an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

D-erythro-imidazole-glycerol-phosphate

N-Formyl-L-kynurenine

DNA without lesion

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

formamide

urocanate

4-imidazolone-5-propanoate

carbonic acid

4-fumaryl-acetoacetate

acetoacetate

(S)-dihydroorotate

carbamoyl phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

N-carbamoylputrescine

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

3-oxopropanoate

5-amino-6-(D-ribitylamino)uracil

citrate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

oxalate

(S)-3-methyl-2-oxopentanoate

(2R,3S)-3-isopropylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

O-acetyl-L-serine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2-phosphoglycolate

glycolate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

1-deoxy-L-glycero-tetrulose 4-phosphate

3-dehydroquinate

3-dehydroshikimate

prephenate

isopentenyl diphosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-methyl-2-oxobutanoate

salicyl alcohol

methylsalicylate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

anthranilate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

3-methylbenzyl alcohol

3-methylbenzaldehyde

4-methylbenzyl alcohol

2-dehydropantoate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

succinate semialdehyde

glycerone phosphate

phosphoenolpyruvate

cyanate

4-hydroxy-2-nonenal

imidazole acetol-phosphate

L-histidinol phosphate

oxaloacetate

5-aminolevulinate

porphobilinogen

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

CO₂

α-D-glucosamine 1-phosphate

H₂O

bisorganyltrisulfane

(3E)-2-oxopent-3-enoate

4-oxalocrotonate

1-piperideine-2-carboxylate

(2E)-2-hydroxypenta-2,4-dienoate

ammonia

enol-phenylpyruvate

1,2-dihydro-β-NADP

picolinate

1-piperideine 6-carboxylate

5-aminopentanoate

4-oxoglutaramate

(2Z,4E)-2-aminomuconate

3-hydroxyanthranilate

N-acetyl-D-muramate 6-phosphate

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

4-maleyl-acetoacetate

trans-O-hydroxybenzylidenepyruvate

naphthalene-1,2-diol

dialurate

selenodiglutathione

glutathioselenol

hydrogen selenide

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

oxalosuccinate

mercuriphenyl acetate

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

butanoyl phosphate

acetyl phosphate

4-aminobutanoate

(S)-ureidoglycolate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

phosphonoacetate

2-pyrone-4,6-dicarboxylate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

2-oxoadipate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

(S)-5-amino-3-oxohexanoate

urea-1-carboxylate

6-amino-2-oxohexanoate

4'-phosphopantetheine

carboxyphosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-amino-6-oxohexanoate

carboxynorspermidine

norspermidine

glutathione disulfide

urea

shikimate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

histidinal

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

propanoyl phosphate

(R)-4'-phosphopantothenate

N-(5-phosphoribosyl)-anthranilate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

5-dehydro-4-deoxy-D-glucarate

tartronate semialdehyde

2-C-methyl-D-erythritol 4-phosphate

shikimate 3-phosphate

5-methylcytosine

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(indol-3-yl)pyruvate

(2S)-2-isopropylmalate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

2-aminoacetaldehyde

L-selenocystathionine

3'-phosphoadenylyl-sulfate

S-formylglutathione

isoquinoline

isoquinolin-2(1H)-one

L-gulono-1,4-lactone

2-dehydro-3-deoxy-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

7,8-diaminopelargonate

dethiobiotin

1,6-anhydro-N-acetyl-β-muramate

orotidine 5'-phosphate

L-canavanine

(2S)-4-acetamido-2-aminobutanoate

ectoine

H₂

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

β-D-ribosylnicotinate

thiamine phosphate

4-amino-4-deoxychorismate

ethanolamine

pimeloyl-CoA

8-amino-7-oxononanoate

7-carboxy-7-deazaguanine

N-acetyl-L-glutamate 5-semialdehyde

3-hydroxypropanoate

histidinol

(R)-pantothenate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

S-adenosyl 3-(methylsulfanyl)propylamine

5-oxo-L-proline

N⁵-carboxyaminoimidazole ribonucleotide

nicotinate adenine dinucleotide

coproporphyrinogen III

β-nicotinate D-ribonucleotide

quinolinate

5-phospho-β-D-ribosylamine

2-iminoacetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

5-carboxymethyl-2-hydroxymuconate

2-amino-3-carboxymuconate-6-semialdehyde

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

3-maleylpyruvate

4-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-mercaptopyruvate

cyclopentanol

cyclopentanone

cyclohexanone

ε-caprolactone

hydrogen peroxide

N-acetylglutamyl-phosphate

preuroporphyrinogen

N-succinyl-L,L-2,6-diaminopimelate

5-enolpyruvoyl-shikimate 3-phosphate

2-maleylacetate

xanthine

homogentisate

(2-hydroxyphenyl)acetate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

γ-L-glutamyl 5-phosphate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

phenylacetate

ethylphosphate

phosphonoacetaldehyde

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-6B

cobalt-precorrin-6A

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosylcobyrate

adenosyl-cobinamide phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

Mg-protoporphyrin

protoheme

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

siroheme

hydrogen sulfide

oxygen

Hg⁰

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

2-chloroacetate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ω-saturated C55 dolichol phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(indole-3-yl)acetonitrile

preQ₀

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

2-nitrobenzoate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

Fe³⁺

H⁺

ammonium

Co²⁺

Fe²⁺

Hg²⁺

Mg²⁺

sulfite

hydrogencarbonate

sulfate

hydrogensulfite

selenite

OH^-

selenate

superoxide

phosphate

diphosphate

triphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

glycine betaine

betaine aldehyde

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

putrescine

cadaverine

spermidine

3-acetylamino-4-hydroxybenzoate

3-acetylamino-4-hydroxybenzaldehyde

3-amino-4-hydroxybenzoate

3-amino-4-hydroxybenzaldehyde

S-(hydroxymethyl)glutathione

glutathione

methanethiol

thiocyanate

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

taurine

3-sulfocatechol

(R)-S-lactoylglutathione

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

succinyl-CoA

formyl-CoA

oxalyl-CoA

malonyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

4-hydroxybenzoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

phenylacetyl-CoA

(S)-3-aminobutanoyl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

isobutanoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

3'-dephospho-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybutanoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

propanoyl-CoA

butanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

nicotinate

riboflavin

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-10

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-8

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

5'-deoxyadenosine

dIDP

dITP

IDP

ITP

dATP

dAMP

GMP

dGTP

dGMP

1-(5-phospho-β-D-ribosyl)-AMP

AMP

ATP

dADP

ADP

dGDP

GTP

IMP

adenylo-succinate

GDP

isoguanine

8-oxo-dGTP

8-oxo-GTP

2'-deoxyguanosine

cyclic-AMP

hypoxanthine

cyclic-GMP

XMP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

inosine

adenosine

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dCTP

dTTP

dUTP

CTP

UTP

dCMP

dTMP

dUMP

CMP

UMP

dTDP

dUDP

dCDP

UDP

CDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

GDP-α-D-mannose

GDP-α-D-glucose

ADP-α-D-glucose

preQ₁

thymine

cytosine

uracil

adenine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-β-L-iduronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

coenzyme A

molybdopterin

oxidized coenzyme F₄₂₀-0

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

adenylyl molybdenum cofactor

bis(molybdenum cofactor)

bis(guanylyl molybdopterin) cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(S)-1-pyrroline-5-carboxylate

precorrin-3B

precorrin-6B

precorrin-7

precorrin-8x

precorrin-4

precorrin-5

precorrin-6A

precorrin-2

precorrin-3A

precorrin-1

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

orotate

2-hydroxychromene-2-carboxylate

(+)-dihydrokaempferol

(+)-taxifolin

(+)-dihydromyricetin

kaempferol

quercetin

myricetin

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

benzene

naphthalene

benzyl alcohol

2-hydroxylaminobenzoate

salicylaldehyde

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

urate

benzaldehyde

4-methylbenzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

3-(hydroxymethyl)-5-methylphenol

3,5-xylenol

4-methylcatechol

3-methylcatechol

catechol

2,3-dihydroxybenzoate

protocatechuate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

salicylate

trans-cinnamate

5-chloroprotocatechuate

benzoate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

4-aminobenzoate

diacetyl

methylglyoxal

glycolaldehyde

acetaldehyde

1-octanal

butan-1-al

1-propanal

formaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-xylopyranose

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

aldehydo-D-mannose

methanol

butan-1-ol

propan-1-ol

ethanol

phytol

1-octanol

glycerol

D-mannitol

myo-inositol

D-ononitol

D-galactosylononitol

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

galactinol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

6_G-kestotriose

1,1-kestotetraose

1-kestotriose

maltotriose

isoprimeverose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

4-deoxy-L-threo-hex-4-enopyranuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^G-phosphate

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

D-gluconate

L-gulonate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

(S)-(+)-allantoin

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

chorismate

(3E)-2-oxohex-3-enedioate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

fumarate

succinate

L-aspartate

(S)-malate

α,ω-9Z-octadecenedioate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

cis-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

acetate

formate

propanoate

(R)-lactate

octanoate

7-hydroxylaurate

laurate

decanoate

gentisate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

leukotriene-D4

leukotriene-E4

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

α-linolenate

linoleate

oleate

stearate

palmitate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(R)-pantoate

carbamate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-serine

glycine

L-asparagine

L-glutamine

L-threonine

L-cysteine

L-tyrosine

L-histidine

L-lysine

L-arginine

L-glutamate

L-isoleucine

L-leucine

L-valine

L-alanine

L-tryptophan

L-proline

L-phenylalanine

L-methionine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-alanine

D-lysine

L-aspartyl-4-phosphate

L-isoglutamine

L-2,4-diaminobutanoate

L-cystathionine

L,L-diaminopimelate

L-ornithine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

L-saccharopine

seleno-L-homocysteine

3-phospho-L-serine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

L-homoserine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

hypoglycin A

L-canaline

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine