an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N-methylhydantoin

creatinine

maleamate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(3-hydroxyphenyl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

vanillin

itaconate

pyruvic oxime

protoanemonin

2-keto-L-gulonate

autoinducer 2

S-ribosyl-L-homocysteine

4-oxoglutaramate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

CO₂

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

porphobilinogen

5-aminolevulinate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

5-dehydro-D-gluconate

phosphoenolpyruvate

oxaloacetate

4-maleyl-acetoacetate

homogentisate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

cyanate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

1-deoxy-L-glycero-tetrulose 4-phosphate

formate

γ-L-glutamyl 5-phosphate

(S)-4-amino-5-oxopentanoate

carbamoyl phosphate

(S)-dihydroorotate

S-formylglutathione

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

glycerone phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

succinate semialdehyde

urea

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

carboxyphosphate

α-D-glucosamine 1-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

L-canavanine

canavaninosuccinate

L-arginino-succinate

nicotinate adenine dinucleotide

2,5-didehydro-D-gluconate

2-keto-D-gluconate

L-histidinol phosphate

imidazole acetol-phosphate

betaine aldehyde

3-ureidopropanoate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

5-enolpyruvoyl-shikimate 3-phosphate

hydroxypyruvate

citrate

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

oxalosuccinate

histidinol

histidinal

orotidine 5'-phosphate

acetoacetate

anthranilate

N-(5-phosphoribosyl)-anthranilate

urocanate

4-imidazolone-5-propanoate

N-acetyl-L-glutamate 5-semialdehyde

quinolinate

β-nicotinate D-ribonucleotide

(S)-ureidoglycolate

5-methylsalicylate

4-methylsalicylate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

hydroxylamine

ammonia

DNA without lesion

4-hydroxy-2-nonenal

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

tartronate semialdehyde

2-aminoacetaldehyde

shikimate 3-phosphate

shikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

pimeloyl-CoA

pimelate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

hydrogen peroxide

L-selenocystathionine

5-oxo-L-proline

oxalate

3-oxopropanoate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

ethanolamine

2-oxoadipate

acetyl phosphate

7-carboxy-7-deazaguanine

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

(2R,3S)-3-methylmalate

citraconate

β-D-ribosylnicotinate

4-methyl-3-oxoadipate

3-dehydroshikimate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-dehydropantoate

2-pyrone-4,6-dicarboxylate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

L-gulono-1,4-lactone

4-chlorobenzoate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4'-phosphopantetheine

5-amino-6-(D-ribitylamino)uracil

thiamine diphosphate

thiamine phosphate

2-arylpropanoate

2-aryl-2-methylmalonate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

cis,cis-muconate

2,5-dihydroxypyridine

6-hydroxynicotinate

N-formylmaleamate

(S)-2-amino-6-oxohexanoate

norspermidine

carboxynorspermidine

carbonic acid

muconolactone

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

(+)-muconolactone

3-phosphonopyruvate

(2-hydroxyphenyl)acetate

methylsalicylate

salicyl alcohol

N-acetylglutamyl-phosphate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

dethiobiotin

N⁵-carboxyaminoimidazole ribonucleotide

2-maleylacetate

(S)-5-amino-3-oxohexanoate

3-hydroxyanthranilate

cis-3,4-dehydroadipyl-CoA semialdehyde

2,3-epoxy-2,3-dihydrobenzoyl-CoA

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

(E)-glutaconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

glycolate

2-C-methyl-D-erythritol 4-phosphate

propanoyl phosphate

N-Formyl-L-kynurenine

2-phosphoglycolate

prephenate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

5-amino-6-(5-phospho-D-ribitylamino)uracil

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2'-hydroxypseudobaptigenin

(3R)-sophorol

2-hydroxyformononetin

4-amino-4-deoxychorismate

lipid A disaccharide (E. coli)

lipid X

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

5-carboxymethyl-2-hydroxymuconate

preuroporphyrinogen

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

ectoine

(2S)-4-acetamido-2-aminobutanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-hydroxy-5-carboxymethylmuconate semialdehyde

(R)-mandelate

(S)-mandelate

N-succinyl-L,L-2,6-diaminopimelate

(R)-4'-phosphopantothenate

(R)-4-phosphopantoate

3-deoxy-α-D-manno-2-octulosonate

O-ureido-L-homoserine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3-deoxy-D-manno-octulosonate 8-phosphate

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

N²-succinylglutamate

2-iminoacetate

O-acetyl-L-serine

(R)-pantothenate

(R)-mevalonate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

coproporphyrinogen III

formamide

(lipoyl)adenylate

lipid IV_A

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

glutathione disulfide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

D-erythro-imidazole-glycerol-phosphate

3-mercaptopyruvate

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

D-gluconate 6-phosphate

propan-2-ol

hydrogen selenide

glutathioselenol

selenodiglutathione

4-fumaryl-acetoacetate

4-aminobutanoate

2-oxopent-4-enoate

2-amino-3-carboxymuconate-6-semialdehyde

trans-2,3-dehydroadipyl-coA

cis-3,4-dehydroadipyl-CoA

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

L-α-amino-ε-keto-pimelate

carbamate

L-2-aminoadipate

L-kynurenine

L-citrulline

L-cysteine

L-methionine

L-aspartate

L-tryptophan

L-serine

glycine

L-proline

L-glutamate

L-tyrosine

L-asparagine

L-glutamine

L-arginine

L-phenylalanine

L-alanine

L-threonine

L-leucine

L-histidine

L-lysine

L-isoleucine

L-valine

L-homocysteine

L-ornithine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

hypoglycin A

L-canaline

3-sulfino-L-alanine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenomethionine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L-isoglutamine

L-2,4-diaminobutanoate

L-cystathionine

L,L-diaminopimelate

D-alanine

D-glutamate

N-carbamoylsarcosine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

salicylate

protocatechuate

vanillate

trans-cinnamate

2,3-dihydroxybenzoate

4-aminobenzoate

gentisate

5-deoxy-D-glucuronate

acetate

D-gluconate

orotate

5-chloro-5-deoxy-D-ribonate

(R)-pantoate

allantoate

(S)-1-pyrroline-5-carboxylate

pristanate

7-hydroxylaurate

laurate

octanoate

decanoate

stearate

palmitate

arachidate

myristate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

phytenate

oleate

(15Z)-tetracosenoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(R)-lactate

(R)-glycerate

(R)-2-hydroxyglutarate

(R)-3-hydroxybutanoate

propanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

(3E)-2-oxohex-3-enedioate

D-galactarate

α,ω-9Z-octadecenedioate

D-glucarate

maleate

fumarate

succinate

(S)-malate

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

acetamide

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

all-trans-retinyl palmitate

all-trans-retinol

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

enterobactin

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

L-idonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

D-glyceraldehyde

α-L-arabinopyranose

α-D-ribofuranose

glycolaldehyde

keto-D-fructose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

L-iditol

D-sorbitol

4-methylcatechol

4-chlorocatechol

catechol

3,4-dihydroxyphenylacetate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 4-monophosphate

phytate

D-myo-inositol (1,2,3,5,6) pentakisphosphate

1-octanol

ethanol

methanol

3-(N-morpholino)propanal

methylglyoxal

1-octanal

butan-1-al

acetaldehyde

formaldehyde

menadione

caldariellaquinone

diacetyl

acetone

toluene

benzene

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

2-hydroxylaminobenzoate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

quercetin

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

4-chlorosalicylate

5-chlorosalicylate

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

(3R)-vestitone

adenine

AMP

GMP

XMP

IMP

GTP

ATP

ITP

GDP

ADP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyguanosine

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

tetrahydromethanopterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

cyclic pyranopterin phosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

MoO₂-molybdopterin cofactor

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

thymine

preQ₁

isoguanine

dUTP

dCTP

UTP

CTP

dTDP

dTMP

dUDP

CDP

dCDP

UDP

dTTP

5,6-dihydrouracil

5,6-dihydrothymine

dUMP

dCMP

UMP

CMP

cytidine

uridine

2'-deoxyuridine

2'-deoxycytidine

hydantoin

adenosylcobalamin

coenzyme A

(R)-lipoate

8-oxo-GTP

8-oxo-dGTP

adenylo-succinate

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

pppGpp

cyclic-AMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

2-hydroxy-dATP

5-hydroxy-CMP

5-hydroxy-CTP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

cob(I)alamin

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

cholate

glycocholate

methane

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

acetyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

itaconyl-CoA

oxalyl-CoA

formyl-CoA

(3S)-citryl-CoA

(+)-7-epi-jasmonoyl-CoA

4-chlorobenzoyl-coA

3'-dephospho-CoA

gentisyl-CoA

salicyl-CoA

anthraniloyl-CoA

(S)-3-aminobutanoyl-CoA

4-hydroxybenzoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

dihomo γ-linolenoyl-CoA

3-methylglutaconyl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

benzoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxooctadecanoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

icosanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3S)-citramalyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

sulfoacetaldehyde

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

methanethiol

thiocyanate

cadaverine

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

hydrogensulfite

sulfate

hydrogencarbonate

sulfite

nitrite

nitrate

selenate

OH^-

selenite

molybdate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Mo²⁺

Zn²⁺

Mn²⁺

Ni²⁺

Fe²⁺

ammonium

H⁺

K⁺

2-chloroacetate

3-chloro-cis,cis-muconate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

acrylonitrile

preQ₀

hydrogen cyanide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(R)-citramalate

(S)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrinogen IX

hemin

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

phosphonoacetaldehyde

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal