an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

anthranilate

2-maleylacetate

3-mercaptopyruvate

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

D-glucurono-6,3-lactone

tartronate semialdehyde

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

ethanolamine

orotidine 5'-phosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

N-acetyl-L-glutamate 5-semialdehyde

selenophosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

O-ureido-L-homoserine

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

(R)-1-amino-2-propanol O-2-phosphate

7,8-diaminopelargonate

dethiobiotin

(R)-pantothenate

canavaninosuccinate

L-canavanine

L-arginino-succinate

preuroporphyrinogen

nicotinate adenine dinucleotide

D-galacto-hexodialdose

oxalate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

quinolinate

1-phosphatidyl-myo-inositol

1-phosphatidyl-myo-inositol 2-mannose

α-D-glucosamine 1-phosphate

xanthine

isoquinoline

isoquinolin-2(1H)-one

5-carboxymethyl-2-hydroxymuconate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

N-(5-phosphoribosyl)-anthranilate

5-phospho-β-D-ribosylamine

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropylmalate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

lipid X

formamide

3-hydroxy-3-methylglutarate

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

acetyl phosphate

pimeloyl-CoA

8-amino-7-oxononanoate

(E)-3-(methoxycarbonyl)pent-2-enedioate

citrate

acetoacetate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

L-selenocystathionine

dibenzo[1,4]dioxin-2,3-dione

β-D-fructose 2,6-bisphosphate

S-formylglutathione

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

4,5-dihydroxyphthalate

1-piperideine-2-carboxylate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

3'-phosphoadenylyl-sulfate

2-aminomalonate semialdehyde

3-oxopropanoate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

nicotine-1'-N-oxide

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-2,3,4,5-tetrahydrodipicolinate

lipid A disaccharide (E. coli)

lipid IV_A

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

hydrogen selenide

O-acetyl-L-serine

5-enolpyruvoyl-shikimate 3-phosphate

L-histidinol phosphate

prephenate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-demethylubiquinol-6

2-phosphoglycolate

glycolate

(R)-6-hydroxynicotine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

3-methyl-2-oxobutanoate

2-dehydropantoate

carbonic acid

L-pipecolate

1-piperideine 6-carboxylate

succinate semialdehyde

hydroxypyruvate

(S)-dihydroorotate

carbamoyl phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(S)-4-amino-5-oxopentanoate

3-dehydroshikimate

γ-L-glutamyl 5-phosphate

isopentenyl diphosphate

enol-phenylpyruvate

6-aminohexanoate linear dimer

6-aminohexanoate

5-hydroxyferulate

5-hydroxy-feruloyl-CoA

sinapate

sinapoyl-CoA

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

4-methylaminobutanoate

4-aminobutanoate

4'-phosphopantetheine

(S)-6-hydroxynicotine

glutathione disulfide

4-hydroxy-2-nonenal

(S)-2-amino-6-oxohexanoate

4-amino-4-deoxychorismate

N-acetylglutamyl-phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

phosphoenolpyruvate

1-pyrroline-2-carboxylate

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

shikimate

shikimate 3-phosphate

5-aminolevulinate

porphobilinogen

meso-tartrate

2-hydroxy-3-oxosuccinate

methylsalicylate

salicyl alcohol

(S)-ureidoglycolate

urea

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(-)-ephedrine

(R)-2-methylimino-1-phenylpropan-1-ol

pseudouridine 5'-phosphate

arsenite

2-keto-D-gluconate

2,5-didehydro-D-gluconate

L-tartrate

oxaloacetate

2-dehydro-3-deoxy-D-gluconate

dihydrochelirubine

dihydromacarpine

macarpine

dihydrosanguinarine

sanguinarine

coproporphyrinogen III

glycerone phosphate

histidinal

histidinol

S-ribosyl-L-homocysteine

H₂

hydrogen peroxide

thiamine phosphate

3-hydroxypropanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-phosphooxypyruvate

indole-3-ethanol

H₂O

oxalosuccinate

CO₂

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

ammonia

α-D-galacturonate 1-phosphate

pseudouridine

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

6-aminohexanoate cyclic dimer

6-oxohexanoate

adipate

selenodiglutathione

glutathioselenol

autoinducer 2

2-amino-3-carboxymuconate-6-semialdehyde

2-iminoacetate

4-amino-2-methyl-5-pyrimidinemethanol

N⁵-carboxyaminoimidazole ribonucleotide

2-dehydro-6-phospho-D-gluconate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

4-maleyl-acetoacetate

homogentisate

carbon monoxide

1-deoxy-L-glycero-tetrulose 4-phosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

4-fumaryl-acetoacetate

3-ureidopropanoate

5-oxo-L-proline

malonate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

prephytoene diphosphate

DNA without lesion

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

(L-threonylcarbamoyl)adenylate

ectoine

(2S)-4-acetamido-2-aminobutanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide-GDP

adenosylcobinamide

adenosyl-cobinamide phosphate

cobalt-precorrin-2

cobalt-sirohydrochlorin

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cobalt-factor III

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-5A

cobyrinate

cob(II)yrinate a,c-diamide

cobalt-precorrin-3

cobalt-precorrin-4

protoheme

hydrogen cyanide

N₂

nitrous oxide

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

hydrogen sulfide

oxygen

S⁰

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-β-neuraminate 9-phosphate

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

dimethyl sulfide

methanethiol

glutathione

thiocyanate

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

coenzyme M

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

Fe³⁺

K⁺

Na⁺

H⁺

ammonium

Ca²⁺

Cd²⁺

Mg²⁺

Co²⁺

Fe²⁺

Cu²⁺

trimethyl sulfonium

selenide

arsenate

thiosulfate

nitrite

nitrate

selenite

selenate

sulfite

hydrogencarbonate

molybdate

sulfate

OH^-

hydrogensulfite

phosphonate

phosphate

triphosphate

diphosphate

fluoride

chloride

bromide

N¹,N¹²-diacetylspermine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

N¹-acetylspermine

N¹-acetylspermidine

putrescine

spermidine

betaine aldehyde hydrate

choline

betaine aldehyde

glycine betaine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

1-oleoyl-2-palmitoyl-phosphatidylglycerol

fluoroacetate

(S)-2-chloropropanoate

bromochloromethane

allantoate

acetamide

6-caprolactam

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

ethene

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

26,27-dehydrozymosterol

24-alkyl sterol 1

3-dehydrocholate

isocholate

glycocholate

cholate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

linoleoyl-CoA

α-linolenoyl-CoA

formyl-CoA

oxalyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

trans-caffeoyl-CoA

malonyl-CoA

3'-dephospho-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

succinyl-CoA

acetyl-CoA

3-hydroxypropanoyl-CoA

dihomo γ-linolenoyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

acryloyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

propanoyl-CoA

butanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

icosanoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

N,N-dimethylglycine

FAD

FMN

FADH₂

FMNH₂

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

coenzyme A

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

nicotinate

riboflavin

L-ascorbate

thiamine

pyridoxine

pyridoxal

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

guanosine

inosine

xanthosine

adenosine

dGMP

dAMP

dITP

dATP

dGTP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

IMP

GMP

AMP

ITP

GTP

ATP

dTDP

dTTP

dTMP

dUTP

dUMP

dCTP

CTP

dCMP

dUDP

dCDP

CDP

UDP

UTP

uracil

5,6-dihydrouracil

5,6-dihydrothymine

orotate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galacturonate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

thymine

UMP

CMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

(indole-3-yl)acetonitrile

acrylonitrile

preQ₀

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

urate

4-hydroxybenzoate

3-methoxy-4-hydroxyphenylglycol

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

4-methylphenol

catechol

protocatechuate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

4-coumarate

trans-caffeate

salicylate

4-aminobenzoate

chorismate

(3E)-2-oxohex-3-enedioate

maleate

fumarate

L-aspartate

succinate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

trans-aconitate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

(R)-2-hydroxybutanoate

(R)-3-hydroxybutanoate

(R)-lactate

propanoate

pyruvate

formate

acetate

butanoate

octanoate

decanoate

laurate

(15Z)-tetracosenoate

oleate

linoleate

di-homo-γ-linolenate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

pristanate

arachidate

myristate

stearate

palmitate

D-gluconate

(R)-pantoate

D-tagaturonate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-leucine

glycine

L-alanine

L-glutamine

L-proline

D-glutamate

L-glutamate

L-arginine

L-histidine

L-lysine

L-tyrosine

L-threonine

L-asparagine

L-cysteine

L-phenylalanine

L-tryptophan

D-alanine

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

alanopine

L-saccharopine

D-nopaline

sarcosine

N-methyl-L-tryptophan

N⁶-methyl-L-lysine

D-lysopine

D-octopine

N-carbamoylglycine

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

O-phospho-L-homoserine

L-homoserine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

hypoglycin A

L-ornithine

L-homocysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-succinyl-L-homoserine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L,L-diaminopimelate

L-2,4-diaminobutanoate

methylglyoxal

diacetyl

6-hydroxypseudooxynicotine

(R)-acetoin

3-acetamidopropanal

glycolaldehyde

isobutanal

1-propanal

formaldehyde

acetaldehyde

butan-1-al

phytenal

D-glyceraldehyde

L-glyceraldehyde

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-galactopyranose

propan-1-ol

methanol

ethanol

butan-1-ol

phytol

glycerol

xylitol

D-altritol

D-Iditol

galactitol

D-mannitol

ethylene glycol

(R,R)-2,3-butanediol

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

15-cis-phytoene

all-trans-phytoene

geranyl diphosphate

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenol

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

(S)-nicotine

betanidin

betanidin quinone

chelirubine

1-(β-D ribofuranosyl)nicotinamide

sucrose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

keto-D-sorbose

keto-D-psicose

keto-D-tagatose

β-D-fructofuranose

L-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

D-altronate

aldehydo-L-galactonate

adenylo-succinate

5'-deoxyadenosine

pppGpp

ppGpp

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

8-oxo-GTP

8-oxo-dGTP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B