an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

1-deoxy-L-glycero-tetrulose 4-phosphate

thiamine diphosphate

thiamine phosphate

(S)-3-methyl-2-oxopentanoate

L-gulono-1,4-lactone

(lipoyl)adenylate

3-methyl-2-oxobutanoate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

propanoyl phosphate

dethiobiotin

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

(S)-dihydroorotate

2-deoxy-D-glucose

2-deoxy-D-glucose 6-phosphate

N-ethylsuccinimide

N-ethylmaleimide

carbonic acid

3-hydroxypropanoate

2-aminoacetaldehyde

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

D-glycero-β-D-manno-heptose 1-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

3-dehydroshikimate

2-phosphoglycolate

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

γ-L-glutamyl 5-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-oxoglutaramate

acetoacetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

quinolinate

(S)-ureidoglycolate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

7-carboxy-7-deazaguanine

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

glutathioselenol

selenodiglutathione

octadecanal

3'-phosphoadenylyl-sulfate

adenosine 3',5'-bisphosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

prenyl diphosphate

S-ribosyl-L-homocysteine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

oxaloacetate

3-deoxy-D-arabino-heptulosonate 7-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

pimeloyl-CoA

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

lipid IV_A

lipid A disaccharide (E. coli)

3-deoxy-α-D-manno-2-octulosonate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

3-mercaptopyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

coproporphyrinogen III

O-acetyl-L-serine

hydrogen selenide

5-enolpyruvoyl-shikimate 3-phosphate

5-phospho-β-D-ribosylamine

acetyl phosphate

3-demethylubiquinol-6

oxalosuccinate

(S)-4-amino-5-oxopentanoate

nicotinate adenine dinucleotide

5-amino-6-(D-ribitylamino)uracil

anthranilate

N-(5-phosphoribosyl)-anthranilate

S-acetyldihydrolipoamide

4'-phosphopantetheine

β-D-ribosylnicotinate

autoinducer 2

4-amino-4-deoxychorismate

shikimate

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

α-D-glucosamine 1-phosphate

8-amino-7-oxononanoate

orotidine 5'-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

glycerone phosphate

canavaninosuccinate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-arginino-succinate

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,5-didehydro-D-gluconate

2-keto-D-gluconate

L-selenocystathionine

xanthine

urea

5-aminolevulinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

N-acetyl-L-glutamate 5-semialdehyde

3-dehydroquinate

shikimate 3-phosphate

salicyl alcohol

methylsalicylate

ethanolamine

hydroxypyruvate

glycolate

glutathione disulfide

(R)-2,3-dihydroxy-3-methylpentanoate

S-formylglutathione

hydrogen peroxide

preuroporphyrinogen

porphobilinogen

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

β-nicotinate D-ribonucleotide

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

(S)-2,3,4,5-tetrahydrodipicolinate

carboxyphosphate

carbamoyl phosphate

CO₂

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

dihydrolipoamide

citrate

S-adenosyl 3-(methylsulfanyl)propylamine

(R)-pantothenate

2-dehydropantoate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

phosphoenolpyruvate

2,3-didehydroadipyl-CoA

prephenate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

lipid X

2-C-methyl-D-erythritol 4-phosphate

(indol-3-yl)pyruvate

DNA without lesion

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(2R,3S)-3-methylmalate

citraconate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

L-canavanine

S-methyl-5'-thioadenosine

H₂O

3-deoxy-D-manno-octulosonate 8-phosphate

α-D-glucosamine 6-phosphate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-α-amino-ε-keto-pimelate

carbamate

L-citrulline

L-valine

L-proline

L-leucine

L-methionine

L-alanine

L-histidine

L-threonine

L-cysteine

L-tryptophan

L-asparagine

L-arginine

glycine

L-aspartate

L-glutamate

L-tyrosine

L-phenylalanine

L-lysine

L-serine

L-isoleucine

L-glutamine

L-canaline

L-cystine

S-adenosyl-L-homocysteine

L-homocysteine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

L-ornithine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

L-homoserine

S-adenosyl-L-methionine

O-phospho-L-homoserine

3-sulfino-L-alanine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenocysteine

S-sulfanyl-L-cysteine

2-hydroxy-5-oxoproline

seleno-L-homocysteine

L-aspartyl-4-phosphate

3-phospho-L-serine

N-α-acetyl lysine methyl ester

trans-4-hydroxy-L-proline

N⁶-acetyl-N⁶-hydroxy-L-lysine

N⁶-hydroxy-L-lysine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-methyl-L-tryptophan

N-carbamoyl-L-aspartate

L-cystathionine

L,L-diaminopimelate

D-serine

D-alanine

D-glutamate

β-alanine

pyruvate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

salicylate

4-aminobenzoate

allantoate

5-chloro-5-deoxy-D-ribonate

orotate

D-gluconate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

pristanate

7-hydroxylaurate

laurate

octanoate

decanoate

stearate

palmitate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

linoleate

α-linolenate

oleate

(15Z)-tetracosenoate

phytenate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

cis-aconitate

cis-2-methylaconitate

D-threo-isocitrate

chorismate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

acetamide

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

all-trans-retinyl palmitate

all-trans-retinol

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans-nonenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

1-18:1-2-18:1-phosphatidylethanolamine

dioleoyl phosphatidate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

UDP-α-D-galactose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

CMP-3-deoxy-β-D-manno-octulosonate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

α-D-galactose 1-phosphate

β-D-fructofuranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

sucrose 6^G-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

D-ribulose-1,5-bisphosphate

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

glycolaldehyde

keto-D-fructose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

ethanol

methanol

methylglyoxal

formaldehyde

acetaldehyde

menadione

caldariellaquinone

diacetyl

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

quercetin

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

ubiquinol-6

ubiquinol-10

ubiquinol-8

ubiquinol-9

ubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

adenine

guanine

XMP

AMP

IMP

GMP

ITP

ATP

GTP

IDP

ADP

GDP

dGDP

dADP

dIDP

dITP

dGTP

dATP

dGMP

dAMP

hypoxanthine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

xanthosine

guanosine

inosine

adenosine

FMNH₂

reduced riboflavin

riboflavin

FAD

FMN

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

7,8-dihydropteroate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

6-carboxy-5,6,7,8-tetrahydropterin

thymine

uracil

preQ₁

isoguanine

UDP

uridine 3'-monophosphate

dCDP

CDP

cytidine-3'-monophosphate

dUDP

dTDP

dTMP

dTTP

dCMP

dCTP

dUMP

dUTP

UTP

CTP

CMP

UMP

uridine

cytidine

2'-deoxycytidine

thymidine

2'-deoxyuridine

cob(II)alamin

aquacobalamin

sirohydrochlorin

precorrin-2

precorrin-1

(R)-lipoate

coenzyme A

5'-chloro-5'-deoxyadenosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

8-oxo-GTP

8-oxo-dGTP

adenylo-succinate

cyclic-AMP

pppGpp

ppGpp

5-chloro-5-deoxyribose 1-phosphate

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

NADP⁺

NAD⁺

NADPH

NADH

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5'-deoxy-5'-fluoroadenosine

heptadecane

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

D-glucono-1,5-lactone

malonyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

succinyl-CoA

acetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(S)-3-hydroxy-isobutanoyl-CoA

phytenoyl-CoA

crotonyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(3Z)-dodec-3-enoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

thiamine

nicotinate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

taurine

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

methanethiol

thiocyanate

S-sulfanylglutathione

glycine betaine

agmatine

spermine

putrescine

spermidine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

superoxide

hydroxyl radical

2-chloroacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

(S)-NADHX

(R)-NADHX

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-(all-trans-octaprenyl)benzene-1,2-diol

hydrogen cyanide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

Fe³⁺

Fe²⁺

Mo²⁺

Zn²⁺

Mg²⁺

K⁺

ammonium

H⁺

OH^-

selenite

sulfite

selenate

hydrogencarbonate

thiosulfate

sulfate

hydrogensulfite

chloride

phosphate

triphosphate

diphosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

2-iminosuccinate

2-iminobutanoate

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

DNA with lesion

acrylonitrile

preQ₀