ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C435

bisorganyltrisulfane

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C12054

L-dehydro-ascorbate

C446

5-hydroxyindole thiazolidine carboxylate

C13702

1-piperideine 6-carboxylate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C1283

4-maleyl-acetoacetate

C12171

homogentisate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C4690

selenodiglutathione

C4688

glutathioselenol

C4674

glutathione disulfide

C6099

lipid IVA

C13983

α-D-galacturonate 1-phosphate

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C3376

(S)-4-hydroxy-2-oxohexanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C1357

3-oxopimeloyl-CoA

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C12848

N5-carboxyaminoimidazole ribonucleotide

C13192

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

C12490

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

C11562

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

C15156

dialurate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12494

N-acetyl-D-muramate 6-phosphate

C6614

O-ureido-L-homoserine

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C3821

5-methylcytosine

C13854

hydrogen selenide

C12178

histidinal

C12125

imidazole acetol-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C12315

5,6-dimethylbenzimidazole

C1038

α-ribazole

C1036

α-ribazole 5'-phosphate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C11711

(R)-1-amino-2-propanol O-2-phosphate

C1633

(R)-1-aminopropan-2-ol

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C12044

L-histidinol phosphate

C12176

histidinol

C13913

N-carbamoylputrescine

C14181

2-maleylacetate

C3912

phosphonoacetate

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C13950

pimeloyl-CoA

C14177

propane-1,3-diamine

C863

carboxyspermidine

C13257

carboxynorspermidine

C11849

norspermidine

C1303

4-guanidinobutyramide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C12369

3-dehydroquinate

C8407

5-hydroxyindole acetaldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C12102

