ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C435

bisorganyltrisulfane

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C446

5-hydroxyindole thiazolidine carboxylate

C1010

ammonia

C12274

enol-phenylpyruvate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C9431

1,2-dihydro-β-NADP

C15156

dialurate

C14102

6-aminohexanoate cyclic dimer

C1149

6-oxohexanoate

C1092

adipate

C3344

2-dehydro-3-deoxy-D-gluconate

C3253

2,5-dioxopentanoate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C4674

glutathione disulfide

C12394

6-phospho D-glucono-1,5-lactone

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C1457

(2R,4S)-2, 4-diaminopentanoate

C11826

oxalosuccinate

C1110

N4-(β-N-acetyl-D-glucosaminyl)-L-asparagine

C11934

N-acetyl-β-glucosaminylamine

C1291

(4-hydroxyphenyl)acetate

C11773

phosphocholine

C12848

N5-carboxyaminoimidazole ribonucleotide

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C13909

CDP-glycerol

C1112

ManNAc-GlcNAc-PP-undecaprenol

C12756

(2R)-2-amino-4-oxopentanoate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C891

citrate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1196

S-methyl-5'-thioadenosine

C7865

urea

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1353

3-phosphooxypyruvate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C13928

urea-1-carboxylate

C1531

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

C632

2-chloro-4-methyl-cis,cis-muconate

C565

4-methylmuconolactone

C631

4-chloro-2-methyl-cis,cis-muconate

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C14181

2-maleylacetate

C1391

3-mercaptopyruvate

C12390

D-erythro-imidazole-glycerol-phosphate

C1102

O-acetyl-L-serine

C12016

(lipoyl)adenylate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C3850

5-amino-6-(D-ribitylamino)uracil

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C352

2-iminoacetate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C11754

propanoyl phosphate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C6614

O-ureido-L-homoserine

C6349

3-oxopropanoate

C1321

4-aminobutanoate

C12192

carbonic acid

C12369

3-dehydroquinate

C1108

acetyl phosphate

C12162

hydrogen peroxide

C11715

quinolinate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C939

butanoyl phosphate

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C9422

nicotinate adenine dinucleotide

C11604

thiamine diphosphate

C3656

D-gluconate 6-phosphate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C873

coproporphyrinogen III

C6361

acetoacetate

C11483

glycolate

C6444

oxaloacetate

C1555

(S)-2,3-dihydrodipicolinate

C1198

5-dehydro-4-deoxy-D-glucarate

C191

L-selenocystathionine

C12492

1,6-anhydro-N-acetyl-β-muramate

C11780

D-phenylhydantoin

C5862

N-carbamoyl-D-phenylglycine

C11942

6-aminohexanoate linear dimer

C13579

6-aminohexanoate

C1223

5-aminopentanoate

C14180

dihydrolipoate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C12164

H2

C2263

4-prenylphlorisobutyrophenone

C12364

isopentenyl diphosphate

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C13627

DNA without lesion

C1231

5-aminolevulinate

C1038

α-ribazole

C12315

5,6-dimethylbenzimidazole

C1036

α-ribazole 5'-phosphate

C12586

α-D-ribose-1-methylphosphonate 5-phosphate

C12604

5-phospho-α-D-ribose 1,2-cyclic phosphate

C11857

β-nicotinate D-ribonucleotide

C11832

orotidine 5'-phosphate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C11654

selenophosphate

C12218

α-D-glucosamine 1-phosphate

C1528

2-dehydropantoate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C927

carbon monoxide

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C1325

4-amino-4-deoxychorismate

C1002

anthranilate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C12352

(S)-dihydroorotate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C12178

histidinal

C12176

histidinol

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11760

prephenate

C12254

ethanolamine

C14074

prenyl diphosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C6597

3-ureidopropanoate

C11539

xanthine

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C8406

5-hydroxyindole acetate

C15240

prop-2-ynal

C13868

propynoate

C11808

palmitaldehyde

C11646

dimethylsulfoniopropanoate

C12117

imidazole acetaldehyde

C1287

4-imidazoleacetate

C12385

D-glucurono-6,3-lactone

C1342

3,4-dihydroxyphenylacetaldehyde

C14182

(2E)-hexadecenal

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C11639

succinate semialdehyde

C11479

phosphoenolpyruvate

C11802

4'-phosphopantetheine

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11653

shikimate

C1431

3-dehydroshikimate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C11634

tartronate semialdehyde

C15283

poly(ribitol phosphate)

C13813

O-D-alanyl-poly(ribitol phosphate)

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C13798

2-phenylethanol

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C13800

3-methylbutanol

C13801

3-methylbutanal

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C12102

isobutanol

C13799

2-methylbutanol

C11976

2-methylbutanal

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C15056

salicyl alcohol

C11932

N-acetyl-D-galactosamine 6-phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C15282

D-galactosamine-6-phosphate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C10349

glycerone phosphate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C3421

formate

C11767

porphobilinogen

C12139

preuroporphyrinogen

C11711

(R)-1-amino-2-propanol O-2-phosphate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C928

CO2

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C11543

H2O

C2191

carbamoyl phosphate

C14924

carboxyphosphate

C10799

DNA with lesion

C6043

4-methylphenol

C12247

L-homocysteine

C3865

phosphonoacetaldehyde

C12116

(2-aminoethyl)phosphonate

C13422

hydrogen cyanide

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9865

Mg-protoporphyrin

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9842

cobalt-precorrin-6B

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9800

adenosylcobyrate

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9855

adenosyl-cobinamide phosphate

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9869

cob(I)inamide

C9807

adenosylcobinamide

C6624

protoheme

C7676

protoporphyrin IX

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7632

siroheme

C7118

hydrogen sulfide

C7121

oxygen

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C11281

2-chloroacetate

C8420

sn-glycerol 1-phosphate

C8419

sn-glycerol 3-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C11476

(R)-glycerate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6617

N-acetyl-D-mannosamine 6-phosphate

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C4960

N-acetyl-β-neuraminate

C2860

fluoroacetaldehyde

C11509

fluoroacetate

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C11273

5-chloro-2-methyl-dienelactone

C11272

5-chloro-2-methyl-maleylacetate

C11267

2-chloro-3-methyl-dienelactone

C11269

2-chloro-3-methyl-maleylacetate

C11268

2-chloro-5-methyl-dienelactone

C11271

2-chloro-5-methyl-maleylacetate

C11266

3-chloro-2-methyl-dienelactone

C11270

3-chloro-2-methyl-maleylacetate

C11279

5-chloromaleylacetate

C11232

3-chloro-cis,cis-muconate

C11261

2,5-dichloro-4-methyl-muconolactone

C11241

2-chloro-2-(2-chloro-5-oxofuran-2-yl)acetate

C11280

2,3-dichloro-cis,cis-muconate

C11265

3,5-dichloro-2-methyl-muconolactone

C11262

2,5-dichloro-3-methyl-muconate

C11244

3,6-dichloro-3a-methyl-dihydro-3H-furo[3,2-b]furan-2,5-dione

C11264

2,5-dichloro-3-methyl-muconolactone

C11276

(+)-5-chloromuconolactone

C11242

2-(2,4-dichloro-5-oxofuran-2-yl)propanoate

C11263

3,5-dichloro-2-methyl-muconate

C11243

2-chloro-2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

C11274

2,3-dichloro-5-methyl-muconate

C11275

(+)-2-chloromuconolactone

C11283

2-chloro-cis,cis-muconate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C5752

(1R,2S)-3,4-dichloro-6-methylcyclohexa-3,5-diene-1,2-diol

C5794

3,4-dichloro-6-methylcatechol

C5709

3,4-dichlorotoluene

C5754

5-chloro-3-methylcatechol

C5743

3,6-dichloro-4-methylcatechol

C5685

(1R,2S)-3,6-dichloro-4-methylcyclohexa-3,5-diene-1,2-diol

C5801

2,5-dichlorotoluene

C5760

2,4-dichlorotoluene

C5785

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

C5697

4,6-dichloro-3-methylcatechol

C5739

4,5-dichlorobenzene-1,2-diol

C7864

Fe3+

C4318

K+

C4326

Na+

C4320

H+

C4328

ammonium

C11023

Fe2+

C11006

Co2+

C11005

Zn2+

C11011

Cu2+

C11019

Ca2+

C11009

Mg2+

C7034

hydrogensulfite

C7025

OH-

C8958

superoxide

C7022

selenide

C7024

thiosulfate

C7016

sulfite

C7028

nitrite

C7030

nitrate

C7036

hydrogencarbonate

C7057

molybdate

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C8965

hydroxyl radical

C9077

(2E,6E)-farnesyl diphosphate

C11222

sn-glycero-3-phosphoethanolamine

C11219

glycerophosphoserine

C11220

glycerophosphoglycerol

C2930

ferrichrome

C1779

N1-(3-aminopropyl)agmatine

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3610

N1-acetylspermidine

C3583

N1-acetylspermine

C3592

N-acetylputrescine

C3574

spermidine

C3564

spermine

C3548

putrescine

C4606

S-(hydroxymethyl)glutathione

C1476

γ-L-glutamyl-[(S)-allyl]-L-cysteine

C2490

S-allyl-L-cysteine

C1461

γ-L-glutamyl-(S)-methyl-L-cysteine

C1464

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

C4716

S-trans-1-propenyl-L-cysteine

C4740

S-methyl-L-methionine

C4742

3-dimethylsulfoniopropionaldehyde

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4678

glutathione

C3978

thiocyanate

C3998

methanethiol

C4644

S-sulfanylglutathione

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C10791

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

C10093

2-methyl-trans-dienelactone

C10095

2-methyl-cis-dienelactone

C10099

5-chloro-trans-dienelactone

C10096

5-chloro-3-methyl-cis-dienelactone

C10097

2-chloro-4-methyl-cis-dienelactone

C10094

2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

C10102

cis-dienelactone

C10100

trans-dienelactone

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C4927

(E)-glutaconyl-CoA

C5188

dihomo γ-linolenoyl-CoA

C5302

4-hydroxybutanoyl-CoA

C4937

3'-dephospho-CoA

C4901

succinyl-CoA

C4913

malonyl-CoA

C4981

CoA-disulfide

C5314

2-methylacetoacetyl-CoA

C4922

isobutanoyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5298

acetyl-CoA

C1337

crotonyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C5635

oleoyl-CoA

C491

18-hydroxyoleoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7176

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C14662

hexanoyl-CoA

C14697

decanoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C5890

myristoyl-CoA

C6562

hexadecanedioyl-CoA

C6558

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

C6200

3-oxohexanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6201

3-oxododecanoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C5845

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

C5843

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C1235

methane

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C6218

(+)-7-epi-jasmonate

C9096

(indol-3-yl)acetate

C10994

thiamine

C10982

nicotinate

C10988

riboflavin

C2810

all-trans-retinal

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C4200

pyridoxal

C4210

pyridoxal 5'-phosphate

C4208

pyridoxine

C4214

pyridoxine 5'-phosphate

C4216

pyridoxamine

C4188

pyridoxamine 5'-phosphate

C10049

FMNH2

C10052

FMN

C5394

(R)-NADHX

C5392

(S)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C10048

caldariellaquinone

C1869

caldariellaquinol

C11516

glycine betaine

C7649

isoguanine

C7647

8-oxo-dGTP

C7655

8-oxo-GTP

C7811

XMP

C10267

pppGpp

C10266

ppGpp

C7751

dGTP

C7783

dATP

C7827

GMP

C7741

IMP

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7785

hypoxanthine

C7745

GTP

C7823

dADP

C7807

dGDP

C7795

GDP

C7809

AMP

C7844

ATP

C7757

ADP

C9419

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

C9420

two adjacent thymidines in DNA

C15085

guanosine

C15088

adenosine

C15091

inosine

C15094

xanthosine

C2702

cytidine

C2706

uridine

C2519

thymidine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C10280

5-hydroxy-CMP

C8764

dTTP

C8772

dCTP

C8724

dUTP

C8760

UTP

C8761

CTP

C8755

dCMP

C8770

dUMP

C8744

dTMP

C2241

UMP

C2245

CMP

C8720

dTDP

C8752

dUDP

C8733

dCDP

C8714

UDP

C8732

CDP

C4240

reduced β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C10263

ADP-α-D-glucose

C9540

preQ1

C10601

thymine

C8739

uracil

C9455

guanine

C9454

adenine

C13346

CDP-choline

C7801

5,6-dihydrothymine

C4012

5,6-dihydrouracil

C7780

UDP-α-D-glucose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C8666

UDP-α-D-galactose

C7722

UDP-α-D-glucuronate

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10611

(R)-lipoate

C10614

coenzyme A

C6003

guanylyl molybdenum cofactor

C6007

MoO2-molybdopterin cofactor

C5998

thio-molybdenum cofactor

C4985

(S)-1-pyrroline-5-carboxylate

C2305

precorrin-1

C2311

precorrin-2

C2297

precorrin-8x

C1705

sirohydrochlorin

C2001

hydantoin

C12742

7,8-dihydrolumazine

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12714

7,8-dihydropterin

C12696

7,8-dihydromonapterin

C12664

7,8-dihydroneopterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C10609

7,8-dihydropteroate

C8741

dipicolinate

C11481

orotate

C6829

salicylaldehyde

C3093

urate

C7139

4-tyrosol

C8491

vanillyl mandelate

C8490

3-methoxy-4-hydroxyphenylglycol

C3649

benzaldehyde

C3647

phenylacetaldehyde

C3641

(4-hydroxyphenyl)acetaldehyde

C8335

(indol-3-yl)acetaldehyde

C2903

hydroquinone

C11409

2,3-dihydroxybenzoate

C2762

3,4-dihydroxymandelate

C2760

3,4-dihydroxyphenylacetate

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C11429

salicylate

C8968

benzoate

C8974

4-aminobenzoate

C2040

diacetyl

C6090

methylglyoxal

C2858

glycolaldehyde

C3485

butan-1-al

C3529

1-octanal

C3523

1-propanal

C3500

acetaldehyde

C3494

isobutanal

C3483

formaldehyde

C6246

(S)-lactaldehyde

C14704

dodecanal

C14707

decanal

C14804

phytenal

C9494

D-glyceraldehyde

C2061

α-D-ribofuranose

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C3449

butan-1-ol

C3447

propan-1-ol

C3450

ethanol

C3448

methanol

C14807

phytol

C3731

glycerol

C6571

L-iditol

C6569

D-sorbitol

C3673

D-mannitol 1-phosphate

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C2012

keto-D-fructose

C5458

keto-L-sorbose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C13570

N-acetyl-β-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C2143

D-xylulose

C8835

β-D-fructofuranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C11625

1-O-acetyl-α-maltose

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6669

N-monoacetylchitobiose 6'-phosphate

C6671

N,N'-diacetylchitobiose 6'-phosphate

C8811

α-D-glucopyranose 1-phosphate

C5615

D-glyceraldehyde 3-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10340

D-erythrose 4-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C10334

arbutin-6-phosphate

C2115

α-D-galactose 6-phosphate

C10331

salicin 6-phosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2116

β-D-galactose 6-phosphate

C8815

α-D-galactose 1-phosphate

C8704

D-xylulose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C10607

L-ribulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C15351

erythrulose 1-phosphate

C8819

L-fuculose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C11487

D-mannonate

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C8321

geranyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C10125

β-carotene 15,15' epoxide

C10927

15,15'-dihydroxy-β-carotene

C8158

β-carotene

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C2258

phlorisovalerophenone

C2266

deoxycohumulone

C2261

4-prenylphlorisovalerophenone

C2269

deoxyhumulone

C668

iron(III) dicitrate

C11317

6-caprolactam

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C8934

3-methyl-cis,cis-muconate

C8950

chorismate

C6443

fumarate

C6442

succinate

C5596

L-aspartate

C2802

(S)-malate

C8928

D-galactarate

C8919

D-glucarate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3351

glyoxylate

C3308

pyruvate

C3420

propanoate

C3418

butanoate

C3415

laurate

C3409

octanoate

C3412

decanoate

C951

4-hydroxybutanoate

C11212

(R)-3-hydroxybutanoate

C6186

(S)-lactate

C6185

(R)-lactate

C3387

stearate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13298

(3E,5Z)-tetradecadienoate

C3383

palmitate

C13200

(2E)-hexadecenoate

C6375

di-homo-γ-linolenate

C13260

phytenate

C11482

(R)-pantoate

C11517

acetate

C5032

carbamate

C5579

L-serine

C5573

L-tyrosine

C5577

L-threonine

C5643

L-asparagine

C12067

glycine

C5609

L-glutamine

C5612

L-cysteine

C5605

L-histidine

C5584

L-lysine

C5642

L-arginine

C5607

L-glutamate

C5588

L-leucine

C5603

L-isoleucine

C5581

L-proline

C2469

L-phenylalanine

C5597

L-alanine

C5571

L-valine

C5583

L-methionine

C11441

β-alanine

C11439

β-glutamate

C11434

(R)-3-amino-2-methylpropanoate

C8797

D-glutamate

C8796

D-proline

C12223

D-ornithine

C8805

D-aspartate

C8799

D-alanine

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C12073

L-aspartyl-4-phosphate

C12231

L-ornithine

C13322

N-carbamoyl-L-aspartate

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C12063

seleno-L-homocysteine

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C6936

S-methyl-L-cysteine

C13320

N-carbamoylglycine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C12233

L-glutamate-5-semialdehyde

C12227

O-succinyl-L-homoserine

C12237

L-canaline

C12229

O-phospho-L-homoserine

C15292

S-adenosyl-L-methionine

C12203

S-adenosyl-L-homocysteine

C12245

L-homoserine

C12239

L-aspartate 4-semialdehyde

C5585

meso-diaminopimelate

C8545

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

C8537

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine