an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

CO₂

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

citrate

oxaloacetate

8-amino-7-oxononanoate

pimeloyl-CoA

carboxyphosphate

carbamoyl phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-histidinol phosphate

histidinol

histidinal

α-D-glucosamine 1-phosphate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

(R)-4'-phosphopantothenate

(R)-pantothenate

N-acetylglutamyl-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(S)-2,3,4,5-tetrahydrodipicolinate

phosphoenolpyruvate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

glycerone phosphate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

isopentenyl diphosphate

γ-L-glutamyl 5-phosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

3-phosphooxypyruvate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

quinolinate

xanthine

5-phospho-β-D-ribosylamine

S-acetyldihydrolipoamide

dihydrolipoamide

prenyl diphosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

3-methyl-2-oxobutanoate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(E)-3-(methoxycarbonyl)pent-2-enedioate

H₂

N-(5-phosphoribosyl)-anthranilate

5'-phosphoguanylyl(3'→5')guanosine

N¹-(5-phospho-β-D-ribosyl)glycinamide

2-C-methyl-D-erythritol 4-phosphate

O-acetyl-L-serine

3'-phosphoadenylyl-sulfate

tartronate semialdehyde

L-selenocystathionine

coproporphyrinogen III

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-glucuronide

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

shikimate 3-phosphate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

acetyl phosphate

3-dehydroshikimate

6-phospho D-glucono-1,5-lactone

hydrogen selenide

anthranilate

1-methylnicotinamide

thiamine diphosphate

glycolate

2-phosphoglycolate

(S)-dihydroorotate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

oxalosuccinate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

N-Formyl-L-kynurenine

nicotinate adenine dinucleotide

urea

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

DNA without lesion

orotidine 5'-phosphate

hydrogen peroxide

coenzyme F₃₉₀-A

ManNAc-GlcNAc-PP-undecaprenol

propanoyl phosphate

norspermidine

carboxynorspermidine

(S)-2-amino-6-oxohexanoate

2-iminoacetate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

S-methyl-5'-thioinosine

3-ureidopropanoate

acetoacetate

L-canavanine

4-amino-4-deoxychorismate

L-β-lysine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

autoinducer 2

S-ribosyl-L-homocysteine

3-hydroxypropanal

N-acetyl-D-muramate 6-phosphate

crotonate

1,4-dihydroxy-2-naphthoate

ethanolamine

dihydroxyacetone

CDP-glycerol

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

(S)-2,3-dihydrodipicolinate

creatinine

hydroxypyruvate

quercitrin

salicyl alcohol

1,6-anhydro-N-acetyl-β-muramate

prephenate

glutathione disulfide

1,3-propanediol

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-amino-3-carboxymuconate-6-semialdehyde

(4-hydroxyphenyl)acetate

glutathioselenol

selenodiglutathione

1-piperideine 6-carboxylate

aminoacetone

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-citrulline

L-alanine

glycine

L-glutamate

L-glutamine

L-proline

L-lysine

L-histidine

L-asparagine

L-arginine

L-aspartate

L-tryptophan

L-phenylalanine

L-isoleucine

L-serine

L-threonine

L-tyrosine

L-valine

L-leucine

L-cysteine

L-methionine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homocysteine

O-succinyl-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

L-ornithine

S-sulfo-L-cysteine

L-canaline

O-phospho-L-homoserine

L-selenocysteine

meso-diaminopimelate

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

N-carbamoylglycine

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L,L-diaminopimelate

L-cystathionine

D-phenylalanine

D-alanine

D-glutamate

D-aspartate

creatine

(R)-β-lysine

β-alanine

(R)-3-amino-2-methylpropanoate

2,3-dihydroxybenzoate

4-aminobenzoate

acetate

D-mannonate

orotate

5-chloro-5-deoxy-D-ribonate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

4-deoxy-L-threo-hex-4-enopyranuronate

aldehydo-D-galacturonate

β-D-glucuronate

pristanate

7-hydroxylaurate

laurate

octanoate

decanoate

stearate

palmitate

butanoate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

sophorosyloxydocosanoate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

phytenate

oleate

(15Z)-tetracosenoate

linoleate

α-linolenate

(S)-lactate

(R)-lactate

(R)-glycerate

pyruvate

formate

propanoate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

cis-aconitate

(2S,3S)-2-methylcitrate

trans-aconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

α,ω-9Z-octadecenedioate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

(S)-malate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

nicotinamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

cephalosporin C

deacetylcephalosporin C

phlorisovalerophenone

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

iron(III) dicitrate

ferric-enterobactin complex

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

arbutin-6-phosphate

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

p-nitrophenyl-α-L-rhamnopyranoside

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-L-rhamnopyranose

α-L-rhamnopyranose

β-L-fucopyranose

α-L-fucopyranose

β-D-fructofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-D-ribofuranose

glycolaldehyde

keto-D-fructose

keto-L-rhamnulose

D-xylulose

D-ribulose

L-ribulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

D-sorbitol 6-phosphate

sucrose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

β-D-cellobiose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

maltotriose

cellotetraose

stachyose

unsaturated gellan tetrasaccharide

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

selaginose

XXXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

hydroquinone

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

(S)-propane-1,2-diol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

butan-1-ol

ethanol

propan-1-ol

methanol

methylglyoxal

(S)-lactaldehyde

acetaldehyde

1-propanal

butan-1-al

formaldehyde

menadione

diacetyl

4-hydroxybenzoate

urate

luteolin

quercetin

quercetin-3-glucoside

rutin

hesperidin

hesperitin-7-O-β-D-glucoside

prunin

naringin

menadiol

demethylmenaquinol-8

4-nitrophenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

adenine

guanine

AMP

IMP

XMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dGTP

dATP

hypoxanthine

xanthosine

guanosine

inosine

adenosine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

FMNH₂

reduced riboflavin

FAD

FMN

riboflavin

thymine

uracil

preQ₁

isoguanine

CTP

UTP

dUMP

dUTP

UDP

CDP

dCDP

dUDP

dTDP

dTMP

dCTP

dCMP

5,6-dihydrothymine

5,6-dihydrouracil

dTTP

dipicolinate

UMP

CMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

hydantoin

adenosylcobalamin

cob(I)alamin

coenzyme A

oxidized coenzyme F₄₂₀-2

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-AMP

ppGpp

pppGpp

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

5'-deoxy-5'-fluoroadenosine

(S)-NADHX

(R)-NADHX

thiamine

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

ethene

phenylacetate

(+)-7-epi-jasmonate

acetyl-CoA

phenylacetyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

succinyl-CoA

isobutanoyl-CoA

malonyl-CoA

4-hydroxybenzoyl-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

(+)-7-epi-jasmonoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

pristanoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

18-hydroxylinoleoyl-CoA

phytenoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

S-(hydroxymethyl)glutathione

glutathione

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

agmatine

spermidine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

hydrogencarbonate

selenate

nitrite

thiosulfate

OH^-

selenite

sulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Mg²⁺

Fe²⁺

ammonium

H⁺

2-chloroacetate

4-nitrophenyl phosphate

preQ₀

(R)-citramalate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

2-iminosuccinate

2-iminobutanoate

hydrogen sulfide

oxygen

protoporphyrinogen IX

Mg-protoporphyrin

protoporphyrin IX

uroporphyrinogen-III

protoheme

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

N₂

ethylphosphate

DNA with lesion