an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

5-hydroxyindole thiazolidine carboxylate

(2E)-2-hydroxypenta-2,4-dienoate

5,6-dihydroxyindole

ammonia

enol-phenylpyruvate

S-(hydroxymethyl)mycothiol

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

picolinate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

1-piperideine 6-carboxylate

selenodiglutathione

glutathioselenol

chloroacetaldehyde

N-ethylammelide

2-dehydro-3-deoxy-D-galactonate 6-phosphate

S-ribosyl-L-homocysteine

autoinducer 2

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(S)-4-hydroxy-2-oxohexanoate

(R)-synephrine

octopamine

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

2,6-dioxo-6-phenylhexa-3-enoate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

oxidized DCPIP

reduced DCPIP

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

L-dopachrome

shikimate

5-aminopentanoate

(2R,4S)-2, 4-diaminopentanoate

dialurate

(R)-1-amino-2-propanol O-2-phosphate

isopropylamine

(2Z,4E)-2-aminomuconate

malonate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-deoxy-α-ribose 1-phosphate

barbiturate

ureidomalonate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(R)-3-methylitaconate

dimethylmaleate

2-protocatechuoylphloroglucinolcarboxylate

2,5-dioxopentanoate

α-D-glucosamine 1-phosphate

2-hydroxy-cyclohexane-1-carbonyl-CoA

2-ketocyclohexane-1-carbonyl-CoA

hydroxyatrazine

N-isopropylammelide

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-ureidoglycolate

3-methylmuconolactone

muconolactone

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

1,4-dihydroxy-2-naphthoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

selenophosphate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

D-erythro-imidazole-glycerol-phosphate

orotidine 5'-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-phospho-β-D-ribosylamine

4,5-dihydroxyphthalate

S-adenosyl 3-(methylsulfanyl)propylamine

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

thiamine diphosphate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

(2E,4E)-2-amino-5-chloro-6-oxohexa-2,4-dienoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

mycothione

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prephenate

glutathionylspermidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

N-ethylglycine

ethylamine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(2S)-4-acetamido-2-aminobutanoate

ectoine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

2,3-epoxy-2,3-dihydrobenzoyl-CoA

cis-3,4-dehydroadipyl-CoA semialdehyde

cyclohexanone

ε-caprolactone

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

(2R)-2-amino-4-oxopentanoate

porphobilinogen

4-fumaryl-acetoacetate

hydroxypyruvate

4-hydroxylaminobenzoate

3-oxopropanoate

4-aminobutanoate

(S)-2,3,4,5-tetrahydrodipicolinate

(2S)-lactyl-2-diphospho-5'-guanosine

3-methyl-2-butenal

squalene

hop-22(29)-ene

D-erythritol 4-phosphate

(2-hydroxyphenyl)acetate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

L-gulono-1,4-lactone

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

(R)-10-Hydroxystearate

3-phosphooxypyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

nicotinate adenine dinucleotide

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(lipoyl)adenylate

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

3-mercaptopyruvate

4-prenylphlorisobutyrophenone

prenyl diphosphate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-6-(D-ribitylamino)uracil

DNA without lesion

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

phthalate

phthalate 4,5-cis-dihydrodiol

(4-hydroxyphenyl)acetate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

N-methylhydantoin

N-Formyl-L-kynurenine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

3-maleylpyruvate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

3-hydroxyanthranilate

3-(2,3-dihydroxyphenyl)propanoate

3-methylgentisate

4-methylgentisate

cis,cis-muconate

(R)-pantothenate

(R)-4'-phosphopantothenate

ethanolamine

tryptamine

5-hydroxyindole acetaldehyde

3,4-dihydroxyphenylacetaldehyde

methylamine

4-acetamidobutanal

5-methoxytryptamine

5-methoxyindoleacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

2-dehydropantoate

2-dehydro-3-deoxy-D-galactonate

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

butyramide

2-amino-3-carboxymuconate-6-semialdehyde

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

phosphonoacetate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

creatinine

2-hydroxy-5-carboxymethylmuconate semialdehyde

2,4'-dihydroxyacetophenone

nicotine-1'-N-oxide

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

salicyl alcohol

methylsalicylate

(L-seryl)adenylate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(4S)-4-hydroxy-2-oxoheptanedioate

(S)-mandelate

(R)-mandelate

5-dehydro-4-deoxy-D-glucarate

deethylsimazine

N-ethylammeline

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-deoxy-D-arabino-heptulosonate 7-phosphate

2-aminoacetaldehyde

formamide

acetyl phosphate

citraconate

(2R,3S)-3-methylmalate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-oxo-L-proline

diethylthiophosphate

diethylphosphate

dimethylthiophosphate

3-hydroxy-1H-quinolin-4-one

carbon monoxide

N-formylanthranilate

urea-1-carboxylate

xanthine

2-succinylbenzoate

L-canavanine

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

coproporphyrinogen III

3-ureidopropanoate

5-methylsalicylate

4-methylsalicylate

carbonic acid

3-phosphonopyruvate

2-maleylacetate

2,3,5,6-tetracholorophenol

glycolate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

oxalate

4-amino-4-deoxychorismate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

tartronate semialdehyde

γ-L-glutamyl 5-phosphate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

succinate semialdehyde

urea

dethiobiotin

hydrogen peroxide

β-nicotinate D-ribonucleotide

quinolinate

imidazole acetol-phosphate

L-histidinol phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

hydrogenobyrinate a,c-diamide

(E)-3-(methoxycarbonyl)pent-2-enedioate

isopentenyl diphosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

glycerone phosphate

glutathione disulfide

acetoacetate

hydrogen selenide

O-acetyl-L-serine

preuroporphyrinogen

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

oxalosuccinate

histidinal

histidinol

urocanate

4-imidazolone-5-propanoate

4-methyl-2-oxopentanoate

3-dehydroquinate

3-dehydroshikimate

(S)-dihydroorotate

carbamoyl phosphate

carboxyphosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

citrate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(S)-2-amino-6-oxohexanoate

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

1,2-dichloroethane

2-chloroethanol

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

hydrogenobyrinate

isochorismate

(L-aspartyl)adenylate

(2,3-dihydroxybenzoyl)adenylate

5-methylcytosine

homogentisate

4-maleyl-acetoacetate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

H₂O

oxaloacetate

CO₂

phosphoenolpyruvate

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

phosphonoacetaldehyde

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

adenosylcobyrate

adenosyl-cobinamide phosphate

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(I)yrinate a,c-diamide

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cobyrinate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cob(II)yrinate a,c-diamide

protoheme

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

hydrogen sulfide

oxygen

4-(2-iminoethyl)phenol

4-[(2Z)-2-(methylimino)ethyl]phenol

2-iminobutanoate

2-iminosuccinate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

(R)-glycerate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

(indole-3-yl)acetonitrile

3-cyanopyridine

propionitrile

acrylonitrile

n-butyronitrile

2-nitrobenzoate

parathion

paraoxon

4-nitrophenol

N-acetyl-β-neuraminate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-chloromaleylacetate

3-chloro-cis,cis-muconate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,5-dichlorophenol

3-chlorobenzoate

2-amino-5-chlorophenol

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

pentachlorophenol

Fe³⁺

ammonium

H⁺

Mg²⁺

Fe²⁺

Co²⁺

sulfate

hydrogensulfite

selenite

OH^-

selenide

molybdate

superoxide

sulfite

selenate

thiosulfate

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

glycine betaine

betaine aldehyde

4-[(Z)-2-aminoethenyl]phenol

4-[(E)-2-(methylamino)ethenyl]phenol

(2Z)-2-aminobut-2-enoate

agmatine

N-acetylputrescine

spermidine

cadaverine

putrescine

3-acetylamino-4-hydroxybenzoate

3-acetylamino-4-hydroxybenzaldehyde

tyramine

2-phenylethylamine

3-amino-4-hydroxybenzoate

3-amino-4-hydroxybenzaldehyde

serotonin

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

deacetylmycothiol

mycothiol

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

sulfoacetaldehyde

L-cysteate

3-sulfopyruvate

sulfoacetate

dodecyl sulfate

3-sulfino-L-alanine

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

VAI-1

AAI-1

PAI-1-2

PAI-1

VAI-1-2

HAI-1

D-glucono-1,5-lactone

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

phenylacetyl-CoA

4-hydroxybutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

benzoyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

anthraniloyl-CoA

salicyl-CoA

gentisyl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5Z)-tetradecenoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

choloyl-CoA

(3S)-citryl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

formyl-CoA

oxalyl-CoA

malonyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

phytanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

cholest-4-en-3-one

cholest-dien-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

5-α-pregnane-3,20-dione

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

deoxycholate

cholate

3-dehydrocholate

androsterone

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

cholest-5-en-3-one

cholesterol

17-β-hydroxy-5-α-androstan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

campest-4-en-3β-ol

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

campest-4-en-3-one

5α-androstane-3,17-dione

testosterone

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

nicotinate

riboflavin

nicotinamide

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FADH₂

FAD

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

isoguanine

8-oxo-dGTP

8-oxo-GTP

pppGpp

ppGpp

dIDP

dITP

2'-deoxyguanosine

dGMP

dAMP

2'-deoxyadenosine

2'-deoxyinosine

cyclic-AMP

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

GMP

XMP

5'-deoxyadenosine

dATP

dGTP

adenylo-succinate

IMP

dADP

ADP

dGDP

ATP

AMP

GTP

GDP

ITP

IDP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

adenosine

inosine

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

CTP

UTP

dCMP

dUMP

dTMP

CMP

UMP

dTDP

dUDP

dCDP

UDP

CDP

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

GDP-α-D-glucose

GDP-α-D-mannose

ADP-α-D-glucose

thymine

cytosine

uracil

guanine

adenine

5,6-dihydrouracil

5,6-dihydrothymine

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-O-demethyl-β-L-noviose

dTDP-4-dehydro-5-methyl-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

(S)-1-pyrroline-5-carboxylate

1-piperideine

precorrin-1

precorrin-2

precorrin-6A

precorrin-3B

precorrin-3A

precorrin-4

precorrin-5

precorrin-6B

precorrin-7

precorrin-8x

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

orotate

quercetin

cyanuric acid

2-hydroxylaminobenzoate

4-hydroxyacetophenone

biphenyl

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

urate

4-hydroxybenzoate

atrazine

metanephrine

normetanephrine

amino-parathion

methyl parathion

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-aminophenol

hydroquinone

biphenyl-2,3-diol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

L-dopa

dopamine

(R)-adrenaline

(R)-noradrenaline

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

catechol

4-methylcatechol

protocatechuate

2,3-dihydroxybenzoate

enterobactin

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

2,3,5,6-tetrachlorohydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

trans-cinnamate

salicylate

4-aminobenzoate

benzoate

3-hydroxybenzoate

3-hydroxy-5-methyl-benzoate

3-hydroxy-4-methyl-benzoate

diacetyl

acetone

dopaquinone

(S)-acetoin

(R)-acetoin

methylglyoxal

glycolaldehyde

1-octanal

1-propanal

butan-1-al

formaldehyde

acetaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-ribofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

β-D-galactopyranose

α-D-galactopyranose

hydroxyquinol

butan-1-ol

methanol

ethanol

phytol

1-dodecanol

1-octanol

glycerol

erythritol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1D-myo-inositol 4-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 3-monophosphate

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

keto-L-rhamnulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

D-gluconate

L-gulonate

D-galactonate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

(-)-geosmin

(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol

(8S,9S,10S)-8,10-dimethyl-1-octalin

geranyl diphosphate

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

trans,octacis-decaprenyl phosphate

torulene

apo-4'-lycopenal

4'-apo-β-carotenal

all-trans-3,4-didehydrolycopene

(+)-(1S,4R)-limonene-1,2- epoxide

(1S,4R)-1-hydroxymenth-8-en-2-one

(1R,4S)-1-hydroxymenth-8-en-2-one

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

phlorisovalerophenone

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

leucodopachrome

(S)-nicotine

6-aminopenicillanate

isopenicillin N

penicillin G

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

allantoate

acetamide

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

(3E)-2-oxohex-3-enedioate

chorismate

L-aspartate

succinate

fumarate

(S)-malate

D-glucarate

D-galactarate

α,ω-9Z-octadecenedioate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

trans-aconitate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

(3R)-3-isopropenyl-6-oxoheptanoate

(3S)-3-isopropenyl-6-oxoheptanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

octanoate

7-hydroxylaurate

laurate

decanoate

4-hydroxybutanoate

gentisate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

α-linolenate

linoleate

oleate

stearate

palmitate

di-homo-γ-linolenate

phytenate

5-deoxy-D-glucuronate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

carbamate

L-serine

L-cysteine

L-tyrosine

L-asparagine

L-threonine

L-glutamine

glycine

L-arginine

L-histidine

L-lysine

L-glutamate

L-methionine

L-alanine

L-proline

L-phenylalanine

L-selenocysteine

L-valine

L-isoleucine

L-leucine

L-tryptophan

N-carbamoylsarcosine

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

D-glutamate

D-ornithine

D-aspartate

D-proline

D-alanine

L-isoglutamine

L-cystathionine

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-ornithine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formyl-L-methionine

N-formimino-L-glutamate

N-(3-oxohexanoyl)-L-homoserine

N-(3-oxooctanoyl)-L-homoserine

N-(butyryl)-L-homoserine

N-(3-oxododecanoyl)-L-homoserine

N-(octanoyl)-L-homoserine

N-(3-hydroxybutanoyl)-L-homoserine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N⁶-hydroxy-L-lysine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-citrulline

L-homoserine

hypoglycin A

L-canaline

1-aminocyclopropane-1-carboxylate

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

D-alanyl-D-lactate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine