an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,3-dioxo-L-gulonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

4-oxoglutaramate

dehydroascorbate (bicyclic form)

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

cyclic-2,3-O-oxalyl-L-threonate

aminoacetone

ammonia

1,4-dihydroxy-2-naphthoyl-CoA

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

oxidized DCPIP

reduced DCPIP

S-ribosyl-L-homocysteine

autoinducer 2

selenodiglutathione

glutathioselenol

glutathione disulfide

dialurate

(R)-1-amino-2-propanol O-2-phosphate

N-(5-phosphoribosyl)-anthranilate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

α-D-glucosamine 1-phosphate

citraconate

(2R,3S)-3-methylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

acetyl phosphate

(R)-mevalonate

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

2-hydroxy-5-carboxymethylmuconate semialdehyde

L-gulono-1,4-lactone

N⁵-carboxyaminoimidazole ribonucleotide

all-trans-13,14-dihydroretinol

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

L-dehydro-ascorbate

O-ureido-L-homoserine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

L-arginino-succinate

canavaninosuccinate

(S)-2,3,4,5-tetrahydrodipicolinate

5-carboxymethyl-2-hydroxymuconate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

3-deoxy-α-D-manno-2-octulosonate

L-selenocystathionine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

orotidine 5'-phosphate

lipid A disaccharide (E. coli)

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

L-canavanine

urea

carboxyphosphate

lipid IV_A

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

prephenate

4-fumaryl-acetoacetate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

4-amino-4-deoxychorismate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

5-enolpyruvoyl-shikimate 3-phosphate

porphobilinogen

preuroporphyrinogen

carbonic acid

3-hydroxypropanoate

3-oxopropanoate

chloramphenicol

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

(S)-mandelate

(R)-mandelate

1,4-dihydroxy-2-naphthoate

3-phosphooxypyruvate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

pinocembrin chalcone

isoquinoline

isoquinolin-2(1H)-one

formamide

4-imidazolone-5-propanoate

urocanate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

histidinal

carbamoyl phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

shikimate 3-phosphate

acetoacetate

4-methyl-2-oxopentanoate

isopentenyl diphosphate

prenyl diphosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

7-carboxy-7-deazaguanine

anthranilate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

xanthine

(S)-2-amino-6-oxohexanoate

2-dehydropantoate

2-iminoacetate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

nicotinate adenine dinucleotide

dethiobiotin

pimeloyl-CoA

N²-succinylglutamate

DNA without lesion

4-maleyl-acetoacetate

homogentisate

(2-hydroxyphenyl)acetate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

N-Formyl-L-kynurenine

glycolate

5-amino-6-(D-ribitylamino)uracil

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

lipid X

N-ethylmaleimide

N-ethylsuccinimide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

thiamine phosphate

thiamine diphosphate

hydrogen peroxide

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

glycerone phosphate

β-D-ribosylnicotinate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

(R)-pantothenate

(R)-4'-phosphopantothenate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

shikimate

3-dehydroshikimate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

citrate

oxalosuccinate

coproporphyrinogen III

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

histamine

β-nicotinate D-ribonucleotide

quinolinate

hydrogen selenide

O-acetyl-L-serine

L-histidinol phosphate

histidinol

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

3-hydroxyanthranilate

2-amino-3-carboxymuconate-6-semialdehyde

(S)-dihydroorotate

oxaloacetate

CO₂

phosphoenolpyruvate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

H₂O

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

hydrogen cyanide

adenosylcobyrate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(I)alamin

adenosylcobalamin

Mg-protoporphyrin

protoheme

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

siroheme

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

(R)-glycerate

3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ω-saturated C55 dolichol phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(R)-citramalate

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

chloramphenicol 3-acetate

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

demethylmenaquinol-8

caldariellaquinone

NADPH

NADH

NADP⁺

NAD⁺

glycine betaine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

Fe³⁺

ammonium

H⁺

Mg²⁺

Fe²⁺

sulfate

hydrogensulfite

OH^-

selenite

molybdate

selenate

sulfite

thiosulfate

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

putrescine

cadaverine

betaine aldehyde

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

urate

4-hydroxybenzoate

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

kaempferol

quercetin

myricetin

(+)-taxifolin

2',4,4',6'-tetrahydroxychalcone

isoliquiritigenin

(+)-dihydrokaempferol

(+)-dihydromyricetin

(2S)-pinocembrin

(2S)-liquiritigenin

(2S)-naringenin

2,3-dihydroxybenzoate

protocatechuate

3,4-dihydroxyphenylacetate

4-aminobenzoate

preQ₀

molybdopterin

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

MoO₂-molybdopterin cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

nicotinate

riboflavin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

solasodine 3-O-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

ergosterol 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

β-sitosterol 3-O-β-D-glucoside

cholesteryl-β-D-glucoside

solasodine

ergosterol

cholesterol

D-glucono-1,5-lactone

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

isovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

phenylacetyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

acetyl-CoA

malonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

2-hydroxyphytanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

6-aminopenicillanate

isopenicillin N

penicillin G

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

chorismate

L-aspartate

succinate

fumarate

(S)-malate

3-carboxy-cis,cis-muconate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

propanoate

formate

pyruvate

acetate

(R)-lactate

laurate

stearate

palmitate

D-gluconate

orotate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

carbamate

L-kynurenine

L-serine

β-alanine

L-leucine

L-alanine

L-proline

glycine

L-glutamine

D-glutamate

L-glutamate

L-arginine

L-lysine

L-histidine

L-tyrosine

L-tryptophan

L-phenylalanine

cis-4-hydroxy-D-proline

D-proline

D-aspartate

D-alanine

seleno-L-homocysteine

L-saccharopine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

3-phospho-L-serine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-methionine

L-cysteine

L-isoglutamine

L-valine

L,L-diaminopimelate

L-cystathionine

L-asparagine

L-isoleucine

L-ornithine

L-threonine

L-selenocysteine

L-citrulline

hypoglycin A

1-aminocyclopropane-1-carboxylate

L-canaline

L-homoserine

O-succinyl-L-homoserine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

S-sulfo-L-cysteine

S-adenosyl-L-methionine

meso-diaminopimelate

(3R)-3-isopropenyl-6-oxoheptanoate

(3S)-3-isopropenyl-6-oxoheptanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

hypoglycin B

ethanol

methanol

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

stigmasterol

brassicasterol

sitosterol

geranyl diphosphate

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

trans,octacis-decaprenyl phosphate

antheraxanthin

violaxanthin

zeaxanthin

(+)-(1S,4R)-limonene-1,2- epoxide

(1S,4R)-1-hydroxymenth-8-en-2-one

(1R,4S)-1-hydroxymenth-8-en-2-one

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

α-Kdo-(2→6)-lipid IV_A

phlorisovalerophenone

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

1-(β-D ribofuranosyl)nicotinamide

α,α-trehalose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-glyceraldehyde

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

ADP-α-D-glucose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-arabinofuranose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

L-gulonate

diacetyl

methylglyoxal

(R)-acetoin

formaldehyde

acetaldehyde

precorrin-3B

precorrin-4

precorrin-2

precorrin-1

sirohydrochlorin

dCMP

dTDP

dTTP

dUDP

CDP

dCDP

uracil

dTMP

dUMP

UDP

dUTP

UTP

dCTP

CTP

CMP

UMP

uridine

cytidine

2'-deoxycytidine

thymidine

2'-deoxyuridine

hypoxanthine

adenine

guanine

isoguanine

preQ₁

inosine

adenosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

ITP

GTP

ATP

IDP

GDP

ADP

GMP

AMP

IMP

XMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

dAMP

dGMP

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

(6R)-4a-hydroxy-tetrahydrobiopterin

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA