an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

hop-22(29)-ene

squalene

N-ethylsuccinimide

N-ethylmaleimide

histidinol

histidinal

presqualene diphosphate

ADP-D-glycero-β-D-manno-heptose

hydrogen selenide

(R)-4-phosphopantoate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

S-ribosyl-L-homocysteine

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

2-iminoacetate

2-methyl-4-chlorophenol

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

3-propylcatechol

5-(methylsulfanyl)-ribulose 1-phosphate

4-amino-4-deoxychorismate

5-phospho-α-D-ribose 1,2-cyclic phosphate

(S)-2-amino-6-oxohexanoate

α-D-ribose 1,5-bisphosphate

α-D-ribose-1-methylphosphonate 5-phosphate

propanoyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

β-D-fructose 2,6-bisphosphate

γ-butyrobetaine

4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate

muconolactone

3-methylmuconolactone

(+)-muconolactone

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

creatinine

S-formylglutathione

4-aminobutanoate

4-methylsalicylate

5-methylsalicylate

4-hydroxylaminobenzoate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

dialurate

mercuriphenyl acetate

1,4-dihydroxy-2-naphthoate

autoinducer 2

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-amino-3-carboxymuconate-6-semialdehyde

glutathione disulfide

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

2-pyrone-4,6-dicarboxylate

2,6-dioxo-6-phenylhexa-3-enoate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(3-hydroxyphenyl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

isopropylamine

glutathioselenol

selenodiglutathione

4-oxoglutaramate

5-aminopentanoate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

pyruvic oxime

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

1-piperideine-2-carboxylate

4-oxalocrotonate

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

5-methylcytosine

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

succinate semialdehyde

formamide

oxalate

CO₂

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

oxaloacetate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

glycerone phosphate

phosphoenolpyruvate

4-methyl-2-oxopentanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2-dehydropantoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

L-histidinol phosphate

imidazole acetol-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-pantothenate

acetoacetate

N-acetylglutamyl-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

nicotinate adenine dinucleotide

L-canavanine

canavaninosuccinate

L-arginino-succinate

preuroporphyrinogen

prephenate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

3-dehydroshikimate

shikimate

coproporphyrinogen III

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

(S)-dihydroorotate

carbamoyl phosphate

lipid IV_A

lipid A disaccharide (E. coli)

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

orotidine 5'-phosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

γ-L-glutamyl 5-phosphate

selenophosphate

urocanate

4-imidazolone-5-propanoate

3-oxopropanoate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

citrate

ethanolamine

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

5-enolpyruvoyl-shikimate 3-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

N-succinyl-2-amino-6-ketopimelate

2-C-methyl-D-erythritol 4-phosphate

lipid X

3-dehydroquinate

aminoacetone

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

oxalosuccinate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-hydroxybenzaldehyde

2-(4-hydroxyphenyl)-2-oxoacetate

phenylglyoxylate

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

acetyl phosphate

urea

3-demethylubiquinol-6

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

5-guanidino-2-oxopentanoate

β-nicotinate D-ribonucleotide

4-maleyl-acetoacetate

homogentisate

quinolinate

hydrogen peroxide

N-acetyl-L-glutamate 5-semialdehyde

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(R)-1-amino-2-propanol O-2-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

D-erythro-imidazole-glycerol-phosphate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

shikimate 3-phosphate

porphobilinogen

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

L-tartrate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

hydroxypyruvate

glycolate

L-selenocystathionine

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

carboxyphosphate

α-D-glucosamine 1-phosphate

ethylamine

N-isopropylammelide

hydroxyatrazine

(S)-ureidoglycolate

tartronate semialdehyde

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

anthranilate

N-(5-phosphoribosyl)-anthranilate

2-hydroxy-3-oxosuccinate

meso-tartrate

5-oxo-L-proline

(R)-mandelate

(S)-mandelate

O-acetyl-L-serine

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

cis,cis-muconate

urea-1-carboxylate

5-dehydro-D-gluconate

L-gulono-1,4-lactone

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(2R,3S)-3-methylmalate

citraconate

(S)-5-amino-3-oxohexanoate

N²-succinylglutamate

(R)-mevalonate

4-hydroxy-2-nonenal

gallate

digallate

α-D-glucopyranosyl-diphosphoundecaprenol

2-maleylacetate

6-chlorohydroxyquinol

2-oxoadipate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-aminoacetaldehyde

carbonic acid

ADP-L-glycero-β-D-manno-heptose

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

hydroxylamine

2-dehydro-3-deoxy-D-galactonate

N-acetyl-D-muramate 6-phosphate

β-D-ribosylnicotinate

DNA without lesion

3-deoxy-α-D-manno-2-octulosonate

5-carboxymethyl-2-hydroxymuconate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

4-fumaryl-acetoacetate

8-amino-7-oxononanoate

pimeloyl-CoA

dethiobiotin

7,8-diaminopelargonate

2-phosphoglycolate

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

7-carboxy-7-deazaguanine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

2-dehydro-3-deoxy-D-gluconate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

4-chlorobenzoate

N-formylmaleamate

2,5-dihydroxypyridine

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

dihydroxyacetone

4,5-dihydroxyphthalate

phthalate 4,5-cis-dihydrodiol

phthalate

butyramide

D-galacto-hexodialdose

3-phosphonopyruvate

xanthine

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

6-phospho D-glucono-1,5-lactone

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

(2-hydroxyphenyl)acetate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

trans-O-hydroxybenzylidenepyruvate

O-ureido-L-homoserine

N-Formyl-L-kynurenine

3-hydroxyanthranilate

3-hydroxypropanoate

thiamine diphosphate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

methylsalicylate

salicyl alcohol

6-amino-2-oxohexanoate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

3-mercaptopyruvate

2-hydroxy-6-oxo-nona-2,4-dienoate

(E)-3-(methoxycarbonyl)pent-2-enedioate

N²-succinyl-L-glutamate 5-semialdehyde

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

N-succinyl-L,L-2,6-diaminopimelate

4-pyridoxolactone

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

L-α-amino-ε-keto-pimelate

carbamate

L-2-aminoadipate

L-kynurenine

L-citrulline

L-cysteine

L-methionine

L-aspartate

glycine

L-serine

L-glutamate

L-leucine

L-isoleucine

L-valine

L-proline

L-tyrosine

L-threonine

L-asparagine

L-arginine

L-glutamine

L-alanine

L-phenylalanine

L-histidine

L-tryptophan

L-lysine

S-sulfo-L-cysteine

L-ornithine

1-aminocyclopropane-1-carboxylate

L-homocysteine

S-adenosyl-L-methionine

L-homoserine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-cystine

hypoglycin A

3-sulfino-L-alanine

L-canaline

L-glutamate-5-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenocysteine

meso-diaminopimelate

L-saccharopine

L-selenomethionine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

iminoarginine

D-proline betaine

L-proline betaine

O-acetyl-L-homoserine

N-methyl-L-proline

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N⁵-hydroxy-L-ornithine

cis-4-hydroxy-D-proline

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-aspartate

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

S-methyl-L-methionine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-isoglutamine

L-cystathionine

L,L-diaminopimelate

D-alanine

D-arginine

D-glutamate

D-lysine

creatine

N-carbamoylsarcosine

β-alanine

(S)-3-amino-2-methylpropanoate

2,3-dihydroxybenzoate

protocatechuate

5-chloroprotocatechuate

trans-cinnamate

salicylate

4-aminobenzoate

benzoate

acetate

L-carnitine

gentisate

5-deoxy-D-glucuronate

(R)-pantoate

orotate

allantoate

5-chloro-5-deoxy-D-ribonate

D-gluconate

D-mannonate

(S)-1-pyrroline-5-carboxylate

pristanate

butanoate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(S)-lactate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

pyruvate

formate

propanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

glyoxylate

2-oxobutanoate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

cis-aconitate

trans-aconitate

D-threo-isocitrate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

(3E)-2-oxohex-3-enedioate

D-galactarate

D-glucarate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

nicotinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

penicillin N

isopenicillin N

(S)-(+)-allantoin

acetamide

salicylaldehyde

α-Kdo-(2→6)-lipid IV_A

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

all-trans-retinyl palmitate

all-trans-retinol

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

L-idonate

L-gulonate

D-galactonate

1-(β-D ribofuranosyl)nicotinamide

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-glucuronate

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

α,α-trehalose

maltopentaose

maltohexaose

maltotriose

maltoheptaose

maltotetraose

β-L-rhamnopyranose

α-L-rhamnopyranose

β-D-fructofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

β-D-ribopyranose

α-D-xylopyranose

D-glyceraldehyde

α-L-arabinopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

glycolaldehyde

keto-D-fructose

keto-L-sorbose

D-ribulose

D-xylulose

L-ribulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

L-iditol

D-sorbitol

D-arabinitol

D-ribitol

hydroxyquinol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

4-methylcatechol

5-chloro-3-methylcatechol

3,5-dichlorocatechol

3-methylcatechol

3-sulfocatechol

4-chlorocatechol

biphenyl-2,3-diol

catechol

myo-inositol

scyllo-inositol

1D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

scyllo-inosose

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1-octanol

ethanol

methanol

3-(N-morpholino)propanal

methylglyoxal

benzaldehyde

1-octanal

acetaldehyde

butan-1-al

formaldehyde

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

menadione

caldariellaquinone

diacetyl

acetone

benzene

4-nitrobenzoate

urate

2-propylphenol

cyanuric acid

toluene

4-hydroxybenzoate

biphenyl

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

ferulate

quercetin

2,6-dichlorohydroquinone

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-10

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

demethylmenaquinol-11

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-8

demethylmenaquinol-9

menaquinol-11

menaquinol-13

menaquinol-12

menaquinol-7

menaquinol-6

menaquinol-10

menaquinol-8

menaquinol-9

ubiquinol-6

ubiquinol-10

ubiquinol-8

ubiquinol-9

ubiquinol-7

2,4-dichlorophenol

5-chlorosalicylate

4-chlorosalicylate

2,4,6-trichlorophenol

phenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

atrazine

2-hydroxychromene-2-carboxylate

adenine

guanine

IMP

AMP

GMP

XMP

GTP

ATP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dAMP

dGMP

hypoxanthine

inosine

adenosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

7,8-dihydrolumazine

tetrahydromethanopterin

6-carboxy-5,6,7,8-tetrahydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropteroate

7,8-dihydromethanopterin

5,10-methylene-tetrahydromethanopterin

5-formyl-tetrahydromethanopterin

5,10-methenyltetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FMNH₂

reduced riboflavin

FADH₂

FAD

FMN

riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

cytosine

thymine

preQ₁

isoguanine

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

CDP

dCDP

UDP

dUDP

5,6-dihydrothymine

5,6-dihydrouracil

UTP

dCMP

dTMP

dUMP

dUTP

dCTP

CTP

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTDP

dTTP

UMP

CMP

cytidine

uridine

5-fluorouracil

cob(I)alamin

adenosylcobalamin

cobyrinate

precorrin-3B

precorrin-6A

precorrin-2

precorrin-1

precorrin-8x

precorrin-3A

precorrin-5

precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-6B

cobalt-precorrin-5B

precorrin-7

precorrin-6B

coenzyme A

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

cyclic-AMP

8-oxo-GMP

8-oxo-GTP

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

cyclic-GMP

ppGpp

8-oxo-dGMP

8-oxo-dGTP

pppGpp

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxine

4-pyridoxate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal

ethene

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

methane

gentisyl-CoA

salicyl-CoA

anthraniloyl-CoA

3-hydroxypropanoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

crotonobetainyl-CoA

isobutanoyl-CoA

acryloyl-CoA

2-methylbutanoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

oxalyl-CoA

formyl-CoA

succinyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(S)-3-aminobutanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-chlorobenzoyl-coA

phenylacetyl-CoA

4-hydroxybenzoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

trans-feruloyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

D-glucono-1,5-lactone

D-galactono-1,4-lactone

trans-dienelactone

cis-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

sulfoacetaldehyde

taurine

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

thiocyanate

S-sulfanylglutathione

choline

betaine aldehyde

betaine aldehyde hydrate

choline sulfate

agmatine

cadaverine

putrescine

spermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

hydroxyl radical

nitric oxide

superoxide

OH^-

selenite

sulfate

hydrogensulfite

molybdate

hydrogencarbonate

selenide

nitrate

sulfite

selenate

thiosulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Hg²⁺

Cu²⁺

Mo²⁺

Fe²⁺

Co²⁺

Mg²⁺

ammonium

H⁺

K⁺

3-chloro-cis,cis-muconate

2-chloroacetate

2-chloromaleylacetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

acrylonitrile

propionitrile

3-cyanopyridine

(indole-3-yl)acetonitrile

hydrogen cyanide

n-butyronitrile

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

Hg⁰

oxygen

hydrogen sulfide

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

Mg-protoporphyrin

protoheme

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

cob(II)yrinate a,c-diamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal