ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C15156

dialurate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C12016

(lipoyl)adenylate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C14181

2-maleylacetate

C873

coproporphyrinogen III

C13928

urea-1-carboxylate

C2517

coniferaldehyde

C12178

histidinal

C12390

D-erythro-imidazole-glycerol-phosphate

C12315

5,6-dimethylbenzimidazole

C1038

α-ribazole

C1036

α-ribazole 5'-phosphate

C1102

O-acetyl-L-serine

C12403

2,3-epoxy-2,3-dihydrobenzoyl-CoA

C387

cis-3,4-dehydroadipyl-CoA semialdehyde

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11874

N-succinyl-2-amino-6-ketopimelate

C1353

3-phosphooxypyruvate

C949

lipid X

C3656

D-gluconate 6-phosphate

C10794

lipid A disaccharide (E. coli)

C6099

lipid IVA

C11635

L-tartrate

C11986

meso-tartrate

C13870

2-hydroxy-3-oxosuccinate

C1325

4-amino-4-deoxychorismate

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C11802

4'-phosphopantetheine

C295

(R)-4-phosphopantoate

C3295

2-keto-D-gluconate

C1454

2,5-didehydro-D-gluconate

C11982

methylamine

C689

N-ethylglycine

C12256

ethylamine

C352

2-iminoacetate

C12350

7,8-diaminopelargonate

C12355

dethiobiotin

C13950

pimeloyl-CoA

C1130

8-amino-7-oxononanoate

C14874

2-pyrone-4,6-dicarboxylate

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C11772

O-phosphoethanolamine

C14092

N-methylethanolamine phosphate

C13964

N-dimethylethanolamine phosphate

C11773

phosphocholine

C1480

2-protocatechuoylphloroglucinolcarboxylate

C927

carbon monoxide

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3850

5-amino-6-(D-ribitylamino)uracil

C1265

4-phosphooxy-L-threonine

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C11754

propanoyl phosphate

C13635

β-D-ribosylnicotinate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C12176

histidinol

C11832

orotidine 5'-phosphate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C13627

DNA without lesion

C4674

glutathione disulfide

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C12139

preuroporphyrinogen

C11836

hydroxypyruvate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12494

N-acetyl-D-muramate 6-phosphate

C12192

carbonic acid

C12409

creatinine

C11760

prephenate

C571

4-hydroxy-2-nonenal

C11606

thiamine phosphate

C11604

thiamine diphosphate

C3888

7-carboxy-7-deazaguanine

C13545

4-(γ-L-glutamylamino)butanoate

C12848

N5-carboxyaminoimidazole ribonucleotide

C1305

4-fumaryl-acetoacetate

C12171

homogentisate

C473

(2-hydroxyphenyl)acetate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C12029

S-ribosyl-L-homocysteine

C11493

2-phosphoglycolate

C11483

glycolate

C1108

acetyl phosphate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C6361

acetoacetate

C12254

ethanolamine

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C191

L-selenocystathionine

C12218

α-D-glucosamine 1-phosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C14924

carboxyphosphate

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1528

2-dehydropantoate

C11857

β-nicotinate D-ribonucleotide

C11715

quinolinate

C3262

3-methyl-2-oxobutanoate

C3417

(S)-3-methyl-2-oxopentanoate

C12369

3-dehydroquinate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C11653

shikimate

C1431

3-dehydroshikimate

C12162

hydrogen peroxide

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C12364

isopentenyl diphosphate

C14074

prenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1321

4-aminobutanoate

C6349

3-oxopropanoate

C11639

succinate semialdehyde

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C6614

O-ureido-L-homoserine

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C9422

nicotinate adenine dinucleotide

C1208

5-dehydro-D-gluconate

C12048

γ-L-glutamyl 5-phosphate

C12352

(S)-dihydroorotate

C2191

carbamoyl phosphate

C12214

(S)-4-amino-5-oxopentanoate

C891

citrate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C11826

oxalosuccinate

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C15306

2,3-didehydroadipyl-CoA

C932

canavaninosuccinate

C933

L-canavanine

C12056

L-arginino-succinate

C7865

urea

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C6444

oxaloacetate

C11479

phosphoenolpyruvate

C1231

5-aminolevulinate

C11767

porphobilinogen

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C928

CO2

C11543

H2O

C10349

glycerone phosphate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C9431

1,2-dihydro-β-NADP

C12274

enol-phenylpyruvate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C1010

ammonia

C4690

selenodiglutathione

C4688

glutathioselenol

C12394

6-phospho D-glucono-1,5-lactone

C12324

autoinducer 2

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C1283

4-maleyl-acetoacetate

C896

cis-3,4-dehydroadipyl-CoA

C11590

trans-2,3-dehydroadipyl-coA

C13854

hydrogen selenide

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C12247

L-homocysteine

C6043

4-methylphenol

C11480

phenylacetate

C803

ethylphosphate

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9800

adenosylcobyrate

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C6624

protoheme

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7676

protoporphyrin IX

C7118

hydrogen sulfide

C7121

oxygen

C6708

2-iminopropanoate

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C6744

CMP-N-acetyl-β-neuraminate

C6755

(R)-citramalate

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C12545

ethene

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C1869

caldariellaquinol

C5543

ubiquinol-8

C1867

3-demethylubiquinol-8

C10048

caldariellaquinone

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C8965

hydroxyl radical

C8958

superoxide

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C4960

N-acetyl-β-neuraminate

C7864

Fe3+

C4320

H+

C4328

ammonium

C11023

Fe2+

C7020

selenate

C7036

hydrogencarbonate

C7014

sulfate

C7017

selenite

C7025

OH-

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C4606

S-(hydroxymethyl)glutathione

C3998

methanethiol

C4678

glutathione

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3576

cadaverine

C3548

putrescine

C8545

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

C8537

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C7060

3-hexaprenyl-4-hydroxybenzoate

C6934

4-hydroxybenzoate

C6829

salicylaldehyde

C2915

menadiol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2584

ferulate

C4356

quercetin

C11421

protocatechuate

C11409

2,3-dihydroxybenzoate

C11429

salicylate

C8974

4-aminobenzoate

C13354

preQ0

C10611

(R)-lipoate

C10614

coenzyme A

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C6007

MoO2-molybdopterin cofactor

C6002

cytidylyl molybdenum cofactor

C10982

nicotinate

C10988

riboflavin

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10143

menadione

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4520

(25S)-3-oxocholest-4-en-26-oate

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C10102

cis-dienelactone

C10100

trans-dienelactone

C4899

3-methylglutaconyl-CoA

C4935

trans-feruloyl-CoA

C4937

3'-dephospho-CoA

C4922

isobutanoyl-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4920

isovaleryl-CoA

C5306

3-methylcrotonyl-CoA

C5014

phenylacetyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C4913

malonyl-CoA

C4901

succinyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5310

3-hydroxyisovaleryl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5314

2-methylacetoacetyl-CoA

C5298

acetyl-CoA

C5313

2-methylbutanoyl-CoA

C5294

benzoyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C6568

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

C7165

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7356

(3R)-3-hydroxypentanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C7164

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

C7176

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C10757

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

C10759

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14662

hexanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C2873

pristanoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C5890

myristoyl-CoA

C6558

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

C6562

hexadecanedioyl-CoA

C10762

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

C10758

3-oxoadipyl-CoA

C5843

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

C5845

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6079

3-oxo-myristoyl-CoA

C6075

3-oxooctadecanoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C8033

5-amino-4-imidazolecarboxyamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8923

α,ω-9Z-octadecenedioate

C8536

3-carboxy-cis,cis-muconate

C3358

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

C3359

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

C13457

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

C13463

(2R,3S)-2-methylisocitrate

C8544

cis-2-methylaconitate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3308

pyruvate

C11517

acetate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C3412

decanoate

C3409

octanoate

C3415

laurate

C3207

7-hydroxylaurate

C951

4-hydroxybutanoate

C11212

(R)-3-hydroxybutanoate

C538

18-hydroxyoleate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C13266

(15Z)-tetracosenoate

C13300

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

C5935

dinor-12-oxo-phytodienoate

C10590

α-linolenate

C6379

linoleate

C3387

stearate

C3383

palmitate

C13210

oleate

C13260

phytenate

C11482

(R)-pantoate

C11481

orotate

C11485

D-gluconate

C4985

(S)-1-pyrroline-5-carboxylate

C5032

carbamate

C3536

L-α-amino-ε-keto-pimelate

C5579

L-serine

C11443

creatine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C12067

glycine

C5581

L-proline

C5597

L-alanine

C5609

L-glutamine

C5588

L-leucine

C8797

D-glutamate

C5607

L-glutamate

C5605

L-histidine

C5584

L-lysine

C5642

L-arginine

C2469

L-phenylalanine

C5575

L-tryptophan

C5573

L-tyrosine

C8799

D-alanine

C12063

seleno-L-homocysteine

C12073

L-aspartyl-4-phosphate

C3402

3-phospho-L-serine

C3628

sarcosine

C13322

N-carbamoyl-L-aspartate

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C11955

O-acetyl-L-homoserine

C5580

L,L-diaminopimelate

C12231

L-ornithine

C5603

L-isoleucine

C5571

L-valine

C5595

L-cystathionine

C5577

L-threonine

C5583

L-methionine

C5612

L-cysteine

C12303

L-citrulline

C12227

O-succinyl-L-homoserine

C12237

L-canaline

C12233

L-glutamate-5-semialdehyde

C15292

S-adenosyl-L-methionine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12245

L-homoserine

C12203

S-adenosyl-L-homocysteine

C5585

meso-diaminopimelate

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3351

glyoxylate

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C11222

sn-glycero-3-phosphoethanolamine

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C3731

glycerol

C3450

ethanol

C10527

myo-inositol

C13576

1D-myo-inositol 1-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C5436

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

C5429

trehalose-cis-methoxy-mono-mycolate

C5437

6-O-trans-keto-mycolyl-trehalose 6-phosphate

C5430

trehalose-trans-keto-mono-mycolate

C5422

6-O-α-mycolyl-trehalose 6-phosphate

C5434

α, α'-trehalose 6-α-mycolate

C5425

6-O-cis-keto-mycolyl-trehalose 6-phosphate

C5435

trehalose-cis-keto-mono-mycolate

C5431

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

C5439

trehalose-trans-methoxy-mono-mycolate

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C15301

all-trans-nonaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10226

α-Kdo-(2→6)-lipid IVA

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4086

1-(β-D ribofuranosyl)nicotinamide

C6823

α,α-trehalose

C8835

β-D-fructofuranose

C2012

keto-D-fructose

C2143

D-xylulose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C14474

N-acetyl-α-D-mannosamine

C9494

D-glyceraldehyde

C2858

glycolaldehyde

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C6583

α,α-trehalose 6-phosphate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C7780

UDP-α-D-glucose

C1939

dTDP-α-D-glucose

C8422

CDP-α-D-glucose

C10263

ADP-α-D-glucose

C1015

GDP-α-D-glucose

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C8666

UDP-α-D-galactose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7804

UDP-α-D-galactofuranose

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8433

CDP-4-dehydro-6-deoxy-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10342

D-sedoheptulose 1,7-bisphosphate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C2125

α-D-glucose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C10604

D-ribulose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C3676

L-idonate

C2040

diacetyl

C6090

methylglyoxal

C3500

acetaldehyde

C3483

formaldehyde

C8744

dTMP

C8739

uracil

C8770

dUMP

C8720

dTDP

C8764

dTTP

C8772

dCTP

C8724

dUTP

C8761

CTP

C8760

UTP

C8755

dCMP

C8752

dUDP

C8714

UDP

C8733

dCDP

C8732

CDP

C2241

UMP

C2245

CMP

C2702

cytidine

C2706

uridine

C9454

adenine

C7649

isoguanine

C9540

preQ1

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7848

2'-deoxyguanosine

C7745

GTP

C7759

ITP

C7844

ATP

C7795

GDP

C7817

IDP

C7757

ADP

C7811

XMP

C7827

GMP

C7741

IMP

C7809

AMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7823

dADP

C7807

dGDP

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C7655

8-oxo-GTP

C7646

8-oxo-GMP

C7647

8-oxo-dGTP

C7837

8-oxo-dGMP

C10267

pppGpp

C10266

ppGpp

C7643

cyclic-GMP

C5552

5'-deoxyadenosine

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C10288

adenylo-succinate

C1817

cyclic di-3',5'-guanylate

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA