an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

glycerone phosphate

5-enolpyruvoyl-shikimate 3-phosphate

acetoacetate

H₂O

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

CO₂

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

carboxyphosphate

carbamoyl phosphate

α-D-glucosamine 1-phosphate

4-maleyl-acetoacetate

homogentisate

oxalosuccinate

quinolinate

β-nicotinate D-ribonucleotide

hydrogen peroxide

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(R)-1-amino-2-propanol O-2-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

preuroporphyrinogen

prephenate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

1-deoxy-L-glycero-tetrulose 4-phosphate

formate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

3-dehydroshikimate

shikimate

oxaloacetate

acetyl phosphate

citrate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

(S)-ureidoglycolate

urea

orotidine 5'-phosphate

γ-L-glutamyl 5-phosphate

4-imidazolone-5-propanoate

urocanate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

5-dehydro-D-gluconate

betaine aldehyde

choline

aminoacetone

(S)-dihydroorotate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

L-selenocystathionine

hydroxypyruvate

glycolate

porphobilinogen

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

L-histidinol phosphate

imidazole acetol-phosphate

nicotinate adenine dinucleotide

oxalate

ethylamine

N-isopropylammelide

hydroxyatrazine

tartronate semialdehyde

phosphoenolpyruvate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

O-ureido-L-homoserine

formamide

succinate semialdehyde

2-dehydropantoate

anthranilate

N-(5-phosphoribosyl)-anthranilate

4-aminobutanoate

3-oxopropanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-C-methyl-D-erythritol 4-phosphate

5-methylcytosine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

coproporphyrinogen III

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

4-hydroxy-2-nonenal

6-chlorohydroxyquinol

2-maleylacetate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

N²-succinylglutamate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinyl-L-glutamate 5-semialdehyde

DNA without lesion

β-D-fructose 2,6-bisphosphate

2-aminoacetaldehyde

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

urea-1-carboxylate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-hydroxyphenyl)acetate

(2R,3S)-2,3-dimethylmalate

carbonic acid

propanoyl phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

S-ribosyl-L-homocysteine

pseudouridine 5'-phosphate

L-gulono-1,4-lactone

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

4-fumaryl-acetoacetate

(R)-4'-phosphopantothenate

(R)-4-phosphopantoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

α-ribazole

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

(R)-pantothenate

3-phosphonopyruvate

xanthine

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

6-phospho D-glucono-1,5-lactone

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

creatinine

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate

cis,cis-muconate

(+)-muconolactone

muconolactone

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2R,3S)-3-methylmalate

citraconate

2-dehydro-3-deoxy-D-galactonate

5-oxo-L-proline

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

(S)-2,3,4,5-tetrahydrodipicolinate

thiamine diphosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

3-dehydroquinate

2-oxoadipate

3-phosphooxypyruvate

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

(4S)-4-hydroxy-2-oxoheptanedioate

(R)-mandelate

(S)-mandelate

hop-22(29)-ene

squalene

4-pyridoxolactone

choline sulfate

ADP-L-glycero-β-D-manno-heptose

(S)-5-amino-3-oxohexanoate

ethanolamine

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

2-dehydro-3-deoxy-D-gluconate

(S)-2-amino-6-oxohexanoate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

shikimate 3-phosphate

2-iminoacetate

histidinol

histidinal

D-erythro-imidazole-glycerol-phosphate

ADP-D-glycero-β-D-manno-heptose

2-phosphoglycolate

lipid IV_A

3-mercaptopyruvate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

6-amino-2-oxohexanoate

2-pyrone-4,6-dicarboxylate

selenophosphate

3-hydroxypropanoate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

4-amino-4-deoxychorismate

7-carboxy-7-deazaguanine

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

β-D-ribosylnicotinate

4-methyl-3-oxoadipate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

O-acetyl-L-serine

6-hydroxy-N-methylmyosmine

(R)-6-hydroxynicotine

2'-hydroxypseudobaptigenin

(3R)-sophorol

2-hydroxyformononetin

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

presqualene diphosphate

S-formylglutathione

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

methylsalicylate

salicyl alcohol

lipid A disaccharide (E. coli)

lipid X

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-deoxy-D-manno-octulosonate 8-phosphate

D-galacto-hexodialdose

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

isoquinolin-2(1H)-one

isoquinoline

4-hydroxybenzaldehyde

5-carboxymethyl-2-hydroxymuconate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-6-(5-phospho-D-ribitylamino)uracil

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

autoinducer 2

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

dialurate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

hydrogen selenide

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

mercuriphenyl acetate

(salicyl)adenylate

3-maleylpyruvate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

N-acetyl-D-muramate 6-phosphate

glutathione disulfide

glutathioselenol

selenodiglutathione

pseudouridine

isopropylamine

2-keto-L-gulonate

4-oxoglutaramate

5-aminopentanoate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

betaine aldehyde hydrate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

1-piperideine-2-carboxylate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-citrulline

L-glutamate

L-glutamine

L-aspartate

L-arginine

L-threonine

glycine

L-serine

L-phenylalanine

L-leucine

L-proline

L-alanine

L-histidine

L-tyrosine

L-tryptophan

L-isoleucine

L-valine

L-lysine

L-asparagine

L-cysteine

L-methionine

L-homocysteine

S-adenosyl-L-homocysteine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-ornithine

O-phospho-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

L-canaline

O-succinyl-L-homoserine

hypoglycin A

3-sulfino-L-alanine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-saccharopine

O-acetyl-L-homoserine

N-methyl-L-proline

D-proline betaine

L-proline betaine

trans-4-hydroxy-L-proline

cis-4-hydroxy-D-proline

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

L-threonine 3-O-phosphate

3-phospho-L-serine

L-cystathionine

L,L-diaminopimelate

L-isoglutamine

D-glutamate

D-alanine

D-lysine

D-aspartate

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

protocatechuate

salicylate

2,3-dihydroxybenzoate

4-aminobenzoate

acetate

allantoate

D-gluconate

orotate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

D-mannonate

gentisate

5-deoxy-D-glucuronate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-erythro-hex-4-enopyranuronate

pristanate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

(S)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

propanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxobutanoate

pyruvate

2-oxoglutarate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

D-galactarate

D-glucarate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

6-aminopenicillanate

penicillin G

isopenicillin N

acetamide

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

all-trans-retinyl palmitate

all-trans-retinol

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

L-gulonate

D-galactonate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-L-rhamnopyranose

α-L-rhamnopyranose

β-D-fructofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribopyranose

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

glycolaldehyde

keto-D-fructose

keto-L-sorbose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

L-iditol

D-sorbitol

D-mannitol

D-arabinitol

α,α-trehalose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

maltotriose

hydroxyquinol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

catechol

myo-inositol

scyllo-inositol

1D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

ethanol

methanol

3-(N-morpholino)propanal

methylglyoxal

butan-1-al

acetaldehyde

formaldehyde

1-propanal

menadione

caldariellaquinone

diacetyl

acetone

6-hydroxypseudooxynicotine

4-hydroxybenzoate

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

cyanuric acid

toluene

quercetin

menadiol

2,6-dichlorohydroquinone

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

ubiquinol-8

2,4,6-trichlorophenol

phenol

4-hydroxybenzyl alcohol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

atrazine

(3R)-vestitone

adenine

guanine

AMP

IMP

GMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dITP

dATP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

7,8-dihydrolumazine

tetrahydromethanopterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

5-formyl-tetrahydromethanopterin

7,8-dihydromethanopterin

5,10-methenyltetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

cytosine

preQ₁

isoguanine

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

CTP

dTMP

dUMP

dUTP

CDP

dCDP

UDP

dUDP

5,6-dihydrothymine

5,6-dihydrouracil

dCTP

UTP

dTTP

dTDP

dCMP

UMP

CMP

cytidine

uridine

2'-deoxyuridine

2'-deoxycytidine

5-fluorouracil

adenosylcobalamin

cobyrinate

precorrin-2

precorrin-1

precorrin-3A

precorrin-6A

precorrin-6B

precorrin-8x

precorrin-7

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

precorrin-5

precorrin-4

precorrin-3B

coenzyme A

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

ppGpp

8-oxo-dGMP

8-oxo-dGTP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

pppGpp

cyclic-GMP

8-oxo-GMP

8-oxo-GTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxine

4-pyridoxate

cob(I)alamin

androsterone

ethene

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

testosterone

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholest-dien-3-one

cholest-4-en-3-one

3,22-dioxochol-4-en-24-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

5α-androstane-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

methane

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

acetyl-CoA

malonyl-CoA

formyl-CoA

oxalyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(S)-3-aminobutanoyl-CoA

gentisyl-CoA

salicyl-CoA

anthraniloyl-CoA

3-hydroxypropanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(3S)-citryl-CoA

phenylacetyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(2R,3S)-β-methylmalyl-CoA

acryloyl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

16-hydroxypalmitoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

sulfoacetaldehyde

sulfoacetate

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

thiocyanate

agmatine

cadaverine

putrescine

spermidine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

hydrogencarbonate

sulfite

selenate

selenide

OH^-

selenite

hydrogensulfite

sulfate

molybdate

nitrate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Fe²⁺

Hg²⁺

Mg²⁺

Co²⁺

Mo²⁺

H⁺

K⁺

ammonium

2-chloromaleylacetate

2-chloroacetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

(indole-3-yl)acetonitrile

acrylonitrile

hydrogen cyanide

preQ₀

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

Hg⁰

uroporphyrinogen-III

protoporphyrinogen IX

Mg-protoporphyrin

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

protoheme

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(I)yrinate a,c-diamide

cob(I)inamide

carboxyphosphinopyruvate

phosphonoacetaldehyde

1-carboxyvinyl carboxyphosphonate

(2-aminoethyl)phosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal