an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-deoxy-D-arabino-heptulosonate 7-phosphate

(4-hydroxyphenyl)acetate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-dehydropantoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-maleylacetate

orotidine 5'-phosphate

N-Formyl-L-kynurenine

3-hydroxyanthranilate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

3-dehydroquinate

3-dehydroshikimate

porphobilinogen

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

β-D-ribosylnicotinate

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

5-amino-6-(D-ribitylamino)uracil

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

prephenate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

D-gluconate 6-phosphate

5-oxo-L-proline

carbon monoxide

3-hydroxypropanoate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

L-histidinol phosphate

histidinol

glycolate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

(S)-2-amino-6-oxohexanoate

acetyl phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-phosphooxypyruvate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

citraconate

(2R,3S)-3-methylmalate

(2S)-lactyl-2-diphospho-5'-guanosine

thiamine phosphate

thiamine diphosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4'-phosphopantetheine

2-C-methyl-D-erythritol 4-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-mercaptopyruvate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

hydroxyatrazine

N-isopropylammelide

ethylamine

(S)-ureidoglycolate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

carbonic acid

coproporphyrinogen III

hydrogen peroxide

4-hydroxy-2-nonenal

prenyl diphosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

7,8-diaminopelargonate

dethiobiotin

pimeloyl-CoA

8-amino-7-oxononanoate

(2-hydroxyphenyl)acetate

ethanolamine

3-(4-deoxy-β-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine

L-canavanine

xanthine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-dehydro-3-deoxy-D-gluconate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

salicyl alcohol

methylsalicylate

β-nicotinate D-ribonucleotide

acetoacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

carboxyphosphate

homogentisate

4-maleyl-acetoacetate

urea

anthranilate

N-(5-phosphoribosyl)-anthranilate

isopentenyl diphosphate

5-dehydro-4-deoxy-D-glucarate

4-imidazolone-5-propanoate

urocanate

α-D-glucosamine 1-phosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

5-dehydro-D-gluconate

4-amino-4-deoxychorismate

5-phospho-β-D-ribosylamine

nicotinate adenine dinucleotide

oxalosuccinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

preuroporphyrinogen

hydrogen selenide

O-acetyl-L-serine

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

CO₂

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

glycerone phosphate

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

carbamoyl phosphate

oxaloacetate

citrate

H₂O

phosphoenolpyruvate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

ammonia

enol-phenylpyruvate

S-(hydroxymethyl)mycothiol

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

4-oxoglutaramate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

S-ribosyl-L-homocysteine

autoinducer 2

isopropylamine

selenodiglutathione

glutathioselenol

formamide

glutathione disulfide

H₂

5-aminopentanoate

(2R,4S)-2, 4-diaminopentanoate

(2R)-2-amino-4-oxopentanoate

2-amino-3-carboxymuconate-6-semialdehyde

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

(R)-4'-phosphopantothenoyl-L-cysteine

(S)-dihydroorotate

shikimate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

(2S)-4-acetamido-2-aminobutanoate

ectoine

2,5-dioxopentanoate

(S)-2,3,4,5-tetrahydrodipicolinate

6-phospho D-glucono-1,5-lactone

DNA without lesion

D-erythro-imidazole-glycerol-phosphate

histidinal

methylamine

N-ethylglycine

2-iminoacetate

L-selenocystathionine

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

cyclohexanone

ε-caprolactone

γ-L-glutamyl 5-phosphate

imidazole acetol-phosphate

N6,N6,O-tridemethylpuromycin

N-acetyl-N6,N6,O-tridemethylpuromycin

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

N⁵-carboxyaminoimidazole ribonucleotide

4-fumaryl-acetoacetate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

quinolinate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

phenylacetate

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

chlorophyll a

chlorophyllide a

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

hemin

adenosyl-cobinamide phosphate

cobalt-sirohydrochlorin

cobalt-precorrin-2

protoheme

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

pheophorbide a

pheophorbide b

pheophytin a

pheophytin b

oxygen

hydrogen sulfide

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

CMP-N-acetyl-β-neuraminate

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

3-chloro-4-(3-chloro-2-nitrosophenyl)-1H-pyrrole

N-[2-chloro-6-(4-chloro-1H-pyrrol-3-yl)phenyl]hydroxylamine

pyrrolnitrin

N-acetyl-β-neuraminate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

7-chloro-L-tryptophan

monodechloroaminopyrrolnitrin

aminopyrrolnitrin

Fe³⁺

K⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

Co²⁺

Cu²⁺

superoxide

nitrate

selenate

sulfite

hydrogencarbonate

thiosulfate

sulfate

hydrogensulfite

selenite

OH^-

molybdate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

ferrichrome

glycine betaine

betaine aldehyde

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

spermine

putrescine

spermidine

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

thiocyanate

glutathione

mycothiol

deacetylmycothiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

3-sulfino-L-alanine

ergosteryl oleate

lanosteryl oleate

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

isobutanoyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

malonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

succinyl-CoA

3'-dephospho-CoA

6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5Z)-tetradecenoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

isovaleryl-CoA

methylacrylyl-CoA

(+)-7-epi-jasmonoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

phytanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

lanosterol

ergosterol

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

riboflavin

nicotinate

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

2'-deoxyguanosine

cyclic-AMP

dGMP

dAMP

2'-deoxyadenosine

2'-deoxyinosine

5'-deoxyadenosine

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

XMP

GMP

IMP

ITP

IDP

dATP

dGTP

GTP

dADP

ADP

dGDP

GDP

ATP

AMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

pppGpp

ppGpp

dIDP

dITP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

adenosine

inosine

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

UTP

CTP

dCMP

dTMP

dUMP

UMP

CMP

dUDP

dCDP

dTDP

UDP

CDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

GDP-α-D-glucose

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

ADP-α-D-glucose

thymine

uracil

guanine

adenine

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-O-demethyl-β-L-noviose

dTDP-4-dehydro-5-methyl-β-L-rhamnose

dTDP-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

(S)-1-pyrroline-5-carboxylate

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

orotate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

futalosine

dehypoxanthine futalosine

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

cyanuric acid

atrazine

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

hydroquinone

3,4-dihydroxyphenylacetate

protocatechuate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

diacetyl

acetone

methylglyoxal

formaldehyde

acetaldehyde

1-octanal

butan-1-al

(S)-lactaldehyde

phytenal

D-glyceraldehyde

L-glyceraldehyde

α-D-ribofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

α-D-galactopyranose

β-D-galactopyranose

ethanol

methanol

butan-1-ol

phytol

1-octanol

glycerol

D-mannitol

myo-inositol

1D-chiro-inositol

scyllo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

maltotriose

raffinose

an unsaturated pectate trisaccharide

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

sucrose

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

keto-L-rhamnulose

4-deoxy-L-threo-hex-4-enopyranuronate

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α-maltose 1-phosphate

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

D-mannonate

D-galactonate

D-gluconate

L-idonate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

(-)-geosmin

(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol

(8S,9S,10S)-8,10-dimethyl-1-octalin

geranyl diphosphate

trans,octacis-decaprenyl phosphate

1-hydroxyneurosporene

methoxyneurosporene

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

phlorisovalerophenone

deoxyhumulone

deoxycohumulone

4-prenylphlorisovalerophenone

iron(III) dicitrate

4-amino-2-(methanethioyl)-5-oxo-3-sulfanylpyrrolidine-2-carboxylate

(5E)-3-amino-4-sulfanyl-5-(sulfanylmethylidene)pyrrolidin-2-one

6-aminopenicillanate

isopenicillin N

penicillin K

penicillin G

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

allantoate

(S)-(+)-allantoin

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

chorismate

(3E)-2-oxohex-3-enedioate

L-aspartate

fumarate

succinate

(S)-malate

α,ω-9Z-octadecenedioate

D-glucarate

(2R,3S)-2-methylisocitrate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

(S)-lactate

decanoate

7-hydroxylaurate

laurate

octanoate

(15Z)-tetracosenoate

leukotriene-D4

leukotriene-E4

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

linoleate

α-linolenate

stearate

oleate

palmitate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

phytenate

(R)-pantoate

5-deoxy-D-glucuronate

L-kynurenine

carbamate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-serine

L-glutamine

L-threonine

glycine

L-cysteine

L-tyrosine

L-asparagine

L-lysine

L-histidine

L-arginine

L-glutamate

L-proline

L-tryptophan

L-alanine

L-selenocysteine

L-valine

L-isoleucine

L-leucine

L-methionine

L-phenylalanine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-proline

D-alanine

D-ornithine

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

L-cystathionine

L,L-diaminopimelate

L-ornithine

L-isoglutamine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

L-saccharopine

S-sulfanyl-L-cysteine

seleno-L-homocysteine

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

L-citrulline

1-aminocyclopropane-1-carboxylate

L-canaline

hypoglycin A

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-cystine

L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine