ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C162

cyclic- 3,4-O-oxalyl-L-threonate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C1010

ammonia

C12274

enol-phenylpyruvate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C158

cyclic-2,3-O-oxalyl-L-threonate

C9431

1,2-dihydro-β-NADP

C13702

1-piperideine 6-carboxylate

C14216

3-keto-L-gulonate 6-phosphate

C12054

L-dehydro-ascorbate

C163

dehydroascorbate (bicyclic form)

C11824

oxamate

C11715

quinolinate

C4690

selenodiglutathione

C4688

glutathioselenol

C13854

hydrogen selenide

C4674

glutathione disulfide

C7865

urea

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C12492

1,6-anhydro-N-acetyl-β-muramate

C1291

(4-hydroxyphenyl)acetate

C13257

carboxynorspermidine

C11849

norspermidine

C1078

(S)-2-amino-6-oxohexanoate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C1555

(S)-2,3-dihydrodipicolinate

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C11932

N-acetyl-D-galactosamine 6-phosphate

C15282

D-galactosamine-6-phosphate

C12139

preuroporphyrinogen

C14145

3-deoxy-D-glycero-2,5-hexodiulosonate

C1002

anthranilate

C11606

thiamine phosphate

C11773

phosphocholine

C12218

α-D-glucosamine 1-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C3656

D-gluconate 6-phosphate

C11869

N2-succinylglutamate

C2580

methylsalicylate

C12105

propan-2-ol

C12494

N-acetyl-D-muramate 6-phosphate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C1553

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

C11653

shikimate

C12192

carbonic acid

C11760

prephenate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C11604

thiamine diphosphate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C12390

D-erythro-imidazole-glycerol-phosphate

C12178

histidinal

C12164

H2

C1102

O-acetyl-L-serine

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C1305

4-fumaryl-acetoacetate

C12254

ethanolamine

C1528

2-dehydropantoate

C11754

propanoyl phosphate

C8191

5-dehydro-2-deoxy-D-gluconate 6-phosphate

C8210

5-dehydro-2-deoxy-D-gluconate

C13635

β-D-ribosylnicotinate

C6597

3-ureidopropanoate

C3319

4-methyl-2-oxopentanoate

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C12315

5,6-dimethylbenzimidazole

C1036

α-ribazole 5'-phosphate

C13850

hydrogenobyrinate a,c-diamide

C12407

crotonate

C6614

O-ureido-L-homoserine

C9422

nicotinate adenine dinucleotide

C11857

β-nicotinate D-ribonucleotide

C6574

(S)-ureidoglycolate

C6585

N-carbamoyl-2-oxoglycine

C12352

(S)-dihydroorotate

C571

4-hydroxy-2-nonenal

C12162

hydrogen peroxide

C1265

4-phosphooxy-L-threonine

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C13928

urea-1-carboxylate

C1325

4-amino-4-deoxychorismate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12176

histidinol

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C13627

DNA without lesion

C1186

5-oxo-L-proline

C1353

3-phosphooxypyruvate

C15181

(S)-5-amino-3-oxohexanoate

C14754

3-hydroxy-5-oxohexanoate

C14495

3-hydroxy-5- oxohexanoyl-CoA

C1688

phloretin

C15155

phloroglucinol

C11779

phloretate

C12000

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

C12004

luteolin 7-O-β-D-diglucuronide

C12002

luteolin 7-O-β-D-glucuronide

C11654

selenophosphate

C11836

hydroxypyruvate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11832

orotidine 5'-phosphate

C12848

N5-carboxyaminoimidazole ribonucleotide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C3344

2-dehydro-3-deoxy-D-gluconate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C11767

porphobilinogen

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C11483

glycolate

C15056

salicyl alcohol

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C873

coproporphyrinogen III

C1538

2-C-methyl-D-erythritol 4-phosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C1208

5-dehydro-D-gluconate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1196

S-methyl-5'-thioadenosine

C12214

(S)-4-amino-5-oxopentanoate

C1231

5-aminolevulinate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C11946

N-(5-phosphoribosyl)-anthranilate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C6349

3-oxopropanoate

C1321

4-aminobutanoate

C11639

succinate semialdehyde

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C13913

N-carbamoylputrescine

C11826

oxalosuccinate

C3482

dihydroxyacetone

C13946

5-(methylsulfanyl)-α-D-ribose

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14924

carboxyphosphate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C12048

γ-L-glutamyl 5-phosphate

C11802

4'-phosphopantetheine

C11539

xanthine

C1395

3-keto-L-gulonate

C14153

2,3-dioxo-L-gulonate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C13851

hydrogenobyrinate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C2191

carbamoyl phosphate

C891

citrate

C12364

isopentenyl diphosphate

C14074

prenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C6361

acetoacetate

C928

CO2

C10349

glycerone phosphate

C1108

acetyl phosphate

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C11635

L-tartrate

C6444

oxaloacetate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11543

H2O

C11479

phosphoenolpyruvate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C6043

4-methylphenol

C12247

L-homocysteine

C11480

phenylacetate

C803

ethylphosphate

C2255

N2

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9865

Mg-protoporphyrin

C6624

protoheme

C7662

uroporphyrinogen-I

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7632

siroheme

C7121

oxygen

C7118

hydrogen sulfide

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6617

N-acetyl-D-mannosamine 6-phosphate

C6601

(S)-ureidoglycine

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C4960

N-acetyl-β-neuraminate

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C7864

Fe3+

C4318

K+

C4320

H+

C4328

ammonium

C11023

Fe2+

C11006

Co2+

C11009

Mg2+

C11005

Zn2+

C10999

Cd2+

C11001

Mo2+

C7025

OH-

C7017

selenite

C7020

selenate

C7016

sulfite

C8958

superoxide

C7028

nitrite

C7022

selenide

C7036

hydrogencarbonate

C7030

nitrate

C7057

molybdate

C7014

sulfate

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C8959

monodehydroascorbate radical

C8965

hydroxyl radical

C9077

(2E,6E)-farnesyl diphosphate

C11222

sn-glycero-3-phosphoethanolamine

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C2930

ferrichrome

C2179

choline

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3592

N-acetylputrescine

C3583

N1-acetylspermine

C3610

N1-acetylspermidine

C3564

spermine

C3548

putrescine

C3574

spermidine

C4678

glutathione

C3998

methanethiol

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C12581

taurine

C4580

(R)-S-lactoylglutathione

C3727

all-trans-retinyl palmitate

C4901

succinyl-CoA

C4981

CoA-disulfide

C5302

4-hydroxybutanoyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C4927

(E)-glutaconyl-CoA

C4913

malonyl-CoA

C4937

3'-dephospho-CoA

C5314

2-methylacetoacetyl-CoA

C5298

acetyl-CoA

C1337

crotonyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C1175

butanoyl-CoA

C1179

pentanoyl-CoA

C1177

propanoyl-CoA

C14674

lauroyl-CoA

C5892

palmitoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C10569

tributyrin

C10554

1,2-dibutyrin

C12545

ethene

C6358

glycocholate

C6332

cholate

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C10986

L-ascorbate

C10994

thiamine

C10982

nicotinate

C10988

riboflavin

C10966

all-trans-retinol

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10049

FMNH2

C10052

FMN

C5394

(R)-NADHX

C5392

(S)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C5543

ubiquinol-8

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C1867

3-demethylubiquinol-8

C7649

isoguanine

C7647

8-oxo-dGTP

C7655

8-oxo-GTP

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C10267

pppGpp

C10266

ppGpp

C7785

hypoxanthine

C7848

2'-deoxyguanosine

C7827

GMP

C7652

cyclic-AMP

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C7783

dATP

C7823

dADP

C7751

dGTP

C7807

dGDP

C7745

GTP

C7795

GDP

C7741

IMP

C7811

XMP

C7809

AMP

C7844

ATP

C7757

ADP

C9419

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

C9420

two adjacent thymidines in DNA

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2519

thymidine

C2527

2'-deoxyuridine

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C8764

dTTP

C8772

dCTP

C8724

dUTP

C8760

UTP

C8761

CTP

C8755

dCMP

C8744

dTMP

C8770

dUMP

C2245

CMP

C2241

UMP

C8720

dTDP

C8733

dCDP

C8752

dUDP

C8732

CDP

C8714

UDP

C4243

β-nicotinamide D-ribonucleotide

C10263

ADP-α-D-glucose

C9540

preQ1

C10601

thymine

C8739

uracil

C9455

guanine

C9454

adenine

C13346

CDP-choline

C4012

5,6-dihydrouracil

C7801

5,6-dihydrothymine

C7780

UDP-α-D-glucose

C8422

CDP-α-D-glucose

C1939

dTDP-α-D-glucose

C7722

UDP-α-D-glucuronate

C7804

UDP-α-D-galactofuranose

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C8666

UDP-α-D-galactose

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8433

CDP-4-dehydro-6-deoxy-α-D-glucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10614

coenzyme A

C4985

(S)-1-pyrroline-5-carboxylate

C2305

precorrin-1

C2317

precorrin-6B

C2323

precorrin-7

C2302

precorrin-3A

C2311

precorrin-2

C2297

precorrin-8x

C2314

precorrin-3B

C2320

precorrin-4

C1705

sirohydrochlorin

C2001

hydantoin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C10609

7,8-dihydropteroate

C8741

dipicolinate

C11481

orotate

C4352

luteolin

C3093

urate

C6934

4-hydroxybenzoate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2903

hydroquinone

C11421

protocatechuate

C11409

2,3-dihydroxybenzoate

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C11429

salicylate

C8974

4-aminobenzoate

C2040

diacetyl

C2028

acetone

C6090

methylglyoxal

C3485

butan-1-al

C3500

acetaldehyde

C6246

(S)-lactaldehyde

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C2063

β-D-ribopyranose

C6134

α-L-rhamnopyranose

C6133

β-L-rhamnopyranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C3691

β-D-allofuranose

C2006

β-D-allopyranose

C3450

ethanol

C3449

butan-1-ol

C3448

methanol

C3731

glycerol

C10525

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

C2023

(S)-propane-1,2-diol

C4086

1-(β-D ribofuranosyl)nicotinamide

C4068

5-dehydro-4-deoxy-D-glucuronate

C2021

aldehydo-D-galacturonate

C6591

unsaturated gellan tetrasaccharide

C10688

maltotriose

C5698

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

C5727

raffinose

C10689

maltotetraose

C6899

stachyose

C10690

maltopentaose

C10692

maltoheptaose

C10691

maltohexaose

C10719

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

C10708

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

C10693

sucrose

C10722

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

C2012

keto-D-fructose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C13570

N-acetyl-β-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C2143

D-xylulose

C8835

β-D-fructofuranose

C7089

keto-L-rhamnulose

C3743

4-deoxy-L-threo-hex-4-enopyranuronate

C11625

1-O-acetyl-α-maltose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10381

a peptidoglycan dimer (mycobacteria)

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C6671

N,N'-diacetylchitobiose 6'-phosphate

C6669

N-monoacetylchitobiose 6'-phosphate

C8811

α-D-glucopyranose 1-phosphate

C5615

D-glyceraldehyde 3-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10340

D-erythrose 4-phosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C10326

β-D-fructose 1,6-bisphosphate

C10331

salicin 6-phosphate

C10334

arbutin-6-phosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8701

L-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C10604

D-ribulose 5-phosphate

C10607

L-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8817

L-rhamnulose 1-phosphate

C8815

α-D-galactose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C3676

L-idonate

C11485

D-gluconate

C11487

D-mannonate

C3675

D-altronate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C8321

geranyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C668

iron(III) dicitrate

C11313

6-aminopenicillanate

C1626

isopenicillin N

C1599

penicillin G

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4817

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

C7685

allantoate

C9539

(S)-(+)-allantoin

C8033

5-amino-4-imidazolecarboxyamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8950

chorismate

C5596

L-aspartate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8555

cis-homoaconitate

C8536

3-carboxy-cis,cis-muconate

C8538

(2R)-homocitrate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3308

pyruvate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C11517

acetate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C6186

(S)-lactate

C3418

butanoate

C3419

pentanoate

C3415

laurate

C951

4-hydroxybutanoate

C6423

(R)-2-hydroxybutanoate

C3383

palmitate

C13210

oleate

C11482

(R)-pantoate

C11503

5-deoxy-D-glucuronate

C2137

D-tagaturonate

C2045

β-D-glucuronate

C3536

L-α-amino-ε-keto-pimelate

C3530

L-2-aminoadipate

C5032

carbamate

C5579

L-serine

C5573

L-tyrosine

C5643

L-asparagine

C5577

L-threonine

C5609

L-glutamine

C12067

glycine

C5612

L-cysteine

C5605

L-histidine

C5584

L-lysine

C5642

L-arginine

C5607

L-glutamate

C5571

L-valine

C5603

L-isoleucine

C5588

L-leucine

C5581

L-proline

C5597

L-alanine

C2469

L-phenylalanine

C5575

L-tryptophan

C5583

L-methionine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C8797

D-glutamate

C8805

D-aspartate

C8799

D-alanine

C12231

L-ornithine

C5580

L,L-diaminopimelate

C12073

L-aspartyl-4-phosphate

C5595

L-cystathionine

C13322

N-carbamoyl-L-aspartate

C5462

N-formyl-L-methionine

C15000

N-acetyl-L-ornithine

C12065

L-saccharopine

C3402

3-phospho-L-serine

C13320

N-carbamoylglycine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C12245

L-homoserine

C12229

O-phospho-L-homoserine

C12237

L-canaline

C12233

L-glutamate-5-semialdehyde

C12227

O-succinyl-L-homoserine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12239

L-aspartate 4-semialdehyde

C5585

meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine