1-phosphate

(E)-3-(methoxycarbonyl)pent-2-enedioate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

glycerone phosphate

4-imidazolone-5-propanoate

urocanate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

γ-L-glutamyl 5-phosphate

5-carboxymethyl-2-hydroxymuconate

cis,cis-muconate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

hydrogenobyrinate

xanthine

prenyl diphosphate

2-aminoacetaldehyde

(4-hydroxyphenyl)acetate

glycolate

benzoylsuccinyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

(2S)-lactyl-2-diphospho-5'-guanosine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

5-amino-6-(D-ribitylamino)uracil

2-C-methyl-D-erythritol 4-phosphate

ethanolamine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-oxo-L-proline

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

N-carbamoylputrescine

hydrogen peroxide

L-β-lysine

salicyl alcohol

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

7,8-diaminopelargonate

O-ureido-L-homoserine

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

(R)-mandelate

(S)-mandelate

DNA without lesion

acetyl phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

12α-hydroxy-3-oxocholan-24-oyl-CoA

deoxycholoyl-CoA

allopregnanolone

3-oxocholoyl-CoA

1,4-dihydroxy-2-naphthoate

glutathionylspermidine

dimethylamine

β-D-ribosylnicotinate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

L-arginino-succinate

canavaninosuccinate

2-dehydropantoate

α-ribazole

quinolinate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(S)-dihydroorotate

orotidine 5'-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

methylsalicylate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

shikimate

prephenate

histidinol

histidinal

D-erythro-imidazole-glycerol-phosphate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

2-amino-3-carboxymuconate-6-semialdehyde

L-canavanine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-maleylacetate

(S)-2-amino-6-oxohexanoate

selenophosphate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

3'-phosphoadenylyl-sulfate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

hexulose 6-phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

carbonic acid

N-Formyl-L-kynurenine

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

selenate

sulfate

selenite

OH^-

molybdate

nitrate

hydrogensulfite

thiosulfate

hydrogencarbonate

sulfite

superoxide

selenide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

ammonium

K⁺

H⁺

Fe²⁺

Mn²⁺

Co²⁺

Mg²⁺

2-chloromaleylacetate

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

2-chloroacetate

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

pentachlorophenol

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

4-nitrophenol

paraoxon

parathion

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

2-nitrobenzoate

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

hydrogen cyanide

(indole-3-yl)acetonitrile

ethylphosphate

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

DNA with lesion

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

2-methoxy-6-(all-trans-octaprenyl)phenol

α-D-glucosamine 6-phosphate

(2S)-2-phospholactate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrinogen IX

uroporphyrinogen-III

Mg-protoporphyrin

protoporphyrin IX

protoheme

cob(I)alamin

adenosylcobalamin

adenosylcobyrate

adenosyl-cobinamide phosphate

cob(II)yrinate a,c-diamide

cobalt-precorrin-6A

cobalt-precorrin-5B

cobyrinate

cob(II)yrinate c-monoamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

phenylacetate

(glutathion-S-yl)-4-hydroxy-2-nonenal

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

(S)-2-hydroxyglutarate

(S)-ureidoglycine

4-methylphenol

L-homocysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

D-alanyl-D-lactate

hypoglycin B

L-α-amino-ε-keto-pimelate

carbamate

L-kynurenine

S-sulfanyl-L-cysteine

L-saccharopine

L-aspartyl-4-phosphate

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

N⁶,N⁶-dimethyl-L-arginine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L-asparagine

L-tyrosine

L-phenylalanine

L-cysteine

L-methionine

L-cystathionine

L-glutamate

L-serine

L-selenocysteine

L-lysine

L-isoglutamine

L-glutamine

L-ornithine

L-arginine

L-tryptophan

L-aspartate

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-alanine

L-valine

L-threonine

L-leucine

L-isoleucine

L-proline

L-histidine

D-ornithine

D-serine

D-lysine

D-glutamate

D-alanine

D-proline

creatine

β-alanine

(R)-β-lysine

(S)-3-amino-2-methylpropanoate

glycine

L-citrulline

L-dopa

L-homoserine

L-cystine

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

3-sulfino-L-alanine

L-canaline

hypoglycin A

1-aminocyclopropane-1-carboxylate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

decanoate

laurate

7-hydroxylaurate

octanoate

acetate

pyruvate

formate

propanoate

(S)-lactate

(R)-lactate

butanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

3-oxoadipate

cis-aconitate

trans-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(3E)-2-oxohex-3-enedioate

chorismate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

4-coumarate

2,3-dihydroxybenzoate

protocatechuate

salicylate

4-aminobenzoate

allantoate

gentisate

5-deoxy-D-glucuronate

orotate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

pristanate

leukotriene-D4

leukotriene-E4

(15Z)-tetracosenoate

palmitate

stearate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

oleate

phytenate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

linoleate

α-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(R)-3-hydroxybutanoate

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

salicylaldehyde

phlorisovalerophenone

erythronolide B

erythromycin D

3-α-mycarosylerythronolide B

4-prenylphlorisovalerophenone

deoxycohumulone

deoxyhumulone

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

(8S,9S,10S)-8,10-dimethyl-1-octalin

(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol

(-)-geosmin

all-trans-retinyl palmitate

all-trans-retinol

torulene

apo-4'-lycopenal

all-trans-3,4-didehydrolycopene

α-carotene

4'-apo-β-carotenal

zeinoxanthin

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

enterobactin

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

tributyrin

1,2-dibutyrin

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-(β-D ribofuranosyl)nicotinamide

sucrose

α,α-trehalose

maltopentaose

maltohexaose

maltotriose

maltotetraose

maltoheptaose

stachyose

raffinose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

methyl β-D-glucoside 6-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

arbutin-6-phosphate

salicin 6-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-β-L-mycarose

dTDP-D-desosamine

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

glycerol

β-D-fructofuranose

keto-D-fructose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

α-D-ribofuranose

glycolaldehyde

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

1-octanol

ethanol

methanol

hydroquinone

catechol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

phenylacetaldehyde

1-octanal

acetaldehyde

isobutanal

formaldehyde

methylglyoxal

diacetyl

acetone

4-hydroxyacetophenone

menadione

caldariellaquinone

cyanuric acid

2-hydroxylaminobenzoate

4-hydroxybenzoate

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-aminophenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

atrazine

trans-caffeate

2,3,5,6-tetrachlorohydroquinone

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

adenine

guanine

AMP

IMP

GMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

tetrahydromethanopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

FADH₂

FMNH₂

reduced riboflavin

FAD

FMN

riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

precorrin-3B

precorrin-6A

precorrin-1

precorrin-8x

precorrin-7

precorrin-6B

precorrin-5

precorrin-4

precorrin-3A

precorrin-2

isoguanine

uracil

cytosine

thymine

CDP

dCDP

UDP

dUDP

UTP

dCTP

CTP

dUTP

dTTP

dTDP

dUMP

dCMP

dTMP

5,6-dihydrouracil

5,6-dihydrothymine

5-fluorouracil

CMP

UMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-0

pppGpp

ppGpp

8-oxo-GTP

8-oxo-dGTP

adenylo-succinate

5'-deoxyadenosine

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-GMP

5-fluorocytosine

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

androsterone

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

campest-4-en-3-one

testosterone

17-β-hydroxy-5-α-androstan-3-one

cholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

5-α-pregnane-3,20-dione

7α-hydroxy-5β-cholestan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

5β-cholestane-3α,7α,12α-triol

lanosteryl oleate

ergosteryl oleate

cholest-5-en-3-one

cholesterol

lanosterol

ergosterol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

deoxycholate

3-dehydrocholate

cholate

trans-dienelactone

cis-dienelactone

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

succinyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

malonyl-CoA

(2R)-ethylmalonyl-CoA

(2S)-ethylmalonyl-CoA

benzoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-aminobutanoyl-CoA

choloyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

phytenoyl-CoA

phytanoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

16-hydroxypalmitoyl-CoA

palmitoyl-CoA

stearoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

decanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

octanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

S-(hydroxymethyl)glutathione

3-sulfopyruvate

L-cysteate

taurine

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

mycothiol

glutathione

deacetylmycothiol

S-sulfanylglutathione

betaine aldehyde

agmatine

spermidine

putrescine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

hydroxyl radical