isobutanol

C13800

3-methylbutanol

C13801

3-methylbutanal

C13799

2-methylbutanol

C11976

2-methylbutanal

C13798

2-phenylethanol

C13440

2-methyl-trans-aconitate

C12202

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

C1538

2-C-methyl-D-erythritol 4-phosphate

C6359

(S)-2-acetolactate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1438

(2S)-2-isopropylmalate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11826

oxalosuccinate

C8401

serotonin O-sulfate

C8399

5-hydroxytryptophol

C8398

5-hydroxytryptophol sulfate

C8397

6-hydroxymelatonin

C8396

6-sulfatoxymelatonin

C8395

N-acetyl-serotonin sulfate

C13717

dopamine 3-O-sulfate

C11653

shikimate

C1431

3-dehydroshikimate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C1130

8-amino-7-oxononanoate

C1078

(S)-2-amino-6-oxohexanoate

C12350

7,8-diaminopelargonate

C12355

dethiobiotin

C11754

propanoyl phosphate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C1108

acetyl phosphate

C1325

4-amino-4-deoxychorismate

C2191

carbamoyl phosphate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C12352

(S)-dihydroorotate

C12381

D-mannosyl-1-phosphoundecaprenol

C12218

α-D-glucosamine 1-phosphate

C13716

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

C11832

orotidine 5'-phosphate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11760

prephenate

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C15180

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

C1399

3-hydroxypimeloyl-CoA

C11784

phenyl phosphate

C939

butanoyl phosphate

C1297

4-hydroxybenzaldehyde

C12402

cyclohex-1,5-diene-1-carbonyl-CoA

C1155

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

C1148

6-oxocyclohex-1-ene-1-carbonyl-CoA

C12078

itaconate

C965

benzoylsuccinyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11802

4'-phosphopantetheine

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C1010

ammonia

C1445

adenosine 3',5'-bisphosphate

C11794

3'-phosphoadenylyl-sulfate

C12394

6-phospho D-glucono-1,5-lactone

C3656

D-gluconate 6-phosphate

C1528

2-dehydropantoate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C1196

S-methyl-5'-thioadenosine

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C15238

5-deoxy-α-ribose 1-phosphate

C11836

hydroxypyruvate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C891

citrate

C3417

(S)-3-methyl-2-oxopentanoate

C3319

4-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C11654

selenophosphate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C927

carbon monoxide

C352

2-iminoacetate

C1305

4-fumaryl-acetoacetate

C1102

O-acetyl-L-serine

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C3888

7-carboxy-7-deazaguanine

C12016

(lipoyl)adenylate

C11479

phosphoenolpyruvate

C6444

oxaloacetate

C12274

enol-phenylpyruvate

C1353

3-phosphooxypyruvate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1440

nigerose

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C12048

γ-L-glutamyl 5-phosphate

C11857

β-nicotinate D-ribonucleotide

C9422

nicotinate adenine dinucleotide

C11606

thiamine phosphate

C11604

thiamine diphosphate

C13627

DNA without lesion

C11767

porphobilinogen

C12139

preuroporphyrinogen

C6361

acetoacetate

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C12288

(E)-2-benzylidenesuccinyl-CoA

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C15306

2,3-didehydroadipyl-CoA

C12164

H2

C1184

5-phospho-β-D-ribosylamine

C12214

(S)-4-amino-5-oxopentanoate

C1231

5-aminolevulinate

C12364

isopentenyl diphosphate

C14074

prenyl diphosphate

C2263

4-prenylphlorisobutyrophenone

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C1265

4-phosphooxy-L-threonine

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C285

coenzyme B

C13751

methanophenazine

C283

CoB-CoM heterodisulfide

C12331

dihydromethanophenazine

C12192

carbonic acid

C873

coproporphyrinogen III

C928

CO2

C10349

glycerone phosphate

C11715

quinolinate

C12162

hydrogen peroxide

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C11543

H2O

C6043

4-methylphenol

C12247

L-homocysteine

C10799

DNA with lesion

C11480

phenylacetate

C9822

cobalt-precorrin-3

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C5221

adenosylcobalamin

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9799

cobalt-precorrin-2

C9818

cobalt-precorrin-6A

C9845

cobalt-sirohydrochlorin

C9821

cobalt-factor III

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9813

cobalt-precorrin-5B

C9855

adenosyl-cobinamide phosphate

C9800

adenosylcobyrate

C9807

adenosylcobinamide

C6624

protoheme

C2255

N2

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7118

hydrogen sulfide

C7121

oxygen

C8419

sn-glycerol 3-phosphate

C8420

sn-glycerol 1-phosphate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6744

CMP-N-acetyl-β-neuraminate

C6755

(R)-citramalate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C8959

monodehydroascorbate radical

C8962

nitric oxide

C8964

5'-deoxyadenosin-5'-yl radical

C4960

N-acetyl-β-neuraminate

C4734

dimethyl sulfide

C4740

S-methyl-L-methionine

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4678

glutathione

C3998

methanethiol

C4644

S-sulfanylglutathione

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C12587

L-cysteate

C12637

3-sulfopyruvate

C12629

coenzyme M

C4328

ammonium

C4320

H+

C11023

Fe2+

C11006

Co2+

C11007

Ni2+

C1689

trimethyl sulfonium

C7034

hydrogensulfite

C7017

selenite

C7057

molybdate

C7024

thiosulfate

C7014

sulfate

C7028

nitrite

C7020

selenate

C7022

selenide

C7016

sulfite

C7036

hydrogencarbonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1434

D-alanyl-D-alanine

C6708

2-iminopropanoate

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3548

putrescine

C3574

spermidine

C13166

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C8325

N-acetyl-serotonin

C13157

serotonin

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C7315

thyroxine sulfate

C12564

3,5,3'-triiodo-L-thyronine

C7338

triiodothyronine sulfate

C7050

L-thyroxine

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C10996

nicotinamide

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10542

androst-4-ene-3,17-dione

C6218

(+)-7-epi-jasmonate

C9096

(indol-3-yl)acetate

C5313

2-methylbutanoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5014

phenylacetyl-CoA

C4927

(E)-glutaconyl-CoA

C4924

glutaryl-CoA

C5294

benzoyl-CoA

C5314

2-methylacetoacetyl-CoA

C5302

4-hydroxybutanoyl-CoA

C5282

itaconyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5102

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5092

(3R)-hydroxy-5-trans-dodecenoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C4922

isobutanoyl-CoA

C4937

3'-dephospho-CoA

C4913

malonyl-CoA

C4920

isovaleryl-CoA

C5306

3-methylcrotonyl-CoA

C4899

3-methylglutaconyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C4901

succinyl-CoA

C5035

4-hydroxybenzoyl-CoA

C4911

methylacrylyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5298

acetyl-CoA

C5188

dihomo γ-linolenoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C6146

(2E)-octadec-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C7343

(S)-malyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C2744

(S)-3-hydroxyhexadecanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C5879

(3R)-3-hydroxyoctadecanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C10758

3-oxoadipyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6198

3-oxodecanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C10076

L-galactono-1,4-lactone

C10102

cis-dienelactone

C10100

trans-dienelactone

C10049

FMNH2

C10052

FMN

C10053

FAD

C10050

FADH2

C5392

(S)-NADHX

C5394

(R)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C12718

molybdopterin

C10611

(R)-lipoate

C10614

coenzyme A

C6007

MoO2-molybdopterin cofactor

C10597

7,8-dihydrofolate monoglutamate

C7134

tetrahydropteroyl tri-L-glutamate

C7129

5,6,7,8-tetrahydrofolate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C10986

L-ascorbate

C10982

nicotinate

C10988

riboflavin

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4985

(S)-1-pyrroline-5-carboxylate

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12702

cyclic pyranopterin phosphate

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12668

molybdopterin adenine dinucleotide

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12678

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12674

7,8-dihydroneopterin 2',3'-cyclic phosphate

C10609

7,8-dihydropteroate

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C9454

adenine

C9455

guanine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7785

hypoxanthine

C7743

dAMP

C7840

dGMP

C7783

dATP

C7751

dGTP

C7749

dITP

C7823

dADP

C7807

dGDP

C7747

dIDP

C7817

IDP

C7795

GDP

C7757

ADP

C7811

XMP

C7827

GMP

C7741

IMP

C7809

AMP

C7759

ITP

C7745

GTP

C7844

ATP

C8707

cytosine

C8747

uridine 2'3'-cyclic monophosphate

C6462

uridine 3'-monophosphate

C8750

cytidine 2',3'-cyclic monophosphate

C6460

cytidine-3'-monophosphate

C8755

dCMP

C8770

dUMP

C11481

orotate

C8739

uracil

C8764

dTTP

C8732

CDP

C8761

CTP

C8733

dCDP

C8772

dCTP

C8752

dUDP

C8724

dUTP

C8760

UTP

C8714

UDP

C8744

dTMP

C8720

dTDP

C7804

UDP-α-D-galactofuranose

C7794

UDP-N-acetyl-α-D-quinovosamine

C7826

UDP-N-acetyl-α-D-fucosamine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C8567

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

C8559

UDP-2-acetamido-2,6-dideoxy-α-D-xylo-hex-4-ulose

C5126

UDP-4-amino-4-deoxy-β-L-arabinopyranose

C8562

UDP-β-L-threo-pentapyranos-4-ulose

C7790

UDP-N-acetyl-α-D-mannosamine

C8666

UDP-α-D-galactose

C7722

UDP-α-D-glucuronate

C7764

UDP-α-D-galacturonate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7780

UDP-α-D-glucose

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5640

UDP-N-acetyl-α-D-galactosamine

C7444

UDP-N-acetyl-α-D-glucosamine

C7720

UDP-α-D-xylose

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1939

dTDP-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C6945

5-fluorouracil

C2706

uridine

C2702

cytidine

C10601

thymine

C2241

UMP

C2245

CMP

C9540

preQ1

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C7041

toluene

C7139

4-tyrosol

C6934

4-hydroxybenzoate

C6975

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

C6868

futalosine

C6973

dehypoxanthine futalosine

C7015

cyclic dehypoxanthine futalosine

C8490

3-methoxy-4-hydroxyphenylglycol

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C11421

protocatechuate

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C2756

dopamine

C8974

4-aminobenzoate

C8968

benzoate

C8950

chorismate

C6443

fumarate

C5596

L-aspartate

C6442

succinate

C2802

(S)-malate

C8536

3-carboxy-cis,cis-muconate

C8542

(2S,3S)-2-methylcitrate

C13463

(2R,3S)-2-methylisocitrate

C8544

cis-2-methylaconitate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C6186

(S)-lactate

C6185

(R)-lactate

C3420

propanoate

C11517

acetate

C3308

pyruvate

C3421

formate

C3418

butanoate

C3412

decanoate

C3409

octanoate

C6371

3-oxoadipate

C13266

(15Z)-tetracosenoate

C13210

oleate

C13298

(3E,5Z)-tetradecadienoate

C6375

di-homo-γ-linolenate

C6379

linoleate

C10590

α-linolenate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C13260

phytenate

C3387

stearate

C2774

pristanate

C3383

palmitate

C11482

(R)-pantoate

C2137

D-tagaturonate

C2021

aldehydo-D-galacturonate

C2047

aldehydo-D-glucuronate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3536

L-α-amino-ε-keto-pimelate

C5579

L-serine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C5581

L-proline

C5588

L-leucine

C5597

L-alanine

C5609

L-glutamine

C12067

glycine

C8797

D-glutamate

C5607

L-glutamate

C5605

L-histidine

C5642

L-arginine

C5584

L-lysine

C5573

L-tyrosine

C5643

L-asparagine

C5612

L-cysteine

C5577

L-threonine

C5575

L-tryptophan

C2469

L-phenylalanine

C8799

D-alanine

C12073

L-aspartyl-4-phosphate

C3402

3-phospho-L-serine

C5462

N-formyl-L-methionine

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C13322

N-carbamoyl-L-aspartate

C11975

N-α-acetyl lysine methyl ester

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C5603

L-isoleucine

C5571

L-valine

C12237

L-canaline

C2426

S-sulfo-L-cysteine

C12227

O-succinyl-L-homoserine

C12231

L-ornithine

C12239

L-aspartate 4-semialdehyde

C12229

O-phospho-L-homoserine

C12245

L-homoserine

C12203

S-adenosyl-L-homocysteine

C12233

L-glutamate-5-semialdehyde

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5583

L-methionine

C5595

L-cystathionine

C5580

L,L-diaminopimelate

C6090

methylglyoxal

C2040

diacetyl

C2858

glycolaldehyde

C3485

butan-1-al

C3483

formaldehyde

C3523

1-propanal

C3494

isobutanal

C3500

acetaldehyde

C14804

phytenal

C9494

D-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3449

butan-1-ol

C3450

ethanol

C3447

propan-1-ol

C14807

phytol

C3731

glycerol

C6261

(3R)-linalool

C6262

(3S)-linalool

C10527

myo-inositol

C6681

galactinol

C6679

D-galactosylononitol

C6255

D-ononitol

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C8321

geranyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C9077

(2E,6E)-farnesyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C10220

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C2258

phlorisovalerophenone

C2269

deoxyhumulone

C2261

4-prenylphlorisovalerophenone

C2266

deoxycohumulone

C4086

1-(β-D ribofuranosyl)nicotinamide

C10688

maltotriose

C10689

maltotetraose

C10690

maltopentaose

C10692

maltoheptaose

C10691

maltohexaose

C10693

sucrose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C8835

β-D-fructofuranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10381

a peptidoglycan dimer (mycobacteria)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C14595

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3126

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C10263

ADP-α-D-glucose

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3679

L-gulonate

C3678

aldehydo-L-galactonate

C7645

guanosine 2',3'-cyclic monophosphate

C7653

guanosine 3'-monophosphate

C7841

adenosine 2',3'-cyclic monophosphate

C7641

adenosine 3'-monophosphate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C9773

5-fluorocytosine

C4240

reduced β-nicotinamide D-ribonucleotide

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C1816

cyclic di-3',5'-adenylate

C1817

cyclic di-3',5'-guanylate