an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

H₂O

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

hydrogen peroxide

citrate

5-dehydro-D-gluconate

CO₂

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

γ-L-glutamyl 5-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

phosphoenolpyruvate

L-histidinol phosphate

imidazole acetol-phosphate

glycerone phosphate

acetoacetate

D-gluconate 6-phosphate

butanoyl phosphate

coproporphyrinogen III

S-ribosyl-L-homocysteine

quinolinate

β-nicotinate D-ribonucleotide

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

oxaloacetate

oxalosuccinate

acetyl phosphate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

formate

4'-phosphopantetheine

(S)-dihydroorotate

orotidine 5'-phosphate

2-dehydropantoate

succinate semialdehyde

betaine aldehyde

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

carbamoyl phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

anthranilate

α-D-glucosamine 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

5-(methylsulfanyl)-ribulose 1-phosphate

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

histidinol

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

1,4-dihydroxy-2-naphthoyl-CoA

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

urocanate

4-imidazolone-5-propanoate

2-C-methyl-D-erythritol 4-phosphate

(S)-2,3-dihydrodipicolinate

3'-phosphoadenylyl-sulfate

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

3-oxopropanoate

prenyl diphosphate

methylsalicylate

salicyl alcohol

ethanolamine

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

glycolate

selenophosphate

xanthine

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

N-(5-phosphoribosyl)-anthranilate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

L-β-lysine

3-mercaptopyruvate

phloretin

pinocembrin chalcone

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

(R)-pantothenate

prephenate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

isopentenyl diphosphate

3-dehydroshikimate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

porphobilinogen

preuroporphyrinogen

DNA without lesion

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

2-oxopent-4-enoate

2,6-dioxo-6-phenylhexa-3-enoate

2-maleylacetate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(R)-mandelate

(S)-mandelate

L-canavanine

(indol-3-yl)pyruvate

7-carboxy-7-deazaguanine

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

carboxyphosphate

(R)-4'-phosphopantothenoyl-L-cysteine

thiamine diphosphate

propanoyl phosphate

3-phosphooxypyruvate

β-D-ribosylnicotinate

hop-22(29)-ene

squalene

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

shikimate

5-methylcytosine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

hexulose 6-phosphate

2-dehydro-3-deoxy-D-gluconate

4,5-dihydroxyphthalate

15-cis-4,4'-diapophytoene

glucosyl-4,4'-diaponeurosporenoate

12-methyltetradecanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(S)-4-hydroxy-2-oxopentanoate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

(4-hydroxyphenyl)acetate

(R)-4'-phosphopantothenate

2-phosphoglycolate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

carbonic acid

4-aminobutanoate

N-Formyl-L-kynurenine

(2R,3S)-3-methylmalate

citraconate

4-maleyl-acetoacetate

homogentisate

4-fumaryl-acetoacetate

(2-hydroxyphenyl)acetate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

4-amino-4-deoxychorismate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

L-selenocystathionine

(lipoyl)adenylate

histidinal

D-erythro-imidazole-glycerol-phosphate

urea

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

glutathionylspermidine

autoinducer 2

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoate

formamide

CDP-glycerol

β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine

O-acetyl-L-serine

nicotinate adenine dinucleotide

hydrogen selenide

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(S)-ureidoglycolate

(2Z,4E)-2-aminomuconate

2-oxoglutaramate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

presqualene diphosphate

glutathione disulfide

N-succinyl-L,L-2,6-diaminopimelate

glutathioselenol

selenodiglutathione

4-oxoglutaramate

aminoacetone

picolinate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-citrulline

L-cysteine

L-methionine

L-proline

L-aspartate

L-tryptophan

L-glutamate

L-serine

L-asparagine

glycine

L-alanine

L-valine

L-phenylalanine

L-glutamine

L-isoleucine

L-histidine

L-threonine

L-leucine

L-arginine

L-tyrosine

L-lysine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-homocysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-ornithine

O-phospho-L-homoserine

L-homoserine

L-canaline

meso-diaminopimelate

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

S-methyl-L-methionine

S-methyl-L-cysteine

3-phospho-L-serine

L-cystathionine

L,L-diaminopimelate

S-trans-1-propenyl-L-cysteine

S-allyl-L-cysteine

L-2,4-diaminobutanoate

L-isoglutamine

D-glutamate

D-alanine

D-aspartate

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

salicylate

protocatechuate

2,3-dihydroxybenzoate

benzoate

4-aminobenzoate

D-gluconate

acetate

orotate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

allantoate

(S)-1-pyrroline-5-carboxylate

pristanate

butanoate

7-hydroxylaurate

laurate

octanoate

decanoate

stearate

palmitate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

phytenate

oleate

(15Z)-tetracosenoate

linoleate

α-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

leukotriene-E4

leukotriene-D4

(R)-lactate

(S)-lactate

(R)-3-hydroxybutanoate

propanoate

pyruvate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

4,4'-diapolycopenedioate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

staphyloxanthin

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

tetraprenyl-β-curcumene

all-trans-retinyl palmitate

all-trans-retinol

all-trans-4,4'-diaponeurosporene

all-trans-4,4'-diapo-ζ-carotene

all-trans-4,4'-diapophytofluene

4,4'-diaponeurosporenal

4,4'-diaponeurosporenoate

4,4'-diapolycopenedioate glycosyl diester

all-trans-4,4'-diapolycopene

4,4'-diapolycopen-4,4'-dial

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

betanidin quinone

betanidin

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

D-galactosylononitol

galactinol

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

D-glyceraldehyde

α-D-ribofuranose

glycolaldehyde

L-glyceraldehyde

keto-D-fructose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-mannitol 1-phosphate

maltotriose

maltopentaose

maltohexaose

maltoheptaose

maltotetraose

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3,4-dihydroxyphenylacetate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

D-ononitol

ethanol

butan-1-ol

propan-1-ol

phytol

methanol

methylglyoxal

phytenal

acetaldehyde

formaldehyde

butan-1-al

1-propanal

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

2,5-piperidinedione

caldariellaquinone

diacetyl

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

4-hydroxybenzoate

2-nitrobenzoate

2-hydroxylaminobenzoate

6,7-dehydrobaicalein

baicalein

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

ubiquinol-8

3-amino-4-hydroxybenzaldehyde

3-amino-4-hydroxybenzoate

3-acetylamino-4-hydroxybenzaldehyde

3-acetylamino-4-hydroxybenzoate

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6-isobutyl-4-hydroxy-2-pyrone

adenine

guanine

AMP

GMP

IMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dIDP

dADP

dGTP

dITP

dATP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

tetrahydromethanopterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

molybdopterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

MoO₂-molybdopterin cofactor

FADH₂

reduced riboflavin

FMNH₂

FAD

riboflavin

FMN

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

cytosine

preQ₁

isoguanine

UDP

5,6-dihydrothymine

5,6-dihydrouracil

dUTP

dUDP

CTP

CDP

dCTP

dCDP

UTP

dTTP

dTDP

dipicolinate

dTMP

dUMP

dCMP

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

UMP

CMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

5-fluorouracil

adenosylcobalamin

sirohydrochlorin

precorrin-2

precorrin-1

coenzyme A

(R)-lipoate

5'-deoxyadenosine

adenylo-succinate

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

pppGpp

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

8-oxo-dGMP

8-oxo-dGTP

8-oxo-GMP

8-oxo-GTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

cob(I)alamin

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholate

glycocholate

acetyl-CoA

2-methylacetoacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

malonyl-CoA

3'-dephospho-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

dihydro-4-coumaroyl-CoA

isobutanoyl-CoA

5-aminolevulinyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

pristanoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

methanethiol

thiocyanate

S-sulfanylglutathione

agmatine

spermidine

putrescine

spermine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

sulfate

selenate

hydrogencarbonate

nitrite

selenide

sulfite

thiosulfate

molybdate

OH^-

selenite

hydrogensulfite

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Fe²⁺

Mg²⁺

ammonium

H⁺

2-chloroacetate

hydrogen cyanide

preQ₀

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

Mg-protoporphyrin

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

DNA with lesion